Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_E08
         (323 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.2  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   3.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   6.5  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    20   8.6  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   8.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   8.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 314  FVVISRVHLFGSHRNETILRL 252
            +VV  RVH+ G   +ET+L L
Sbjct: 1191 YVVDVRVHVPGESESETVLTL 1211


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 224 KLRFNKIFNVSEELFHFYENQINE 295
           KLRF  +F+ ++EL       INE
Sbjct: 189 KLRFENLFDGNKELGEQMNRFINE 212


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -2

Query: 172 CRYSSHIYE*DHVC 131
           CRY +H +   H C
Sbjct: 737 CRYEAHCFALCHCC 750


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +2

Query: 29  SRKQTNFTSWVTQISGITPT*IRAGFPVHAE 121
           S K T + +W    +G   + I   + +HA+
Sbjct: 106 SPKLTPYPNWAQNKAGACGSAITTAYRIHAD 136


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 160 LNICRQCFREYAHDIGFKKL 219
           LN+  Q    Y+H + FK L
Sbjct: 453 LNLAAQKREYYSHYVAFKSL 472


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 33   ENKLILHHGSRKYLVSHPRRYGQ 101
            ++KLI+ H S+K     P++  Q
Sbjct: 1488 DSKLIVDHSSQKTQQQQPQQQQQ 1510


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,686
Number of Sequences: 438
Number of extensions: 1771
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)