Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_E06
         (489 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   2.3  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   2.3  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   2.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.3  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 159 NISKLTTLIIYWVSLINS*FTFINSV 82
           +I     LI +WVS +N+    +NSV
Sbjct: 485 DIKMQKVLIDFWVSFVNNGVPNVNSV 510


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 79  YTNIINEKWNVIYYNTISCEQ 17
           Y N  N     +YYN I+ EQ
Sbjct: 343 YNNNYNNNCKKLYYNIINIEQ 363


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 159 NISKLTTLIIYWVSLINS*FTFINSV 82
           +I     LI +WVS +N+    +NSV
Sbjct: 485 DIKMQKVLIDFWVSFVNNGVPNVNSV 510


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -1

Query: 267 LSCFLYIYIKKVFIIKSLSHIYLR 196
           LSC L+  I  VFI      I LR
Sbjct: 208 LSCILFFLIPMVFIAVLYIRIGLR 231


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,382
Number of Sequences: 438
Number of extensions: 1938
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)