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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_E12
         (497 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein ...    74   7e-14
AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or cys...    74   7e-14
U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein ...    72   3e-13
AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or cys...    72   3e-13
U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    71   5e-13
U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein ...    71   5e-13
AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or cys...    71   5e-13
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    71   5e-13
AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    60   1e-09
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    60   1e-09
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    56   1e-08
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    56   1e-08
AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or cys...    49   2e-06
AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin prote...    49   2e-06
U97008-18|AAB52317.2|  115|Caenorhabditis elegans Serpin protein...    41   6e-04
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U64833-7|AAB04819.1|  254|Caenorhabditis elegans Hypothetical pr...    27   5.7  
AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cycl...    27   10.0 

>U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein 7,
           isoform c protein.
          Length = 365

 Score = 73.7 bits (173), Expect = 7e-14
 Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
 Frame = +1

Query: 10  RHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFY-YTESSNFDAKILRMPYRSNKYAMYI 186
           +++F  + T    F+ S  S + ++F++       Y E+  F  ++L +PY+ N +A+ I
Sbjct: 169 QNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTI 226

Query: 187 IVPNSLTGLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQA 360
            +P +  GL   L +L    ++  ++N+    V+V++PK+  E    L   L+ LG+++A
Sbjct: 227 FLPKTRFGLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKA 286

Query: 361 FEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQ 495
           F+  A    +A G      L +S V     IEV+E G++A AAT+
Sbjct: 287 FDNDADLGNMADG------LYVSKVTHKALIEVDEDGTVAVAATR 325


>AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 365

 Score = 73.7 bits (173), Expect = 7e-14
 Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
 Frame = +1

Query: 10  RHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFY-YTESSNFDAKILRMPYRSNKYAMYI 186
           +++F  + T    F+ S  S + ++F++       Y E+  F  ++L +PY+ N +A+ I
Sbjct: 169 QNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTI 226

Query: 187 IVPNSLTGLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQA 360
            +P +  GL   L +L    ++  ++N+    V+V++PK+  E    L   L+ LG+++A
Sbjct: 227 FLPKTRFGLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKA 286

Query: 361 FEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAATQ 495
           F+  A    +A G      L +S V     IEV+E G++A AAT+
Sbjct: 287 FDNDADLGNMADG------LYVSKVTHKALIEVDEDGTVAVAATR 325


>U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform b protein.
          Length = 366

 Score = 71.7 bits (168), Expect = 3e-13
 Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
 Frame = +1

Query: 10  RHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFY-YTESSNFDAKILRMPYRSNKYAMYI 186
           +++F  + T    F+ S  S + ++F++       Y E+  F  ++L +PY+ N +A+ I
Sbjct: 169 QNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTI 226

Query: 187 IVPNSLTGLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQA 360
            +P +  GL   L +L    ++  ++N+    V+V++PK+  E    L   L+ LG+++A
Sbjct: 227 FLPKTRFGLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKA 286

Query: 361 FEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAAT 492
           F+  A    +A G      L +S V     IEV+E G+ A AAT
Sbjct: 287 FDNDADLGNMADG------LYVSKVTHKALIEVDEEGTTAAAAT 324


>AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 71.7 bits (168), Expect = 3e-13
 Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
 Frame = +1

Query: 10  RHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFY-YTESSNFDAKILRMPYRSNKYAMYI 186
           +++F  + T    F+ S  S + ++F++       Y E+  F  ++L +PY+ N +A+ I
Sbjct: 169 QNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTI 226

Query: 187 IVPNSLTGLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQA 360
            +P +  GL   L +L    ++  ++N+    V+V++PK+  E    L   L+ LG+++A
Sbjct: 227 FLPKTRFGLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKA 286

Query: 361 FEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAAT 492
           F+  A    +A G      L +S V     IEV+E G+ A AAT
Sbjct: 287 FDNDADLGNMADG------LYVSKVTHKALIEVDEEGTTAAAAT 324


>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 70.9 bits (166), Expect = 5e-13
 Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 3/167 (1%)
 Frame = +1

Query: 1   ARGRHQFPPNMTKPGPFYVSPKSPKSVEFMNVID-HFYYTESSNFDAKILRMPYRSNKYA 177
           A  + +F    T    F+ S  S +  EF++  + +  Y+E+  F  ++L +PY+   +A
Sbjct: 175 ANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENGQF--QVLSLPYKDTSFA 232

Query: 178 MYIIVPNSLTGLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGV 351
           + I +P +  GL   L +L  + ++  M+N    LV++ +PK+  E    LN  L  +G+
Sbjct: 233 LSIFLPKTRFGLSEALQNLDSVTIQQLMSNTSNTLVNIAMPKWKIETALGLNRALMAVGI 292

Query: 352 RQAFEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAAT 492
            +AF  +A     A G      + +S       IEV+E G++A AAT
Sbjct: 293 EKAFTDSADLSNFADG------IYISQAAHKALIEVDEDGTVAAAAT 333


>U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform a protein.
          Length = 366

 Score = 70.9 bits (166), Expect = 5e-13
 Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
 Frame = +1

Query: 10  RHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFY-YTESSNFDAKILRMPYRSNKYAMYI 186
           +++F  + T    F+ S  S + ++F++       Y E+  F  ++L +PY+ N +A+ I
Sbjct: 169 QNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTI 226

Query: 187 IVPNSLTGLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQA 360
            +P +  GL   L +L    ++  ++N+    V+V++PK+  E    L   L+ LG+++A
Sbjct: 227 FLPKTRFGLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKA 286

Query: 361 FEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAAT 492
           F+  A    +A G      L +S V     IEV+E G+ A AAT
Sbjct: 287 FDNDADLGNMADG------LYVSKVTHKALIEVDEEGTKAAAAT 324


>AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 70.9 bits (166), Expect = 5e-13
 Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 3/164 (1%)
 Frame = +1

Query: 10  RHQFPPNMTKPGPFYVSPKSPKSVEFMNVIDHFY-YTESSNFDAKILRMPYRSNKYAMYI 186
           +++F  + T    F+ S  S + ++F++       Y E+  F  ++L +PY+ N +A+ I
Sbjct: 169 QNKFKKDSTFKSEFFSSADSKREIDFLHASSVSRDYAENDQF--QVLSLPYKDNTFALTI 226

Query: 187 IVPNSLTGLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQA 360
            +P +  GL   L +L    ++  ++N+    V+V++PK+  E    L   L+ LG+++A
Sbjct: 227 FLPKTRFGLTESLKTLDSATIQHLLSNVSSTSVNVQIPKWKIETKLGLEEALQSLGIKKA 286

Query: 361 FEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAAT 492
           F+  A    +A G      L +S V     IEV+E G+ A AAT
Sbjct: 287 FDNDADLGNMADG------LYVSKVTHKALIEVDEEGTKAAAAT 324


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 70.9 bits (166), Expect = 5e-13
 Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 3/167 (1%)
 Frame = +1

Query: 1   ARGRHQFPPNMTKPGPFYVSPKSPKSVEFMNVID-HFYYTESSNFDAKILRMPYRSNKYA 177
           A  + +F    T    F+ S  S +  EF++  + +  Y+E+  F  ++L +PY+   +A
Sbjct: 175 ANWQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENGQF--QVLSLPYKDTSFA 232

Query: 178 MYIIVPNSLTGLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGV 351
           + I +P +  GL   L +L  + ++  M+N    LV++ +PK+  E    LN  L  +G+
Sbjct: 233 LSIFLPKTRFGLSEALQNLDSVTIQQLMSNTSNTLVNIAMPKWKIETALGLNRALMAVGI 292

Query: 352 RQAFEGTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAAT 492
            +AF  +A     A G      + +S       IEV+E G++A AAT
Sbjct: 293 EKAFTDSADLSNFADG------IYISQAAHKALIEVDEDGTVAAAAT 333


>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
 Frame = +1

Query: 16  QFPPNMTKPGPFYVSPKSPKSVEFMNVID-HFYYTESSNFDAKILRMPYRSNKYAMYIIV 192
           +F    T    F+ S    + + F+  +D H  YTE   F  ++L + Y   K+ + I +
Sbjct: 166 KFAKESTTGREFFTSEAESRQIPFLTDVDEHRDYTEDVLF--QVLSLKYADPKFTLAIFL 223

Query: 193 PNSLTGLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFE 366
           P    GL   L  ++   ++  +N+L+   V V++PKF  E    L   L  +G+++ F 
Sbjct: 224 PKQRFGLVDALEKINGEYIQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFA 283

Query: 367 GTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAAT 492
             A   G+A      + + +S  +    IEV+E G+ A AA+
Sbjct: 284 EGADLSGIA------DKVFISSGIHKAIIEVDEDGTTAAAAS 319


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 59.7 bits (138), Expect = 1e-09
 Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
 Frame = +1

Query: 16  QFPPNMTKPGPFYVSPKSPKSVEFMNVID-HFYYTESSNFDAKILRMPYRSNKYAMYIIV 192
           +F    T    F+ S    + + F+  +D H  YTE   F  ++L + Y   K+ + I +
Sbjct: 166 KFAKESTTGREFFTSEAESRQIPFLTELDEHRDYTEDVLF--QVLSLKYADPKFTLAIFL 223

Query: 193 PNSLTGLPRVLNSLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFE 366
           P    GL   L  ++   ++  +N+L+   V V++PKF  E    L   L  +G+++ F 
Sbjct: 224 PKQRFGLVDALEKINGEYIQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIFA 283

Query: 367 GTASFPGLARGQLVREALRLSHVLQTCGIEVNEVGSIAYAAT 492
             A   G+A      + + +S  +    IEV+E G+ A AA+
Sbjct: 284 EGADLSGIA------DKVFISSGIHKAIIEVDEDGTTAAAAS 319


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 56.0 bits (129), Expect = 1e-08
 Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
 Frame = +1

Query: 73  KSVEFMN-VIDHFYYTESSNFDAKILRMPYRSNKYAMYIIVPNSLTGLPRVLNSLSDLRV 249
           K ++FM   ++   ++    FD  +L + Y   +Y   + +P     L   L  L++ R 
Sbjct: 187 KKIKFMKEFMNDRSFSSDDVFD--VLHVAYSDQRYQFSVFLPKLRNSLKEALKKLNEKRF 244

Query: 250 E--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALR 423
              +   +   ++ +LPKFT E    L   L+ LG+   F  +A   GLA      E L+
Sbjct: 245 NDLLKTKKRTFMNTQLPKFTIEKDLNLKSHLQTLGITDIFSDSADLSGLA------ENLK 298

Query: 424 LSHVLQTCGIEVNEVGSIAYAAT 492
           +S  +    IEVNE G+ A A T
Sbjct: 299 ISEGVHKAIIEVNEEGTTAAAVT 321


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 56.0 bits (129), Expect = 1e-08
 Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
 Frame = +1

Query: 73  KSVEFMN-VIDHFYYTESSNFDAKILRMPYRSNKYAMYIIVPNSLTGLPRVLNSLSDLRV 249
           K ++FM   ++   ++    FD  +L + Y   +Y   + +P     L   L  L++ R 
Sbjct: 187 KKIKFMKEFMNDRSFSSDDVFD--VLHVAYSDQRYQFSVFLPKLRNSLKEALKKLNEKRF 244

Query: 250 E--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALR 423
              +   +   ++ +LPKFT E    L   L+ LG+   F  +A   GLA      E L+
Sbjct: 245 NDLLKTKKRTFMNTQLPKFTIEKDLNLKSHLQTLGITDIFSDSADLSGLA------ENLK 298

Query: 424 LSHVLQTCGIEVNEVGSIAYAAT 492
           +S  +    IEVNE G+ A A T
Sbjct: 299 ISEGVHKAIIEVNEEGTTAAAVT 321


>AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
 Frame = +1

Query: 49  FYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIVPNSLTGLPRVLN 228
           F +S    + V  +     ++Y +   +  +++ +P++       I +P     L   L 
Sbjct: 185 FSISATENRLVPMLRETRDYFYNKDDEW--QVIGIPFKDKSAWFAIFLPTRRFALAENLK 242

Query: 229 SLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQ 402
           SL+  +    +NN+ +  + +  PKF  +Y   L   L + G+ + F   A   G+  G 
Sbjct: 243 SLNAAKFHNLINNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGIGPG- 301

Query: 403 LVREALRLSHVLQTCGIEVNEVGSIAYAATQ 495
                L+L+       IEV++VG+ A AAT+
Sbjct: 302 -----LQLASATHQALIEVDQVGTRAAAATE 327


>AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin protein
           1 protein.
          Length = 366

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 35/151 (23%), Positives = 67/151 (44%), Gaps = 2/151 (1%)
 Frame = +1

Query: 49  FYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIVPNSLTGLPRVLN 228
           F +S    + V  +     ++Y +   +  +++ +P++       I +P     L   L 
Sbjct: 185 FSISATENRLVPMLRETRDYFYNKDDEW--QVIGIPFKDKSAWFAIFLPTRRFALAENLK 242

Query: 229 SLSDLRVE--MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQ 402
           SL+  +    +NN+ +  + +  PKF  +Y   L   L + G+ + F   A   G+  G 
Sbjct: 243 SLNAAKFHNLINNVYQEYIFLTFPKFKMDYKINLKTALAKFGLAELFTEQADLSGIGPG- 301

Query: 403 LVREALRLSHVLQTCGIEVNEVGSIAYAATQ 495
                L+L+       IEV++VG+ A AAT+
Sbjct: 302 -----LQLASATHQALIEVDQVGTRAAAATE 327


>U97008-18|AAB52317.2|  115|Caenorhabditis elegans Serpin protein 5
           protein.
          Length = 115

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 26/80 (32%), Positives = 40/80 (50%)
 Frame = +1

Query: 253 MNNLRERLVDVRLPKFTFEYTSRLNGVLRELGVRQAFEGTASFPGLARGQLVREALRLSH 432
           M+N    LV++ +PK+  E    LN  L  +G+ +AF  +A     A G      + +S 
Sbjct: 1   MSNTSNTLVNIAMPKWKIETALGLNRGLMAVGIEKAFTDSADLSNFADG------IYISQ 54

Query: 433 VLQTCGIEVNEVGSIAYAAT 492
                 IEV+E G++A AAT
Sbjct: 55  AAHKALIEVDEDGTVAAAAT 74


>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
            F35G12.8 protein.
          Length = 1549

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 17/68 (25%), Positives = 33/68 (48%)
 Frame = +1

Query: 19   FPPNMTKPGPFYVSPKSPKSVEFMNVIDHFYYTESSNFDAKILRMPYRSNKYAMYIIVPN 198
            F  +M +P PFYV  +   ++++ NV     Y      +A+ + +  R+N + +     N
Sbjct: 1292 FALHMFRPTPFYVMDEIDAALDYRNVSIIAQYVRQKTENAQFIIISLRNNMFEL----AN 1347

Query: 199  SLTGLPRV 222
             L G+ +V
Sbjct: 1348 RLVGIYKV 1355


>U64833-7|AAB04819.1|  254|Caenorhabditis elegans Hypothetical
           protein B0507.9 protein.
          Length = 254

 Score = 27.5 bits (58), Expect = 5.7
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +1

Query: 166 NKYAMYIIVPNSLTGLPRVLNSLSDLRVEMNNLRERLVDVRLPKF 300
           + Y  ++ +   L  +   L+ +S+ R EMN L E  +++ +P+F
Sbjct: 201 DNYEKFVDMKKRLFAMVNCLHLISEKRGEMNRLIEEKMNLSMPQF 245


>AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cyclase
           protein 4 protein.
          Length = 954

 Score = 26.6 bits (56), Expect = 10.0
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 3   TRASPVPTEYDKTWTILRIAEITKVRGVHERYRSLL 110
           TR S + + YD  W +  + E  +++  HE+ RS+L
Sbjct: 691 TRRSELISRYDFIWKLQALDEQLQMKRKHEQNRSVL 726


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,774,946
Number of Sequences: 27780
Number of extensions: 203784
Number of successful extensions: 560
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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