Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_E19
         (397 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    48   5e-08
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           48   5e-08
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           33   0.001
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    28   0.045
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    28   0.045
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    22   2.9  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    22   2.9  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   3.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    20   9.0  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 47.6 bits (108), Expect = 5e-08
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 3/132 (2%)
 Frame = +3

Query: 9   GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVAYDPIGHAKLFGARLSYTGKTPQQLA 188
           G A V    +SP S  L    IS+SG+AL  W    + +  AK  GA +    +  +++ 
Sbjct: 211 GGASVHYHYLSPLSAGLFQGGISISGTALNCWTQTENSLEKAKQVGAFMGCPTRNVKEMI 270

Query: 189 TLLKTTDINLMATTLDGTQ--FTNNTLLFAPCXXXXXXXXXXTVLLD-APINLLRSGNFS 359
             L+      +  TL      + N    F P              +D  PI ++ SG+  
Sbjct: 271 RCLRYRPARAIVETLANFMRFYYNPFTPFGPVTEKVNNDSNSLPFIDRTPIEIINSGDVQ 330

Query: 360 HIPYIAGYTTRE 395
            +P++ G T+ E
Sbjct: 331 DVPWVTGVTSEE 342


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 47.6 bits (108), Expect = 5e-08
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 3/132 (2%)
 Frame = +3

Query: 9   GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVAYDPIGHAKLFGARLSYTGKTPQQLA 188
           G A V    +SP S  L    IS+SG+AL  W    + +  AK  GA +    +  +++ 
Sbjct: 211 GGASVHYHYLSPLSAGLFQGGISISGTALNCWTQTENSLEKAKQVGAFMGCPTRNVKEMI 270

Query: 189 TLLKTTDINLMATTLDGTQ--FTNNTLLFAPCXXXXXXXXXXTVLLD-APINLLRSGNFS 359
             L+      +  TL      + N    F P              +D  PI ++ SG+  
Sbjct: 271 RCLRYRPARAIVETLANFMRFYYNPFTPFGPVTEKVNNDSNSLPFIDRTPIEIINSGDVQ 330

Query: 360 HIPYIAGYTTRE 395
            +P++ G T+ E
Sbjct: 331 DVPWVTGVTSEE 342


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 33.1 bits (72), Expect = 0.001
 Identities = 21/75 (28%), Positives = 33/75 (44%)
 Frame = +3

Query: 9   GAALVDLLTMSPRSQNLIHKAISLSGSALAPWAVAYDPIGHAKLFGARLSYTGKTPQQLA 188
           G A V    +SP S  L    IS+SG+AL  W    + +  AK  GA +    +  +++ 
Sbjct: 82  GGASVHYHYLSPLSAGLFQGGISISGTALNCWTQTENSLEKAKQVGAFMGCPTRNVKEMI 141

Query: 189 TLLKTTDINLMATTL 233
             L+      +  TL
Sbjct: 142 RCLRYRPARAIVETL 156


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 27.9 bits (59), Expect = 0.045
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 9   GAALVDLLTMSPRSQNLIHKAISLSGSALAPWA 107
           G + V L  +SP ++ L+ + I  SG+  APW+
Sbjct: 255 GGSSVSLHLISPVTRGLVRRGILQSGTLNAPWS 287


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 27.9 bits (59), Expect = 0.045
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 9   GAALVDLLTMSPRSQNLIHKAISLSGSALAPWA 107
           G + V L  +SP ++ L+ + I  SG+  APW+
Sbjct: 255 GGSSVSLHLISPVTRGLVRRGILQSGTLNAPWS 287


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +2

Query: 107 CCLRSYRSCKIVRS*IKLYRKNSATIGYIIKNY*YQFNGYYTRWYTIHKQ 256
           C L++ R+C +++        +   I  IIK+   +   Y  R + I +Q
Sbjct: 37  CVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITRYIIRMFLISQQ 86


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = +2

Query: 107 CCLRSYRSCKIVRS*IKLYRKNSATIGYIIKNY*YQFNGYYTRWYTIHKQ 256
           C L++ R+C +++        +   I  IIK+   +   Y  R + I +Q
Sbjct: 20  CVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITRYIIRMFLISQQ 69


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +2

Query: 155 KLYRKNSATIGYIIKNY*YQFNGYYTRWYTIHKQYSI 265
           K+    S    Y   NY Y +N Y  + Y  +K Y I
Sbjct: 313 KIISSLSNNYNYNNNNYKYNYNNYNKKLY--YKNYII 347


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 30  LTMSPRSQNLIHKAIS 77
           + +SP +QNL + A+S
Sbjct: 254 MALSPLTQNLYYSALS 269


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,496
Number of Sequences: 438
Number of extensions: 1882
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)