Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_E10
         (479 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.7  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   2.2  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   9.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.1  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 236 WIRVITGEPENISGDMDNFYEVLKD 310
           WIR+  G+  +IS  +D  YE++++
Sbjct: 61  WIRLTYGQTNHISLTLDLEYELVEN 85


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 236 WIRVITGEPENISGDMDNFYEVLKD 310
           WIR+  G+  +IS  +D  YE++++
Sbjct: 99  WIRLTYGQTNHISLTLDLEYELVEN 123


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +3

Query: 369 TYPRWRSNAWKTLTHSS--RQRGNS 437
           T PRWR+    TLT+ S    RG S
Sbjct: 82  TVPRWRNGIPATLTYISLDTNRGGS 106


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 216 LPRSRWNGSELSPANPKT 269
           +P S W+G  +   +PKT
Sbjct: 191 VPISGWHGDNMLEPSPKT 208


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 302 VLHRSCPYHRKCFRV 258
           +L + CP    CFR+
Sbjct: 261 ILKKLCPQEEACFRL 275


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 302 VLHRSCPYHRKCFRV 258
           +L + CP    CFR+
Sbjct: 176 ILKKLCPQEEACFRL 190


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -1

Query: 302 VLHRSCPYHRKCFRV 258
           +L + CP    CFR+
Sbjct: 495 ILKKLCPQEEACFRL 509


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,471
Number of Sequences: 438
Number of extensions: 2967
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)