Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_E08
(323 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14973-1|AAA85661.1| 56|Homo sapiens ribosomal protein S29 pro... 86 2e-17
L31610-1|AAB27426.1| 56|Homo sapiens protein ( Homo sapiens (c... 86 2e-17
BC035313-1|AAH35313.1| 56|Homo sapiens ribosomal protein S29 p... 86 2e-17
BC032813-1|AAH32813.1| 56|Homo sapiens ribosomal protein S29 p... 86 2e-17
AB061847-1|BAB79485.1| 56|Homo sapiens ribosomal protein S29 p... 86 2e-17
AB007165-1|BAA25827.1| 26|Homo sapiens ribosomal protein S29 p... 54 1e-07
Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. 25 0.86
BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB dom... 25 0.86
AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB dom... 25 0.86
AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB dom... 25 0.86
X78933-1|CAA55533.1| 488|Homo sapiens zinc finger protein protein. 29 4.3
BC032863-1|AAH32863.1| 488|Homo sapiens zinc finger protein 345... 29 4.3
BC041873-1|AAH41873.1| 526|Homo sapiens ZNF642 protein protein. 28 5.6
AL603839-1|CAI16297.1| 526|Homo sapiens zinc finger protein 642... 28 5.6
AK122618-1|BAC85492.1| 505|Homo sapiens protein ( Homo sapiens ... 28 5.6
BC126480-1|AAI26481.1| 660|Homo sapiens zinc finger protein 540... 27 9.8
BC126478-1|AAI26479.1| 660|Homo sapiens zinc finger protein 540... 27 9.8
AL832315-1|CAD38611.1| 660|Homo sapiens hypothetical protein pr... 27 9.8
AL832100-1|CAD91161.1| 628|Homo sapiens hypothetical protein pr... 27 9.8
AK131388-1|BAD18539.1| 637|Homo sapiens protein ( Homo sapiens ... 27 9.8
AB074186-1|BAE45743.1| 343|Homo sapiens putative protein produc... 27 9.8
>U14973-1|AAA85661.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +1
Query: 55 MGHANIWYHTHVDTGRVPRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 222
MGH +++ G+ RSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>L31610-1|AAB27426.1| 56|Homo sapiens protein ( Homo sapiens
(clone cori-1cl5) S29 ribosomal protein mRNA, complete
cds. ).
Length = 56
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +1
Query: 55 MGHANIWYHTHVDTGRVPRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 222
MGH +++ G+ RSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>BC035313-1|AAH35313.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +1
Query: 55 MGHANIWYHTHVDTGRVPRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 222
MGH +++ G+ RSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>BC032813-1|AAH32813.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +1
Query: 55 MGHANIWYHTHVDTGRVPRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 222
MGH +++ G+ RSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>AB061847-1|BAB79485.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +1
Query: 55 MGHANIWYHTHVDTGRVPRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 222
MGH +++ G+ RSCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>AB007165-1|BAA25827.1| 26|Homo sapiens ribosomal protein S29
protein.
Length = 26
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = +1
Query: 139 GLIRKYGLNICRQCFREYAHDIGFKK 216
GLIRKYGLN+CRQCFR+YA DIGF K
Sbjct: 1 GLIRKYGLNMCRQCFRQYAKDIGFIK 26
>Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein.
Length = 803
Score = 25.4 bits (53), Expect(2) = 0.86
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 67 NIWYHTHVDTGRVPRSCRACS 129
N H + TG P SCR CS
Sbjct: 320 NFKRHIRIHTGEKPFSCRECS 340
Score = 24.2 bits (50), Expect(2) = 0.86
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 106 PRSCRACSNRHGLIRKYGLNICRQCFR 186
P +C+A H ++ YG C + +R
Sbjct: 346 PAACKAHEKTHSPLKPYGCEECGKSYR 372
>BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 25.4 bits (53), Expect(2) = 0.86
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 67 NIWYHTHVDTGRVPRSCRACS 129
N H + TG P SCR CS
Sbjct: 320 NFKRHIRIHTGEKPFSCRECS 340
Score = 24.2 bits (50), Expect(2) = 0.86
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 106 PRSCRACSNRHGLIRKYGLNICRQCFR 186
P +C+A H ++ YG C + +R
Sbjct: 346 PAACKAHEKTHSPLKPYGCEECGKSYR 372
>AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 25.4 bits (53), Expect(2) = 0.86
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 67 NIWYHTHVDTGRVPRSCRACS 129
N H + TG P SCR CS
Sbjct: 320 NFKRHIRIHTGEKPFSCRECS 340
Score = 24.2 bits (50), Expect(2) = 0.86
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 106 PRSCRACSNRHGLIRKYGLNICRQCFR 186
P +C+A H ++ YG C + +R
Sbjct: 346 PAACKAHEKTHSPLKPYGCEECGKSYR 372
>AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 variant protein.
Length = 803
Score = 25.4 bits (53), Expect(2) = 0.86
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 67 NIWYHTHVDTGRVPRSCRACS 129
N H + TG P SCR CS
Sbjct: 320 NFKRHIRIHTGEKPFSCRECS 340
Score = 24.2 bits (50), Expect(2) = 0.86
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +1
Query: 106 PRSCRACSNRHGLIRKYGLNICRQCFR 186
P +C+A H ++ YG C + +R
Sbjct: 346 PAACKAHEKTHSPLKPYGCEECGKSYR 372
>X78933-1|CAA55533.1| 488|Homo sapiens zinc finger protein protein.
Length = 488
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 64 ANIWYHTHVDTGRVPRSCRACSNRHG 141
AN+ YH + TG P C+ C G
Sbjct: 103 ANLAYHQRIHTGEKPFECKECGKAFG 128
>BC032863-1|AAH32863.1| 488|Homo sapiens zinc finger protein 345
protein.
Length = 488
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 64 ANIWYHTHVDTGRVPRSCRACSNRHG 141
AN+ YH + TG P C+ C G
Sbjct: 103 ANLAYHQRIHTGEKPFECKECGKAFG 128
>BC041873-1|AAH41873.1| 526|Homo sapiens ZNF642 protein protein.
Length = 526
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 10/61 (16%)
Frame = +1
Query: 64 ANIWYHTHVDTGRVPRSCRAC----------SNRHGLIRKYGLNICRQCFREYAHDIGFK 213
A + +H + TG P C+ C SN + C +C + Y HD FK
Sbjct: 424 AYLTHHQRIHTGERPYKCKECGKAFRQRIHLSNHKTVHTGVKAYECNRCGKAYRHDSSFK 483
Query: 214 K 216
K
Sbjct: 484 K 484
>AL603839-1|CAI16297.1| 526|Homo sapiens zinc finger protein 642
protein.
Length = 526
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 10/61 (16%)
Frame = +1
Query: 64 ANIWYHTHVDTGRVPRSCRAC----------SNRHGLIRKYGLNICRQCFREYAHDIGFK 213
A + +H + TG P C+ C SN + C +C + Y HD FK
Sbjct: 424 AYLTHHQRIHTGERPYKCKECGKAFRQRIHLSNHKTVHTGVKAYECNRCGKAYRHDSSFK 483
Query: 214 K 216
K
Sbjct: 484 K 484
>AK122618-1|BAC85492.1| 505|Homo sapiens protein ( Homo sapiens
cDNA FLJ16030 fis, clone NT2NE2006531, weakly similar
to ZINC FINGER PROTEIN 184. ).
Length = 505
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 10/61 (16%)
Frame = +1
Query: 64 ANIWYHTHVDTGRVPRSCRAC----------SNRHGLIRKYGLNICRQCFREYAHDIGFK 213
A + +H + TG P C+ C SN + C +C + Y HD FK
Sbjct: 424 AYLTHHQRIHTGERPYKCKECGKAFRQRIHLSNHKTVHTGVKAYECNRCGKAYRHDSSFK 483
Query: 214 K 216
K
Sbjct: 484 K 484
>BC126480-1|AAI26481.1| 660|Homo sapiens zinc finger protein 540
protein.
Length = 660
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 13/53 (24%)
Frame = +1
Query: 79 HTHVDTGRVPRSCRACSN---------RHGLI----RKYGLNICRQCFREYAH 198
H + TG P C+ C H I + Y +CR+ FR+Y+H
Sbjct: 597 HQRIHTGEKPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKAFRQYSH 649
>BC126478-1|AAI26479.1| 660|Homo sapiens zinc finger protein 540
protein.
Length = 660
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 13/53 (24%)
Frame = +1
Query: 79 HTHVDTGRVPRSCRACSN---------RHGLI----RKYGLNICRQCFREYAH 198
H + TG P C+ C H I + Y +CR+ FR+Y+H
Sbjct: 597 HQRIHTGEKPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKAFRQYSH 649
>AL832315-1|CAD38611.1| 660|Homo sapiens hypothetical protein
protein.
Length = 660
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 13/53 (24%)
Frame = +1
Query: 79 HTHVDTGRVPRSCRACSN---------RHGLI----RKYGLNICRQCFREYAH 198
H + TG P C+ C H I + Y +CR+ FR+Y+H
Sbjct: 597 HQRIHTGEKPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKAFRQYSH 649
>AL832100-1|CAD91161.1| 628|Homo sapiens hypothetical protein
protein.
Length = 628
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 13/53 (24%)
Frame = +1
Query: 79 HTHVDTGRVPRSCRACSN---------RHGLI----RKYGLNICRQCFREYAH 198
H + TG P C+ C H I + Y +CR+ FR+Y+H
Sbjct: 565 HQRIHTGEKPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKAFRQYSH 617
>AK131388-1|BAD18539.1| 637|Homo sapiens protein ( Homo sapiens
cDNA FLJ16465 fis, clone BRHIP2017553, weakly similar
to Zinc finger protein 184. ).
Length = 637
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 13/53 (24%)
Frame = +1
Query: 79 HTHVDTGRVPRSCRACSN---------RHGLI----RKYGLNICRQCFREYAH 198
H + TG P C+ C H I + Y +CR+ FR+Y+H
Sbjct: 574 HQRIHTGEKPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKAFRQYSH 626
>AB074186-1|BAE45743.1| 343|Homo sapiens putative protein product
of Nbla10512 protein.
Length = 343
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 13/53 (24%)
Frame = +1
Query: 79 HTHVDTGRVPRSCRACSN---------RHGLI----RKYGLNICRQCFREYAH 198
H + TG P C+ C H I + Y +CR+ FR+Y+H
Sbjct: 280 HQRIHTGEKPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKAFRQYSH 332
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,757,048
Number of Sequences: 237096
Number of extensions: 1007096
Number of successful extensions: 5804
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 5754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5799
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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