Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_E16
(189 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 63 3e-13
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 63 3e-13
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 63 3e-13
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 60 2e-12
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 20 3.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 20 3.1
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 20 3.1
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 20 3.1
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 20 3.1
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 19 5.4
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 19 7.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 19 7.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 19 7.2
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 18 9.5
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 62.9 bits (146), Expect = 3e-13
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 25 AVLIVAAGTGEFEAGISKNGQTREHALLAF 114
AVLIVAAGTGEFEAGISKNGQTREHALLAF
Sbjct: 39 AVLIVAAGTGEFEAGISKNGQTREHALLAF 68
Score = 49.2 bits (112), Expect = 4e-09
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2
Query: 68 VSQRTDKRVNTLCSLFTLGVTQLIVRVNKMDSTEPPYSES 187
+S+ R + L + FTLGV QLIV VNKMDSTEPPYSE+
Sbjct: 54 ISKNGQTREHALLA-FTLGVKQLIVGVNKMDSTEPPYSET 92
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 62.9 bits (146), Expect = 3e-13
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 25 AVLIVAAGTGEFEAGISKNGQTREHALLAF 114
AVLIVAAGTGEFEAGISKNGQTREHALLAF
Sbjct: 55 AVLIVAAGTGEFEAGISKNGQTREHALLAF 84
Score = 49.2 bits (112), Expect = 4e-09
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2
Query: 68 VSQRTDKRVNTLCSLFTLGVTQLIVRVNKMDSTEPPYSES 187
+S+ R + L + FTLGV QLIV VNKMDSTEPPYSE+
Sbjct: 70 ISKNGQTREHALLA-FTLGVKQLIVGVNKMDSTEPPYSET 108
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 62.9 bits (146), Expect = 3e-13
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +1
Query: 25 AVLIVAAGTGEFEAGISKNGQTREHALLAF 114
AVLIVAAGTGEFEAGISKNGQTREHALLAF
Sbjct: 112 AVLIVAAGTGEFEAGISKNGQTREHALLAF 141
Score = 49.2 bits (112), Expect = 4e-09
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2
Query: 68 VSQRTDKRVNTLCSLFTLGVTQLIVRVNKMDSTEPPYSES 187
+S+ R + L + FTLGV QLIV VNKMDSTEPPYSE+
Sbjct: 127 ISKNGQTREHALLA-FTLGVKQLIVGVNKMDSTEPPYSET 165
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-12
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1
Query: 25 AVLIVAAGTGEFEAGISKNGQTREHALLAF 114
AVLIVAAG GEFEAGISKNGQTREHALLAF
Sbjct: 112 AVLIVAAGIGEFEAGISKNGQTREHALLAF 141
Score = 46.0 bits (104), Expect = 4e-08
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +2
Query: 68 VSQRTDKRVNTLCSLFTLGVTQLIVRVNKMDSTEPPYSES 187
+S+ R + L + FTLGV QLIV VNKMD T+PPYSE+
Sbjct: 127 ISKNGQTREHALLA-FTLGVKQLIVGVNKMDMTDPPYSEA 165
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 144 RTISCVTPSVKSEQS 100
RT+ C+ P KSE +
Sbjct: 624 RTLPCLLPRPKSENN 638
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 144 RTISCVTPSVKSEQS 100
RT+ C+ P KSE +
Sbjct: 592 RTLPCLLPRPKSENN 606
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 19.8 bits (39), Expect = 3.1
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -2
Query: 188 ETHCMVAQWSPFCLLV 141
E+HCM ++ F L +
Sbjct: 76 ESHCMTITFASFLLFI 91
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 57 FTSTSGDNKH 28
FTS+SGDN +
Sbjct: 48 FTSSSGDNTY 57
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 19.8 bits (39), Expect = 3.1
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 57 FTSTSGDNKH 28
FTS+SGDN +
Sbjct: 50 FTSSSGDNTY 59
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 19.0 bits (37), Expect = 5.4
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = +2
Query: 14 SARGPCLLSPLVLVNSKPVSQRTDK 88
S+ PC+ +VN+ P + + K
Sbjct: 231 SSINPCIFDNATIVNNGPEAAKMAK 255
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 18.6 bits (36), Expect = 7.2
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -2
Query: 179 CMVAQWSP 156
C+V WSP
Sbjct: 196 CLVGTWSP 203
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 18.6 bits (36), Expect = 7.2
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -2
Query: 179 CMVAQWSP 156
C+V WSP
Sbjct: 196 CLVGTWSP 203
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 18.6 bits (36), Expect = 7.2
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = -2
Query: 179 CMVAQWSP 156
C+V WSP
Sbjct: 196 CLVGTWSP 203
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = +3
Query: 24 GRAYCRRW 47
G+ YC RW
Sbjct: 8 GQHYCLRW 15
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,570
Number of Sequences: 438
Number of extensions: 911
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used: 2558940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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