Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_E18
(368 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 153 4e-38
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 151 1e-37
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 36 0.013
10_02_0199 + 6668902-6669293,6669825-6669882 31 0.21
11_04_0281 + 15733505-15733647,15734366-15734443,15734835-157350... 30 0.49
07_03_1721 - 29023979-29025295 29 0.86
05_05_0047 + 21860127-21860735,21862600-21863451 29 1.1
06_03_0865 - 25516072-25517007 29 1.5
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 28 2.0
12_02_0803 + 23318429-23318552,23318688-23319877,23320724-233215... 28 2.6
03_06_0628 - 35179951-35180265,35180653-35180889,35180982-351811... 28 2.6
11_01_0342 + 2548147-2548275,2548385-2548425,2548521-2548570,254... 27 3.5
06_03_0589 - 22572914-22573035,22573353-22573412,22573554-22573692 27 3.5
05_01_0224 - 1662818-1663033,1663183-1663266,1663315-1663434,166... 27 3.5
04_01_0588 + 7657510-7657992,7658397-7658843 27 3.5
03_01_0194 + 1545144-1545803,1546199-1546234 27 3.5
03_01_0092 - 731069-731434,731569-733080 27 3.5
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 27 3.5
12_02_1174 - 26696869-26698191 27 4.6
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 27 4.6
11_05_0039 + 18531669-18531993,18534352-18534411,18534417-18534661 27 4.6
02_04_0518 + 23601355-23602498,23603481-23603779 27 4.6
05_01_0442 - 3500849-3500866,3500950-3501027,3501260-3501352,350... 27 6.1
02_03_0313 - 17590109-17590148,17590254-17590382,17590479-175906... 27 6.1
02_03_0293 - 17372071-17372217,17372301-17372471,17373334-173734... 27 6.1
01_01_0715 - 5542648-5543219,5543352-5543544 27 6.1
01_01_0077 - 585670-585787,585921-586687 27 6.1
04_04_1190 + 31593727-31593847,31593965-31593996 26 8.1
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 26 8.1
02_04_0457 + 23093020-23093343,23093798-23093806 26 8.1
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 153 bits (371), Expect = 4e-38
Identities = 67/120 (55%), Positives = 81/120 (67%)
Frame = +3
Query: 9 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGTMCRGGRIFAPTKPWRRWHXXXXXXX 188
HQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFG MCRGGR+FAPTK WR+WH
Sbjct: 64 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHL 123
Query: 189 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSD 368
ARGH +E +PELPLV+SD + I KT QA+ L+++ A++D
Sbjct: 124 RRVAVASALAATSVPSLVLARGHRIETVPELPLVISDSAESIEKTSQAIKILKQVGAYAD 183
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 151 bits (367), Expect = 1e-37
Identities = 68/120 (56%), Positives = 81/120 (67%)
Frame = +3
Query: 9 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGTMCRGGRIFAPTKPWRRWHXXXXXXX 188
HQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFG MCRGGR+FAPTK WRRWH
Sbjct: 63 HQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRL 122
Query: 189 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSD 368
ARGH +E +PE PLVVSD ++ I KT Q++ L++I A++D
Sbjct: 123 RRIAVASALAATAVPSLVLARGHRIEGVPEFPLVVSDSIESIEKTAQSIKVLKQIGAYAD 182
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 35.5 bits (78), Expect = 0.013
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = -2
Query: 127 PPRHMVPNAPCPDLWVPPP 71
PPRH+VP P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 31.5 bits (68), Expect = 0.21
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +3
Query: 21 AESWGTGRAVARIPRVRGGGTHRSGQGAFGTMCRGGR 131
A+SW TGRA A + R R GG R A G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>11_04_0281 +
15733505-15733647,15734366-15734443,15734835-15735077,
15735868-15736012,15736234-15736293,15736376-15736471,
15736651-15737067,15737824-15737964,15738043-15738213,
15738394-15738651,15738741-15738889,15739060-15739557,
15740147-15740420,15740631-15740696,15740891-15741057,
15741413-15741497,15741673-15741732
Length = 1016
Score = 30.3 bits (65), Expect = 0.49
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 195 HVSAVGSRDGASASTAWSARRYVRRGTWYRM 103
HVSA+ DG + T + R + GTW +M
Sbjct: 905 HVSAINEEDGINCDTITMSERRLASGTWSQM 935
>07_03_1721 - 29023979-29025295
Length = 438
Score = 29.5 bits (63), Expect = 0.86
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 154 HGLVGAKIRPPRHMVPNAPCPDLWVP-PPRTRGIRATARPV 35
+G+VG PP H +P P P P P GI A A PV
Sbjct: 227 NGIVGHSGVPPMHPIPCFPGPPFVYPWSPAWNGIPAMAPPV 267
>05_05_0047 + 21860127-21860735,21862600-21863451
Length = 486
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 101 CIRYHVPRRTYLRADQAVEALAPSREPTAETCC 199
C+ Y VPR+TY + + EAL S A C
Sbjct: 322 CVTYSVPRKTYGMSSRLPEALTASPVKAAVALC 354
>06_03_0865 - 25516072-25517007
Length = 311
Score = 28.7 bits (61), Expect = 1.5
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = -3
Query: 312 SPGPCPRPLTATRESSQQYAL*PEXXXXXXXXXXXXXRQHVSAVGSRDG 166
SP P P P A S+ QY PE +++++VG R G
Sbjct: 233 SPSPPPPPPPAAAASTTQYPFTPEFAAAMQEMIRAEVHKYMASVGVRAG 281
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
Frame = -1
Query: 233 RYPGRCHGGG---HGSTSLP*VHATVPAPPRLGRRE 135
R+ HGG HG L HA P PP+ RR+
Sbjct: 47 RHEHPAHGGAQHAHGGEQLQLAHARTPTPPQQQRRQ 82
>12_02_0803 +
23318429-23318552,23318688-23319877,23320724-23321528,
23321938-23322417,23322535-23322815,23323207-23323302,
23323423-23323548,23324100-23325890
Length = 1630
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 166 CQRLHGLVGAKIRPPRHMVPNAPC 95
C L+G VG IRP + + PN C
Sbjct: 256 CSHLNGPVGHDIRPIKRLKPNQEC 279
>03_06_0628 -
35179951-35180265,35180653-35180889,35180982-35181140,
35181673-35181864,35182696-35182983,35183289-35183342,
35183561-35183671,35183780-35184011,35184097-35184302
Length = 597
Score = 27.9 bits (59), Expect = 2.6
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 127 PPRHMVPNAPCPDLWVPPPRTRGIRATARP 38
PPRH P P PR RG A ARP
Sbjct: 14 PPRHCARRPRAPPTTAPRPR-RGCAAAARP 42
>11_01_0342 +
2548147-2548275,2548385-2548425,2548521-2548570,
2548830-2548974,2549854-2549859,2550122-2550245,
2550422-2550877,2550960-2551013
Length = 334
Score = 27.5 bits (58), Expect = 3.5
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 178 TYGRDVL-PWPPPWQRPGYRPSFRLEGILLRR 270
TYG +L P+PPP P PS+ EG ++ R
Sbjct: 275 TYGTPLLQPFPPPTPPPSLTPSYN-EGPIISR 305
>06_03_0589 - 22572914-22573035,22573353-22573412,22573554-22573692
Length = 106
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 91 LGRVHSVPCAAADVSSRRPS 150
+G H +P A+ADV+SRRP+
Sbjct: 58 MGSGHPLPGASADVASRRPA 77
>05_01_0224 -
1662818-1663033,1663183-1663266,1663315-1663434,
1664527-1664655,1664743-1664988
Length = 264
Score = 27.5 bits (58), Expect = 3.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 202 WPPPWQRPGYRPSFRLEGILLRR 270
WPPP P P L+GIL RR
Sbjct: 231 WPPPSFPPSSTPPSDLDGILSRR 253
>04_01_0588 + 7657510-7657992,7658397-7658843
Length = 309
Score = 27.5 bits (58), Expect = 3.5
Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = +3
Query: 12 QTSAESWGTGRAVARIPRV---RGGGTHRSGQGAFGTMCRGGRIFAPTKPWRRW 164
++S+ W G R+ + GGG R G P PWRRW
Sbjct: 224 RSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGLGWASSWFGRPNLPWRRW 277
>03_01_0194 + 1545144-1545803,1546199-1546234
Length = 231
Score = 27.5 bits (58), Expect = 3.5
Identities = 17/60 (28%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = -3
Query: 192 VSAVGSRDGASAS-TAWSARRYVRRGTWYRMHPAQICXXXXXXXXXXGLQHDRYPKTRRW 16
+ A G D AS TA A R GTWY + Q R P + W
Sbjct: 109 LEAFGFPDSKEASGTAECAGGSSRHGTWYSFSETEAYSNSSGDTSALDFQFPRAPSEKSW 168
>03_01_0092 - 731069-731434,731569-733080
Length = 625
Score = 27.5 bits (58), Expect = 3.5
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 124 PRHMVPNAPCPDLWVPPPRTRGIRATARPVP 32
P H++P P P L P P+++ R P
Sbjct: 267 PHHIMPMTPQPQLQPPQPQSKEANTVVRAAP 297
Score = 26.6 bits (56), Expect = 6.1
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 163 QRLHGLVGAKIRPPRHMVPNAPCPDLWVPPPRTRGIRA 50
+ LHG A RPP V AP P PP G+ A
Sbjct: 44 EALHGAAAATARPP--PVSLAPAPVAVAPPATPAGLSA 79
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 79 PPPRTRGIRATARPVPQDSA 20
PPPRTR + PVP SA
Sbjct: 166 PPPRTRQVNPAPPPVPSPSA 185
>12_02_1174 - 26696869-26698191
Length = 440
Score = 27.1 bits (57), Expect = 4.6
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -2
Query: 148 LVGAKIRPPRHMVPNAPCPDLWVPPPRTRG-IRATARPVPQ 29
+V K +PP + P +P P PPRT G A P PQ
Sbjct: 205 VVQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQ 245
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 27.1 bits (57), Expect = 4.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +3
Query: 33 GTGRAVARIPRVRGGGTHRSGQGAFGTMCRGGRIFAPTKPW 155
G G A + RV GGG+ G+GA + G + W
Sbjct: 84 GAGGRGAGVRRVEGGGSGAVGEGARAAVLGGAATIGARRLW 124
>11_05_0039 + 18531669-18531993,18534352-18534411,18534417-18534661
Length = 209
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 180 GSRDGASASTAWSARRYVRRG 118
G +DG +A+T W RR RG
Sbjct: 148 GGQDGGAATTMWGGRRAKERG 168
>02_04_0518 + 23601355-23602498,23603481-23603779
Length = 480
Score = 27.1 bits (57), Expect = 4.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 177 SRDGASASTAWSARRYVRRGTWY 109
S GAS ST +A+R + GTW+
Sbjct: 363 SHSGASISTPRTAQRLAKSGTWH 385
>05_01_0442 -
3500849-3500866,3500950-3501027,3501260-3501352,
3501419-3501536,3502815-3502945,3503027-3503299,
3504825-3504882,3505065-3505388,3507404-3507852,
3509514-3509554,3510263-3510412,3510519-3510906
Length = 706
Score = 26.6 bits (56), Expect = 6.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 158 PPRLGRREDTSAAAHGTE 105
PPRLGR ++ S+AA G +
Sbjct: 271 PPRLGRMQEVSSAAGGVD 288
>02_03_0313 -
17590109-17590148,17590254-17590382,17590479-17590612,
17590779-17590841,17590920-17591070,17593372-17593424,
17593483-17593629,17593839-17594163,17594240-17594409,
17595252-17595453,17596065-17596273,17597051-17597260,
17597360-17597489,17599664-17600402,17600411-17600531
Length = 940
Score = 26.6 bits (56), Expect = 6.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 106 SVPCAAADVSSRRPSRGGAGTVA*TYGRDVLPWPPP 213
S+ C A V SRR +R G G A R+ PP
Sbjct: 176 SITCGANGVGSRRATRAGKGGAAAAAQREQHACQPP 211
>02_03_0293 -
17372071-17372217,17372301-17372471,17373334-17373435,
17373803-17374216,17374369-17374512,17374634-17375647
Length = 663
Score = 26.6 bits (56), Expect = 6.1
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 103 HSVPCAAADVSSRRPSRGGAGTVA*TYGRDVLPWPPPWQ 219
HSVP A D RGG G VA R + P P++
Sbjct: 107 HSVPLALVDAHLAPQGRGGGGVVA-AVSRVLAAHPGPFR 144
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 26.6 bits (56), Expect = 6.1
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Frame = -2
Query: 127 PPRHMVPNAPCPDLWVPPPR--TRG-IRATARPVP 32
PP VP AP P PPP T G RA + PVP
Sbjct: 146 PPPPTVPAAPTPRPSPPPPAAGTNGTARAPSPPVP 180
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 26.6 bits (56), Expect = 6.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 176 HATVPAPPRLGRREDTSAAA 117
H VP PP+LGRR + AA
Sbjct: 23 HPPVPPPPKLGRRAALAIAA 42
>04_04_1190 + 31593727-31593847,31593965-31593996
Length = 50
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -2
Query: 124 PRHMVPNAPCPDLWVPPPRTRGIRATARPVP 32
P +VP P++ VPPP RG A P+P
Sbjct: 3 PSGLVPVTGDPEMTVPPPYVRG---NAWPIP 30
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 26.2 bits (55), Expect = 8.1
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -1
Query: 227 PGRCHGGGHGSTSLP*VHATVPAPPRLGRREDTSAAAHG 111
PG G G G+ P H PAPP + A G
Sbjct: 310 PGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSG 348
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 26.2 bits (55), Expect = 8.1
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 18 SAESWGTGRAVARIPRVRGGGTHRSGQGAFG 110
S W G A A VRGGG RSG G G
Sbjct: 80 SQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,542,617
Number of Sequences: 37544
Number of extensions: 239191
Number of successful extensions: 1273
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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