Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_E18
(368 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 167 5e-42
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 167 5e-42
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 167 5e-42
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 167 5e-42
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 167 5e-42
AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p pro... 30 1.1
AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative mic... 30 1.1
AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA... 30 1.1
L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein. 29 1.4
AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA... 29 1.4
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 29 1.9
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 29 1.9
AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p pro... 28 4.4
AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4 ... 28 4.4
AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear prot... 28 4.4
AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB ... 28 4.4
BT025138-1|ABE73309.1| 175|Drosophila melanogaster IP06825p pro... 27 5.8
AE014296-854|AAF47906.1| 172|Drosophila melanogaster CG15023-PA... 27 5.8
X97197-1|CAA65831.1| 366|Drosophila melanogaster spliceosomal p... 27 7.7
BT023489-1|AAY84889.1| 347|Drosophila melanogaster RE50839p pro... 27 7.7
AE014298-857|AAF46136.1| 347|Drosophila melanogaster CG3780-PA ... 27 7.7
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 167 bits (405), Expect = 5e-42
Identities = 75/120 (62%), Positives = 88/120 (73%)
Frame = +3
Query: 9 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGTMCRGGRIFAPTKPWRRWHXXXXXXX 188
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG MCRGGR+FAPTK +RRWH
Sbjct: 63 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQ 122
Query: 189 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSD 368
Q++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR+K W+D
Sbjct: 123 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 182
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 167 bits (405), Expect = 5e-42
Identities = 75/120 (62%), Positives = 88/120 (73%)
Frame = +3
Query: 9 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGTMCRGGRIFAPTKPWRRWHXXXXXXX 188
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG MCRGGR+FAPTK +RRWH
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRRVNVNQ 60
Query: 189 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSD 368
Q++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR+K W+D
Sbjct: 61 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 120
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 167 bits (405), Expect = 5e-42
Identities = 75/120 (62%), Positives = 88/120 (73%)
Frame = +3
Query: 9 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGTMCRGGRIFAPTKPWRRWHXXXXXXX 188
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG MCRGGR+FAPTK +RRWH
Sbjct: 63 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQ 122
Query: 189 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSD 368
Q++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR+K W+D
Sbjct: 123 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 182
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 167 bits (405), Expect = 5e-42
Identities = 75/120 (62%), Positives = 88/120 (73%)
Frame = +3
Query: 9 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGTMCRGGRIFAPTKPWRRWHXXXXXXX 188
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG MCRGGR+FAPTK +RRWH
Sbjct: 63 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQ 122
Query: 189 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSD 368
Q++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR+K W+D
Sbjct: 123 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 182
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 167 bits (405), Expect = 5e-42
Identities = 75/120 (62%), Positives = 88/120 (73%)
Frame = +3
Query: 9 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGTMCRGGRIFAPTKPWRRWHXXXXXXX 188
HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG MCRGGR+FAPTK +RRWH
Sbjct: 63 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVNVNQ 122
Query: 189 XXXXXXXXXXXXXXXXXXQARGHIVEKIPELPLVVSDKVQEINKTKQAVIFLRRIKAWSD 368
Q++GH+++ + E PLVVSD+VQ++ KTKQAVIFLRR+K W+D
Sbjct: 123 RRYALVSAIAASGVPALVQSKGHVIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWAD 182
>AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p
protein.
Length = 572
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 100 PCPDLWVPPPRTRGIRATARPVPQDSAL 17
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative
microtubule severingprotein katanin p60 subunit protein.
Length = 571
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 100 PCPDLWVPPPRTRGIRATARPVPQDSAL 17
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA
protein.
Length = 572
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 100 PCPDLWVPPPRTRGIRATARPVPQDSAL 17
P PD+W PPP+ + +P P A+
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAV 160
>L08845-1|AAB08527.1| 2412|Drosophila melanogaster disabled protein.
Length = 2412
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 133 SSRRPSRGGAGTVA*TYGRDVLPWPPPWQRPGYRPS 240
SS PSRG G + DV P P Q+PG PS
Sbjct: 1408 SSAAPSRGAPGLHTPSQFNDVSTSPIPLQKPGMGPS 1443
>AE014296-2787|AAF49424.2| 2224|Drosophila melanogaster CG9695-PA
protein.
Length = 2224
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 133 SSRRPSRGGAGTVA*TYGRDVLPWPPPWQRPGYRPS 240
SS PSRG G + DV P P Q+PG PS
Sbjct: 1348 SSAAPSRGAPGLHTPSQFNDVSTSPIPLQKPGMGPS 1383
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 130 RPPRHMVPNAPCPDLWVPPPRTRGIRATARPVPQDSA 20
RPP P+AP P PP+T R +P P A
Sbjct: 128 RPPPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPA 164
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 130 RPPRHMVPNAPCPDLWVPPPRTRGIRATARPVPQ 29
RPP P+AP P P P+ + + P PQ
Sbjct: 153 RPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQ 186
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 130 RPPRHMVPNAPCPDLWVPPPRTRGIRATARPVPQDSA 20
RPP P+AP P PP+T R +P P A
Sbjct: 128 RPPPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPA 164
Score = 27.9 bits (59), Expect = 4.4
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -2
Query: 130 RPPRHMVPNAPCPDLWVPPPRTRGIRATARPVPQ 29
RPP P+AP P P P+ + + P PQ
Sbjct: 153 RPPPQPTPSAPAPSYGPPQPQPPAPQPPSPPSPQ 186
>AY122259-1|AAM52771.1| 2176|Drosophila melanogaster SD09011p protein.
Length = 2176
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 15 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGTMCRGG 128
T ES GT + V ++ R GG SG GT+ GG
Sbjct: 924 THVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 961
>AL009192-2|CAA15686.1| 2342|Drosophila melanogaster EG:133E12.4
protein.
Length = 2342
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 15 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGTMCRGG 128
T ES GT + V ++ R GG SG GT+ GG
Sbjct: 1048 THVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>AF242291-1|AAF63753.1| 2362|Drosophila melanogaster nuclear protein
EAST protein.
Length = 2362
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 15 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGTMCRGG 128
T ES GT + V ++ R GG SG GT+ GG
Sbjct: 1101 THVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1138
>AE014298-308|AAF45704.2| 2301|Drosophila melanogaster CG4399-PB
protein.
Length = 2301
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 15 TSAESWGTGRAVARIPRVRGGGTHRSGQGAFGTMCRGG 128
T ES GT + V ++ R GG SG GT+ GG
Sbjct: 1048 THVESSGTLKTVIKLNRSSNGGVSGSGGLPTGTVIHGG 1085
>BT025138-1|ABE73309.1| 175|Drosophila melanogaster IP06825p
protein.
Length = 175
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -2
Query: 127 PPRHMVPNAPCPDLWVPPPRTRGIRATARPVP 32
PP +P P P PPP T T P P
Sbjct: 62 PPPTYLPPKPVPTYLPPPPPTTTTTTTTTPAP 93
>AE014296-854|AAF47906.1| 172|Drosophila melanogaster CG15023-PA
protein.
Length = 172
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -2
Query: 127 PPRHMVPNAPCPDLWVPPPRTRGIRATARPVP 32
PP +P P P PPP T T P P
Sbjct: 59 PPPTYLPPKPVPTYLPPPPPTTTTTTTTTPAP 90
>X97197-1|CAA65831.1| 366|Drosophila melanogaster spliceosomal
protein protein.
Length = 366
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 127 PPRHMVPNA-PCPDLWVPPPRTRGIRATARPVP 32
PPR M PNA P + PPPR PVP
Sbjct: 317 PPRMMQPNAWAPPGMPAPPPRPPPTNWRPPPVP 349
>BT023489-1|AAY84889.1| 347|Drosophila melanogaster RE50839p
protein.
Length = 347
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 127 PPRHMVPNA-PCPDLWVPPPRTRGIRATARPVP 32
PPR M PNA P + PPPR PVP
Sbjct: 298 PPRMMQPNAWAPPGMPAPPPRPPPTNWRPPPVP 330
>AE014298-857|AAF46136.1| 347|Drosophila melanogaster CG3780-PA
protein.
Length = 347
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 127 PPRHMVPNA-PCPDLWVPPPRTRGIRATARPVP 32
PPR M PNA P + PPPR PVP
Sbjct: 298 PPRMMQPNAWAPPGMPAPPPRPPPTNWRPPPVP 330
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,988,353
Number of Sequences: 53049
Number of extensions: 333435
Number of successful extensions: 1883
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1875
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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