Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_E19
(397 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64853-1|AAB04974.2| 517|Caenorhabditis elegans Hypothetical pr... 43 7e-05
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 42 2e-04
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 42 2e-04
U53344-6|AAK77632.2| 702|Caenorhabditis elegans Hypothetical pr... 41 4e-04
AF016450-8|AAB65993.1| 578|Caenorhabditis elegans Hypothetical ... 39 0.001
X75331-1|CAA53080.1| 620|Caenorhabditis elegans acetylcholinest... 39 0.001
U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal acetyl... 39 0.001
AF016437-3|AAB65885.2| 405|Caenorhabditis elegans Hypothetical ... 39 0.001
U39743-4|AAA80438.4| 581|Caenorhabditis elegans Hypothetical pr... 37 0.005
AC024859-7|AAK29968.1| 550|Caenorhabditis elegans Hypothetical ... 36 0.008
X66104-1|CAA46899.1| 557|Caenorhabditis elegans esterase protein. 35 0.018
AF016450-3|AAB65992.3| 811|Caenorhabditis elegans Hypothetical ... 35 0.018
AF016450-2|AAB65983.1| 545|Caenorhabditis elegans Hypothetical ... 35 0.018
AF016437-2|AAB65887.1| 554|Caenorhabditis elegans Hypothetical ... 35 0.018
U97549-7|AAB52848.3| 565|Caenorhabditis elegans Hypothetical pr... 34 0.032
M96145-1|AAA28057.1| 562|Caenorhabditis elegans elastase protein. 33 0.074
AF016680-3|AAB66165.2| 562|Caenorhabditis elegans Abnormal gut ... 33 0.074
AC006621-2|AAK68262.2| 544|Caenorhabditis elegans Hypothetical ... 33 0.074
AF016679-3|AAB66160.1| 578|Caenorhabditis elegans Hypothetical ... 32 0.13
AF016679-2|AAB66159.1| 658|Caenorhabditis elegans Hypothetical ... 32 0.13
AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical ... 32 0.17
AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical ... 32 0.17
AC006621-1|AAK68261.2| 545|Caenorhabditis elegans Hypothetical ... 31 0.23
U53336-2|AAA96175.1| 571|Caenorhabditis elegans Hypothetical pr... 29 0.91
AF016679-1|AAB66162.1| 539|Caenorhabditis elegans Hypothetical ... 28 2.1
Z81112-3|CAB03273.1| 656|Caenorhabditis elegans Hypothetical pr... 28 2.8
AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical ... 28 2.8
AF022977-3|AAB88609.1| 554|Caenorhabditis elegans Hypothetical ... 27 3.7
Z47357-11|CAA87428.3| 303|Caenorhabditis elegans Hypothetical p... 27 4.9
Z30662-12|CAA83142.3| 303|Caenorhabditis elegans Hypothetical p... 27 4.9
AF026215-7|ABR92608.1| 554|Caenorhabditis elegans Hypothetical ... 27 4.9
AF026215-6|AAB71325.1| 516|Caenorhabditis elegans Hypothetical ... 27 4.9
U50312-10|AAY86208.1| 356|Caenorhabditis elegans Hypothetical p... 27 6.4
>U64853-1|AAB04974.2| 517|Caenorhabditis elegans Hypothetical
protein K11G9.3 protein.
Length = 517
Score = 43.2 bits (97), Expect = 7e-05
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVAYDPIGHAKL---FGARLSYTGKTPQ 179
GAA VDLL +SP S++L ++ I +SG AL +AV AK+ F L Y G Q
Sbjct: 177 GAACVDLLALSPHSRDLFNRVIVMSGGALCEYAVR-TANSQAKVCYEFARHLGYDGTNSQ 235
Query: 180 QLATLLKT 203
L +K+
Sbjct: 236 TLFNWMKS 243
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQ---NLIHKAISLSGSALAPWAVAYDP 122
GA+LV LL SP +Q L +AI L GSAL+PWA++ +P
Sbjct: 235 GASLVSLLMASPLTQPGRRLFRRAILLDGSALSPWAISQNP 275
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQ---NLIHKAISLSGSALAPWAVAYDP 122
GA+LV LL SP +Q L +AI L GSAL+PWA++ +P
Sbjct: 235 GASLVSLLMASPLTQPGRRLFRRAILLDGSALSPWAISQNP 275
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQ---NLIHKAISLSGSALAPWAVAYDP 122
GA+LV LL SP +Q L +AI L GSAL+PWA++ +P
Sbjct: 235 GASLVSLLMASPLTQPGRRLFRRAILLDGSALSPWAISQNP 275
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 41.5 bits (93), Expect = 2e-04
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQ---NLIHKAISLSGSALAPWAVAYDP 122
GA+LV LL SP +Q L +AI L GSAL+PWA++ +P
Sbjct: 235 GASLVSLLMASPLTQPGRRLFRRAILLDGSALSPWAISQNP 275
>U53344-6|AAK77632.2| 702|Caenorhabditis elegans Hypothetical
protein T07H6.1a protein.
Length = 702
Score = 40.7 bits (91), Expect = 4e-04
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAV 110
G A LL +SP++ L+H+AI +SGS++A WA+
Sbjct: 222 GGAASSLLALSPKTSGLLHQAIIMSGSSMAGWAI 255
>AF016450-8|AAB65993.1| 578|Caenorhabditis elegans Hypothetical
protein B0238.7 protein.
Length = 578
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVAYD--PIGHAKLFGARLSYTGKTPQQ 182
GA D L++SP S L ++IS+SG+A +A+ +G K F YTG Q
Sbjct: 229 GATSTDFLSLSPHSNQLFQRSISMSGTAFCNFAIRPKDVEVGVCKEFAQFQGYTGTDSQS 288
Query: 183 L 185
L
Sbjct: 289 L 289
>X75331-1|CAA53080.1| 620|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 620
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAV 110
GAA V + +SP+S H+AI SGSA +PWA+
Sbjct: 218 GAASVSIHMLSPKSAPYFHRAIIQSGSATSPWAI 251
>U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal
acetylcholinesterase protein1 protein.
Length = 620
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAV 110
GAA V + +SP+S H+AI SGSA +PWA+
Sbjct: 218 GAASVSIHMLSPKSAPYFHRAIIQSGSATSPWAI 251
>AF016437-3|AAB65885.2| 405|Caenorhabditis elegans Hypothetical
protein F13H6.4 protein.
Length = 405
Score = 38.7 bits (86), Expect = 0.001
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVAYDPIGHAKLFGARLSYTGKTPQQLA 188
G A DLL++SP S++L + I +SGSA +A+ AK+F + G T
Sbjct: 91 GGASTDLLSLSPHSRDLFQRFIPISGSAYCEFALRTSK-SQAKIFREFAEFKGFTGGDST 149
Query: 189 TLLK 200
TLL+
Sbjct: 150 TLLE 153
>U39743-4|AAA80438.4| 581|Caenorhabditis elegans Hypothetical
protein R173.3 protein.
Length = 581
Score = 37.1 bits (82), Expect = 0.005
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAV 110
GAA LL +SPR++ L K + +SGSAL P V
Sbjct: 221 GAASASLLALSPRAEGLFQKVLLMSGSALQPGVV 254
>AC024859-7|AAK29968.1| 550|Caenorhabditis elegans Hypothetical
protein Y71H2AM.13 protein.
Length = 550
Score = 36.3 bits (80), Expect = 0.008
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVAYDPI 125
G A VD L++SP S++L K I + G+A WA+ P+
Sbjct: 208 GGASVDFLSISPVSRDLFQKVIPMGGNASCSWAIHPRPL 246
>X66104-1|CAA46899.1| 557|Caenorhabditis elegans esterase protein.
Length = 557
Score = 35.1 bits (77), Expect = 0.018
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVAYDPIGHAKLFGARLSYTGKTPQQLA 188
G A DLL++SP S++L + I +SG+A +A+ AK+F + G + + +
Sbjct: 210 GGASTDLLSLSPHSRDLFQRFIPISGTAHCDFAIRASE-NQAKIFREFAEFHGFSGRDSS 268
Query: 189 TLLK 200
L K
Sbjct: 269 ALFK 272
>AF016450-3|AAB65992.3| 811|Caenorhabditis elegans Hypothetical
protein B0238.13 protein.
Length = 811
Score = 35.1 bits (77), Expect = 0.018
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAV 110
G A VD L++SP + HK I +SG+A P+ +
Sbjct: 538 GGASVDFLSLSPHANKYFHKFIPMSGAATCPFGI 571
Score = 33.1 bits (72), Expect = 0.074
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAV 110
G A VDLL++SP S H+ I +S +A P ++
Sbjct: 211 GGASVDLLSLSPHSNKYFHRFIPMSATAYCPISI 244
>AF016450-2|AAB65983.1| 545|Caenorhabditis elegans Hypothetical
protein B0238.1 protein.
Length = 545
Score = 35.1 bits (77), Expect = 0.018
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAV 110
G A VD L++SP + HK I +SG+A P+ +
Sbjct: 213 GGASVDFLSLSPHANKYFHKFIPMSGAATCPFGI 246
>AF016437-2|AAB65887.1| 554|Caenorhabditis elegans Hypothetical
protein F13H6.3 protein.
Length = 554
Score = 35.1 bits (77), Expect = 0.018
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVAYDPIGHAKLFGARLSYTGKTPQQLA 188
G A DLL++SP S++L + I +SG+A +A+ AK+F + G + + +
Sbjct: 210 GGASTDLLSLSPHSRDLFQRFIPISGTAHCDFAIRASE-NQAKIFREFAEFHGFSGRDSS 268
Query: 189 TLLK 200
L K
Sbjct: 269 ALFK 272
>U97549-7|AAB52848.3| 565|Caenorhabditis elegans Hypothetical
protein F15A8.6 protein.
Length = 565
Score = 34.3 bits (75), Expect = 0.032
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWA 107
G VDLL++SP S++L H+ + ++G+ W+
Sbjct: 217 GGVSVDLLSLSPHSRDLFHQVVPMAGNGECEWS 249
>M96145-1|AAA28057.1| 562|Caenorhabditis elegans elastase protein.
Length = 562
Score = 33.1 bits (72), Expect = 0.074
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVAYDPIGHAK 137
GAA V LTMSP +++ KAI +S S+ WA + + +K
Sbjct: 200 GAASVSQLTMSPYTRDSYSKAIIMSASSFVGWATGPNVVETSK 242
>AF016680-3|AAB66165.2| 562|Caenorhabditis elegans Abnormal gut
esterase protein 1 protein.
Length = 562
Score = 33.1 bits (72), Expect = 0.074
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVAYDPIGHAK 137
GAA V LTMSP +++ KAI +S S+ WA + + +K
Sbjct: 200 GAASVSQLTMSPYTRDSYSKAIIMSASSFVGWATGPNVVETSK 242
>AC006621-2|AAK68262.2| 544|Caenorhabditis elegans Hypothetical
protein C52A10.2 protein.
Length = 544
Score = 33.1 bits (72), Expect = 0.074
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVAYDPIGHA--KLFGARLSYTGKTPQQ 182
G A VD L++SP + K I +SG+A P+ + + + F YTG +
Sbjct: 212 GGASVDFLSLSPHANKYFQKFIPMSGAATCPFGIRSKDVEGLIFREFANHHGYTGNDSKS 271
Query: 183 LATLLKTTD 209
L ++ D
Sbjct: 272 LLQWYQSQD 280
>AF016679-3|AAB66160.1| 578|Caenorhabditis elegans Hypothetical
protein T28C12.4b protein.
Length = 578
Score = 32.3 bits (70), Expect = 0.13
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVA--YDPIGHAKLFGARLSY 161
GAA DLL+ SP ++ L + I + G++ WA +D + K + RL +
Sbjct: 207 GAAAADLLSFSPLTKGLFKRKIVMGGNSYCHWATTSNHDIREYCKKWAKRLGW 259
>AF016679-2|AAB66159.1| 658|Caenorhabditis elegans Hypothetical
protein T28C12.4a protein.
Length = 658
Score = 32.3 bits (70), Expect = 0.13
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVA--YDPIGHAKLFGARLSY 161
GAA DLL+ SP ++ L + I + G++ WA +D + K + RL +
Sbjct: 287 GAAAADLLSFSPLTKGLFKRKIVMGGNSYCHWATTSNHDIREYCKKWAKRLGW 339
>AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical
protein F56C11.6b protein.
Length = 431
Score = 31.9 bits (69), Expect = 0.17
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAV 110
G A VDLL +SP S+ L ++AI ++G+ +A+
Sbjct: 91 GGASVDLLCLSPHSRGLFNRAIPMAGNGECDFAM 124
>AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical
protein F56C11.6a protein.
Length = 548
Score = 31.9 bits (69), Expect = 0.17
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAV 110
G A VDLL +SP S+ L ++AI ++G+ +A+
Sbjct: 208 GGASVDLLCLSPHSRGLFNRAIPMAGNGECDFAM 241
>AC006621-1|AAK68261.2| 545|Caenorhabditis elegans Hypothetical
protein C52A10.1 protein.
Length = 545
Score = 31.5 bits (68), Expect = 0.23
Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAV--AYDPIGHAKLFGARLSYTGKTPQQ 182
G LL +SP S L H+ +++SGSA +++ + F Y G+ +
Sbjct: 211 GGVSAGLLALSPHSNKLFHRFMAMSGSAFCEFSIRTKEQEAEIFRNFAKHHGYEGEDSES 270
Query: 183 LATLLKTTDINLMATTLDGTQFTNNTLLFAP 275
L K+ ++ T + + L F P
Sbjct: 271 LLEWYKSQPLSKFQETATFEKKASGFLTFIP 301
>U53336-2|AAA96175.1| 571|Caenorhabditis elegans Hypothetical
protein K07C11.4 protein.
Length = 571
Score = 29.5 bits (63), Expect = 0.91
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGS 89
GAA V L SP S +L +AI LSGS
Sbjct: 213 GAASVSALLYSPHSDHLFSQAIQLSGS 239
>AF016679-1|AAB66162.1| 539|Caenorhabditis elegans Hypothetical
protein T28C12.5 protein.
Length = 539
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGSALAPWA 107
GAA LL+ SP ++ L + I + G++ WA
Sbjct: 183 GAAAAGLLSFSPLTKGLFKRKIVMGGNSYCHWA 215
>Z81112-3|CAB03273.1| 656|Caenorhabditis elegans Hypothetical
protein T02B5.3 protein.
Length = 656
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSG 86
GA +V T+SP ++ LIH+ I +SG
Sbjct: 218 GAGVVAAFTISPLTKGLIHQQIVMSG 243
>AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical
protein Y75B8A.3 protein.
Length = 827
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 9 GAALVDLLTMSPRSQNLIHKAISLSGS 89
GA V +SP SQNL ++AI SGS
Sbjct: 228 GACAVSAHCLSPMSQNLFNQAIVQSGS 254
>AF022977-3|AAB88609.1| 554|Caenorhabditis elegans Hypothetical
protein ZK994.1 protein.
Length = 554
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 312 VLLDAPINLLRSGNFSHIPYIAGYTTRE 395
+L D P +L SGNF IP + G E
Sbjct: 308 LLRDEPRRILESGNFKKIPLLIGTVPHE 335
>Z47357-11|CAA87428.3| 303|Caenorhabditis elegans Hypothetical
protein T16H12.9 protein.
Length = 303
Score = 27.1 bits (57), Expect = 4.9
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 47 ISKSYTQSYISQWICPSSMGCCLRSYRSCKI 139
+ +Y YI++ +C ++ CL Y +C +
Sbjct: 214 LPSNYRPQYINELVCDNTDSDCLSGYATCSV 244
>Z30662-12|CAA83142.3| 303|Caenorhabditis elegans Hypothetical
protein T16H12.9 protein.
Length = 303
Score = 27.1 bits (57), Expect = 4.9
Identities = 8/31 (25%), Positives = 17/31 (54%)
Frame = +2
Query: 47 ISKSYTQSYISQWICPSSMGCCLRSYRSCKI 139
+ +Y YI++ +C ++ CL Y +C +
Sbjct: 214 LPSNYRPQYINELVCDNTDSDCLSGYATCSV 244
>AF026215-7|ABR92608.1| 554|Caenorhabditis elegans Hypothetical
protein F09G2.8b protein.
Length = 554
Score = 27.1 bits (57), Expect = 4.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = -1
Query: 271 ANNRVLFVNCVPSSVVAIKLISVVF 197
+ NR++ CVP S+V++ +I++VF
Sbjct: 116 SRNRIIKPACVPISIVSLFIIALVF 140
>AF026215-6|AAB71325.1| 516|Caenorhabditis elegans Hypothetical
protein F09G2.8 protein.
Length = 516
Score = 27.1 bits (57), Expect = 4.9
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = -1
Query: 271 ANNRVLFVNCVPSSVVAIKLISVVF 197
+ NR++ CVP S+V++ +I++VF
Sbjct: 78 SRNRIIKPACVPISIVSLFIIALVF 102
>U50312-10|AAY86208.1| 356|Caenorhabditis elegans Hypothetical
protein B0222.11 protein.
Length = 356
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/46 (21%), Positives = 23/46 (50%)
Frame = +2
Query: 47 ISKSYTQSYISQWICPSSMGCCLRSYRSCKIVRS*IKLYRKNSATI 184
+ +Y +Y+++ +C + CL Y SC+ + + R +S +
Sbjct: 256 LPSTYYPAYLNEVVCDYADTSCLSGYASCQTGTQQLNVLRNDSGKL 301
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,380,227
Number of Sequences: 27780
Number of extensions: 152986
Number of successful extensions: 307
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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