Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_E10
(479 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 35 0.039
03_02_0712 - 10600147-10600196,10600257-10600378,10600993-106014... 32 0.21
01_05_0108 + 18183250-18183336,18183451-18183962,18184074-181842... 32 0.28
05_06_0116 - 25719030-25719458,25720138-25720301,25720390-257206... 31 0.37
07_03_0603 - 19890664-19890823,19891104-19891329,19891498-198916... 31 0.64
02_04_0532 + 23711530-23711755,23712984-23713093,23713204-237152... 30 1.1
02_05_0540 + 29852109-29852195,29852304-29852477,29852585-298528... 29 2.0
09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468 28 3.4
02_04_0414 - 22685981-22686178,22686374-22686465,22686580-226866... 28 3.4
01_03_0175 + 13450869-13451013,13451293-13451372,13451417-134522... 28 4.5
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 27 6.0
10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997... 27 7.9
10_08_0838 - 20927020-20927207,20927288-20927491,20927654-209282... 27 7.9
09_02_0569 - 10752756-10753164,10753229-10753644,10754149-107553... 27 7.9
07_01_0511 + 3806475-3806876,3807914-3808039,3808120-3808193,380... 27 7.9
02_01_0139 - 1008675-1008752,1008828-1008905,1009176-1009227,100... 27 7.9
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 34.7 bits (76), Expect = 0.039
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 13/97 (13%)
Frame = +2
Query: 224 ESLEWIR----VITGEPENISGDMDNFYEVLKDGTLLCKLVNTIQSNMVKKV-------- 367
E+ W+R V+ G+ + F L++G +LC +N +Q V KV
Sbjct: 58 EAANWLRRVVGVVCGKDLAEEPSEEEFRLGLRNGIVLCNALNKVQPGSVPKVVEAPSDSA 117
Query: 368 -NVSKMAFKCMENINAFLEAARQLGVPAQETFQTVDL 475
+ A++ EN+ FL + LG+P TF+ DL
Sbjct: 118 DGAALCAYQYFENVRNFLMGLQDLGLP---TFEASDL 151
>03_02_0712 -
10600147-10600196,10600257-10600378,10600993-10601489,
10601663-10601851,10601936-10602099,10602193-10602446,
10602535-10602691,10602830-10602995,10603121-10603227,
10603305-10603478,10603594-10603689,10603781-10603862,
10603948-10604058,10604253-10604309,10604638-10604709,
10604799-10605041,10605195-10605341,10605381-10605616,
10605745-10605865
Length = 1014
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +2
Query: 329 LVNTIQSNMVKKVNVSKMAFKCMENINAFLEAARQLGVPAQE 454
+VNT ++++ + AF+ EN+ FL AA+++G+P E
Sbjct: 121 VVNTAADSVLQPDGAALSAFQYFENVRNFLVAAQEIGLPCFE 162
>01_05_0108 +
18183250-18183336,18183451-18183962,18184074-18184245,
18184984-18185022,18185117-18185185,18185281-18185397,
18185842-18186056,18187085-18187240,18187328-18187527,
18187927-18188084,18188321-18188417,18188738-18188829,
18189018-18189191
Length = 695
Score = 31.9 bits (69), Expect = 0.28
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 284 DNFYEVLKDGTLLCKLVNTIQSNMV--KKVNVSKM--AFKCMENINAFLEAARQLG 439
D+ + + KDG LLCKL+N + + +N K+ ++ EN L +A+ +G
Sbjct: 187 DHLFHLTKDGVLLCKLINLAVPGTIDERAINTKKLLNLWEKNENHTLCLNSAKAIG 242
>05_06_0116 -
25719030-25719458,25720138-25720301,25720390-25720643,
25720727-25720782,25721032-25721169,25721315-25721421,
25721502-25721681,25721757-25721852,25721926-25722007,
25722084-25722425,25722666-25722695,25722788-25722880,
25722963-25723040,25723122-25723222,25723833-25724058,
25724647-25724760,25724855-25725009,25725515-25725554
Length = 894
Score = 31.5 bits (68), Expect = 0.37
Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 224 ESLEWIRVITGEP-ENISGDMDNFYEVLKDGTLLCKLVNTIQSNMVKKV-NVSKMAFKCM 397
E +EW+ + E + D E+L DGT+LC +VN + ++++ + +
Sbjct: 19 EVIEWLNALLPEYCLPLDSSDDELRELLSDGTVLCHIVNALIPGVLEESWGAYASSDQHA 78
Query: 398 ENINAFLEAARQLGVP 445
++ FL +G+P
Sbjct: 79 GHVKKFLAVVADMGLP 94
>07_03_0603 -
19890664-19890823,19891104-19891329,19891498-19891636,
19891849-19891942,19892291-19892311,19892506-19892941,
19893133-19893280,19893369-19893476,19893543-19893659,
19893960-19894016,19894488-19894553,19895140-19895328,
19895410-19895523,19895684-19895766,19895857-19896322,
19896832-19897476
Length = 1022
Score = 30.7 bits (66), Expect = 0.64
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 287 NFYEVLKDGTLLCKLVNTIQSN---MVKKVNVSKMAFKCMENINAFLEAARQLGVPAQE 454
N +E L+DG +LC+++ + S+ ++K + S K + N ++ +Q G P +
Sbjct: 410 NLFEDLQDGIILCRIIQLLTSDASIILKVIAPSDTYKKRLHNCTMAIQYIKQAGFPLSD 468
>02_04_0532 +
23711530-23711755,23712984-23713093,23713204-23715298,
23716092-23716153,23716236-23716277,23716614-23716673,
23716873-23717010,23717333-23717374,23717452-23717574
Length = 965
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 168 LPQKRRERSTVNTAKNLPRSRWNGSELSP 254
L R E+S + K+L + WNG ELSP
Sbjct: 892 LDSMRMEKSYYDKDKDLNNTHWNGKELSP 920
>02_05_0540 +
29852109-29852195,29852304-29852477,29852585-29852841,
29852954-29853125,29853513-29853551,29853647-29853715,
29853795-29853911,29854190-29854401,29854578-29854736,
29854810-29855009,29855100-29855266,29855346-29855442,
29855560-29855651,29855861-29856139
Length = 706
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = +2
Query: 284 DNFYEVLKDGTLLCKLVN-----TIQSNMVKKVNVSKMAFKCMENINAFLEAARQLG 439
+ +++++DG LLCKL+N TI + K V ++ EN L +A+ +G
Sbjct: 160 NQLFDLVRDGVLLCKLINLAVPGTIDERAINKKRVLN-PWERNENHTLCLNSAKAIG 215
>09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468
Length = 1078
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 442 HAELPRCLEECVNVFHAFERHLGYVHFLHHVRLNGVHQLAQ 320
H + R LE A +++G + FL H+ L G H LA+
Sbjct: 599 HLKHLRYLELGYTNISALPQNIGKMKFLEHIGLRGCHSLAE 639
>02_04_0414 -
22685981-22686178,22686374-22686465,22686580-22686676,
22686801-22686916,22687314-22687513,22687588-22687740,
22687960-22688171,22688403-22688519,22688613-22688687,
22688815-22688853,22689518-22689689,22689809-22690056,
22690151-22690324,22690418-22690504
Length = 659
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = +2
Query: 284 DNFYEVLKDGTLLCKLVNTIQSNMV--KKVNVSK--MAFKCMENINAFLEAARQLG 439
++ + +++DG LLCKL+N + + +N K ++ EN L +A+ +G
Sbjct: 157 NDIFNLVRDGVLLCKLINVAVPGTIDERAINTKKDPNPWERNENHTLCLNSAKAIG 212
>01_03_0175 +
13450869-13451013,13451293-13451372,13451417-13452240,
13452287-13452638
Length = 466
Score = 27.9 bits (59), Expect = 4.5
Identities = 28/101 (27%), Positives = 39/101 (38%)
Frame = -3
Query: 336 FTSLHNNVPSLSTS*KLSISPEMFSGSPVITRIHSNDSWASSSLYLLLIFLCASAANPDL 157
F+SLH + S + ++SP S S R W+SS+ LL L AS P L
Sbjct: 177 FSSLHRHGAVAVLSSRTAVSPLSSSSSSPAHRHPRRPHWSSSAAQGLLPLLRASP--PHL 234
Query: 156 VARLLAILXXXXXXXXXXXXKSQNTVGT**SSHCVQNVNRR 34
+A L + VG SS N++ R
Sbjct: 235 QVATVATLGRWSSYLYIASNVAVQAVGPATSSSSSSNMSHR 275
>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 183 RERSTVNTAKNLPRSRWNGSELSPANPKTFP 275
+ER + N NLP + G E ++PK++P
Sbjct: 3929 KERKSENENTNLPFKQIRGQECDNSDPKSYP 3959
>10_08_0911 - 21499196-21499236,21499368-21499488,21499665-21499789,
21500187-21500418,21500488-21500668,21501342-21501438,
21501641-21501779,21502024-21502351,21502890-21503137,
21503270-21503543,21504200-21504291,21504451-21504521,
21505091-21505181,21506526-21507380,21507482-21507594,
21508007-21508074,21508655-21508835,21509084-21509186,
21509273-21509379,21510046-21511584,21511661-21511771,
21511856-21511908,21511988-21512063,21512147-21512366,
21512477-21512901,21513193-21513372,21513503-21515474
Length = 2680
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/94 (20%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = +2
Query: 122 LVLNKMANNRATKSGFAAEAQRK--INSKYSEELAQ---ESLEWIRVITGEPENISGDMD 286
L+++K+ + ++ + + + R + +++ +A +S W+ ++T P + DM+
Sbjct: 2010 LIVSKVPGEKGPRTNYRSASSRAGFVRPRFAVAIAAGMADSFVWLEMLTARPVPENDDMN 2069
Query: 287 NFYEVLKDGTLLCKLVNTIQSNMVKKVNVSKMAF 388
+L +LL +NT MV + K+ F
Sbjct: 2070 EALWLLTKSSLLTISLNT-SGRMVGGFDKLKVEF 2102
>10_08_0838 -
20927020-20927207,20927288-20927491,20927654-20928297,
20928549-20928788,20928884-20928978,20929087-20929434,
20929824-20930042,20930422-20930487,20931191-20931362,
20931456-20931703,20931933-20932073,20932238-20932330,
20932421-20932471,20933571-20933693,20933793-20934035,
20934131-20934211,20935245-20935340,20935535-20936320,
20936443-20937012,20937322-20937427,20938102-20938206,
20938311-20938432,20939321-20939413,20940081-20940104
Length = 1685
Score = 27.1 bits (57), Expect = 7.9
Identities = 12/62 (19%), Positives = 31/62 (50%)
Frame = +2
Query: 122 LVLNKMANNRATKSGFAAEAQRKINSKYSEELAQESLEWIRVITGEPENISGDMDNFYEV 301
+ +N+M + T++ + E + + K++ + Q L+W++ E N D++ +
Sbjct: 157 MYINEMELRKETEAKLSQEKEESESLKHATMVLQNDLDWLKYQLNEKANRLQDLNQQKHL 216
Query: 302 LK 307
L+
Sbjct: 217 LE 218
>09_02_0569 -
10752756-10753164,10753229-10753644,10754149-10755349,
10756770-10756991,10757615-10757767,10757883-10758034,
10758142-10758222,10758353-10758598,10759394-10759516
Length = 1000
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 215 LAQESLEWIRVITGEPENISGDMDNFYEVLKDGTLL 322
L ++S++WI V + N D+D V DGTLL
Sbjct: 64 LQRKSIDWISVQRNDMSNPIHDVDLVISVGGDGTLL 99
>07_01_0511 + 3806475-3806876,3807914-3808039,3808120-3808193,
3808278-3808347,3808431-3808486,3808578-3808649,
3808678-3808811,3808967-3809030,3809111-3809240,
3809326-3809541,3809629-3809750,3810527-3810701,
3810788-3810878,3811040-3811197,3811330-3811518,
3813257-3813340,3813362-3813536,3815300-3815955,
3816226-3816648,3816752-3816790
Length = 1151
Score = 27.1 bits (57), Expect = 7.9
Identities = 22/84 (26%), Positives = 38/84 (45%)
Frame = -3
Query: 471 STVWNVS*AGTPSCRAASRNALMFSMHLNAILDTFTFFTMLD*MVFTSLHNNVPSLSTS* 292
+T+W G P+ + +FS H+ +L + F++L V S++ S TS
Sbjct: 1042 ATIWGFGSVGLPAGMFGEKFPKIFSRHMGHVL--YAAFSVL---VIYSIYLLALSTPTS- 1095
Query: 291 KLSISPEMFSGSPVITRIHSNDSW 220
L+ P SP+ +H N+ W
Sbjct: 1096 PLAPPP---PSSPLAPAVHDNELW 1116
>02_01_0139 -
1008675-1008752,1008828-1008905,1009176-1009227,
1009369-1009437,1009594-1009652,1009757-1009828,
1009945-1010038,1010311-1010356,1010510-1010609,
1010847-1011200,1011362-1011460,1011548-1011595,
1011679-1011816
Length = 428
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 332 VNTIQSNMVKKVNVSKMAFKCMENINAFLEAARQLGVP 445
++T +N KK+N S ++ +E+ A EAA++L +P
Sbjct: 79 ISTGVANAGKKLNCSPQVYESLEHHLAVAEAAQRLRLP 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,510,889
Number of Sequences: 37544
Number of extensions: 272661
Number of successful extensions: 766
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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