Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_E08
         (323 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...    89   4e-20
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   1.2  
U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase...    23   2.2  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    22   6.6  

>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score = 89.0 bits (211), Expect = 4e-20
 Identities = 39/56 (69%), Positives = 43/56 (76%)
 Frame = +1

Query: 55  MGHANIWYHTHVDTGRVPRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 222
           MG AN+WY      G+  R  RACSN HG+IRKYGLNICRQCFREYA DIGF+KLD
Sbjct: 1   MGFANLWYSHPRKYGQGSRFWRACSNNHGMIRKYGLNICRQCFREYAKDIGFRKLD 56


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 106 PRSCRACSNRHGLIRKYGLNICRQCFREY 192
           PR+C      HG++ + GL +  Q  REY
Sbjct: 145 PRTCDRGEELHGMVEQLGLIVINQ-GREY 172


>U89803-1|AAD03794.1|  250|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 250

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 206 PISCAYSRKHCLQIFK 159
           P++CA   K+C + FK
Sbjct: 82  PVNCALDPKYCFKTFK 97


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -1

Query: 323  FLRFVVISRVHLF 285
            FLR V I RVHLF
Sbjct: 974  FLRQVPIRRVHLF 986


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 359,199
Number of Sequences: 2352
Number of extensions: 7727
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22045617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)