BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_E05
(589 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40800-9|AAA81494.1| 316|Caenorhabditis elegans Hypothetical pr... 109 2e-24
Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical pr... 54 6e-08
AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of... 54 6e-08
Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical pr... 31 0.61
Z69385-8|CAA93423.1| 529|Caenorhabditis elegans Hypothetical pr... 31 0.61
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto... 30 1.1
Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical pr... 29 1.9
AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin recep... 29 3.2
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z81125-4|CAB03383.3| 594|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 28 5.7
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF098995-12|AAC67485.1| 406|Caenorhabditis elegans Hypothetical... 28 5.7
Z93778-2|CAB07845.1| 159|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 9.9
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 9.9
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 9.9
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 9.9
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein. 27 9.9
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 9.9
AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical ... 27 9.9
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 9.9
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 9.9
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 9.9
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 9.9
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 9.9
AC024791-3|AAF60673.1| 468|Caenorhabditis elegans Hypothetical ... 27 9.9
>U40800-9|AAA81494.1| 316|Caenorhabditis elegans Hypothetical
protein D2096.8 protein.
Length = 316
Score = 109 bits (261), Expect = 2e-24
Identities = 59/157 (37%), Positives = 81/157 (51%)
Frame = +2
Query: 68 TAINEGNDDKNKPGEDNKSAEPRMDPNVKGIPDFWYNIFRNVSMLCEMMQEHDEPILKCL 247
T I EG + ++ E K+AE DP+ KGI DFW R ++ E ++EHD PIL L
Sbjct: 86 TPILEGLEG-DQLAELYKAAEA--DPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYL 142
Query: 248 QDIKVHMHEDPIGFTLEFHFAANDYFTNNILTKEYSMKCKPDDENPLEFEGPEIYSCKGC 427
D+ +DP GF +EFHFA N YF N +LTK Y + PD E PL+F+GP + G
Sbjct: 143 TDVTTAASKDPAGFKIEFHFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIRAVGD 202
Query: 428 DINWXXXXXXXXXXXXXXXXXXSRGSVRTVTKSVQAD 538
I W + + +TK+V+AD
Sbjct: 203 TIEWEDGKNVTKKAVKKKQKKGANAG-KFLTKTVKAD 238
>Z54236-2|CAE46661.1| 313|Caenorhabditis elegans Hypothetical
protein C27B7.1b protein.
Length = 313
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 158 IPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYFTNN 334
I +FW F N +L + E E +L L+D++V ED GF + F N+YFTN
Sbjct: 77 IDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNE 136
Query: 335 ILTKEYSMKCKPDDENPLEFEGPE 406
++TK Y ++ + E E E
Sbjct: 137 VITKSYHLQSESPSTEITEIEWKE 160
>Z54236-1|CAA90979.2| 312|Caenorhabditis elegans Hypothetical
protein C27B7.1a protein.
Length = 312
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 158 IPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYFTNN 334
I +FW F N +L + E E +L L+D++V ED GF + F N+YFTN
Sbjct: 77 IDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNE 136
Query: 335 ILTKEYSMKCKPDDENPLEFEGPE 406
++TK Y ++ + E E E
Sbjct: 137 VITKSYHLQSESPSTEITEIEWKE 160
>AF321546-1|AAG42102.1| 312|Caenorhabditis elegans suppressor of
presenilin 2 protein.
Length = 312
Score = 54.4 bits (125), Expect = 6e-08
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 158 IPDFWYNIFRNVSMLCEMMQEHDEPILKCLQDIKVHMHED-PIGFTLEFHFAANDYFTNN 334
I +FW F N +L + E E +L L+D++V ED GF + F N+YFTN
Sbjct: 77 IDNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNE 136
Query: 335 ILTKEYSMKCKPDDENPLEFEGPE 406
++TK Y ++ + E E E
Sbjct: 137 VITKSYHLQSESPSTEITEIEWKE 160
>Z70311-3|CAA94372.1| 546|Caenorhabditis elegans Hypothetical
protein T25B9.4 protein.
Length = 546
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -1
Query: 139 HPGLSR---LVVFTGFVFIIISFINGGGLDGPCK 47
HP + R + V V+I+I FINGGGLD K
Sbjct: 191 HPNIVRCRGIAVLEQPVYIVIEFINGGGLDSYLK 224
>Z69385-8|CAA93423.1| 529|Caenorhabditis elegans Hypothetical
protein ZK593.9 protein.
Length = 529
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -1
Query: 139 HPGLSR---LVVFTGFVFIIISFINGGGLDGPCK 47
HP + R + V V+I+I FINGGGLD K
Sbjct: 174 HPNIVRCRGIAVLEQPVYIVIEFINGGGLDSYLK 207
>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
substrate homologprotein 1 protein.
Length = 1003
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 344 KEYSMKCKPDDENPLEFEGPEIYSCKGC 427
K +++ P DE+P EF PE+Y C C
Sbjct: 87 KPLAVEDLPKDEDPDEFGIPEVYKCGNC 114
>Z46829-1|CAA86862.1| 375|Caenorhabditis elegans Hypothetical
protein T14B1.1 protein.
Length = 375
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 14 NPWRDETEDEDLARAVQATAINEGNDDKN----KPGEDNKSAEPRMDPNVKG-IPDFWYN 178
+P RDE +E LA+ ++ A G D+++ +P D S E + P+ + +P+
Sbjct: 6 DPGRDEEVEEPLAKKIRVVAQEAGEDEESEMEKEPNADLSSEEELVAPDAEDFVPEIDNE 65
Query: 179 IFRNVSMLCEMMQEHDE 229
+ + E M+ + E
Sbjct: 66 ATAHCYQVAEAMRRNRE 82
>AY064245-1|AAL40865.1| 1003|Caenorhabditis elegans insulin receptor
substrate-likeprotein protein.
Length = 1003
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 344 KEYSMKCKPDDENPLEFEGPEIYSCKGC 427
K +++ P DE+P EF PE++ C C
Sbjct: 87 KPLAVEDLPKDEDPDEFGIPEVFKCGNC 114
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 20 WRDETEDEDLARAVQATAINEGNDDKNKPGEDNKSAEPRMDPNVKGI 160
W ED DL + V+ NE +++ E KS R NVKG+
Sbjct: 91 WYAHGED-DLRKVVRIDRSNEEENERPATAEIQKSPTKRASTNVKGL 136
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 20 WRDETEDEDLARAVQATAINEGNDDKNKPGEDNKSAEPRMDPNVKGI 160
W ED DL + V+ NE +++ E KS R NVKG+
Sbjct: 58 WYAHGED-DLRKVVRIDRSNEEENERPATAEIQKSPTKRASTNVKGL 103
>Z81125-4|CAB03383.3| 594|Caenorhabditis elegans Hypothetical
protein T22A3.6 protein.
Length = 594
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 308 AANDYFTNNILTKEYSMKCKPDDENPLEFEGPEIY 412
+++ Y N IL EY C+ D+NPL GP Y
Sbjct: 231 SSSSYSMNRILPDEYENFCRNPDKNPL---GPWCY 262
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 23 RDETEDEDLARAVQATAINEGNDDKNKPGEDNKSAEPRMDPNVK 154
+DETED D + + E NK G + SAE + V+
Sbjct: 272 KDETEDTDATGDEEDSMFEEVKSASNKSGAEKSSAEQTSNAGVE 315
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 27.9 bits (59), Expect = 5.7
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +2
Query: 23 RDETEDEDLARAVQATAINEGNDDKNKPGEDNKSAEPRMDPNVK 154
+DETED D + + E NK G + SAE + V+
Sbjct: 272 KDETEDTDATGDEEDSMFEEVKSASNKSGAEKSSAEQTSNAGVE 315
>AF098995-12|AAC67485.1| 406|Caenorhabditis elegans Hypothetical
protein F58E1.12 protein.
Length = 406
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 230 PILKCLQDIKVHMHEDPIGFTLEFHFAANDYFTNNILTKEYSMKCK 367
PI C++ ++H + +G+TL+ H A N Y ++L ++K +
Sbjct: 173 PISYCIRLTVGNLHTEIVGYTLKLHDAIN-YLARSLLGGRKNIKIR 217
>Z93778-2|CAB07845.1| 159|Caenorhabditis elegans Hypothetical
protein C31H5.5 protein.
Length = 159
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 32 TEDEDLARAVQATAINEGNDDKNKPGEDNKSAEPRM 139
T++E+ +R V+ ++ +DK P ED+K R+
Sbjct: 55 TKEEEKSRLVECNLDSDEEEDKTPPKEDDKGQNIRL 90
>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical
protein C25G4.5 protein.
Length = 1263
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 5 EGLNPWRDETEDEDLARAVQATAINEGNDDKNKPGEDNKSAEPRMD 142
+G+N D + D A+ T ++ ND K E+N + EPR+D
Sbjct: 157 DGMNGMLDFLNNMD--DALTTTELDADNDKNWKEDEENIAGEPRID 200
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 48 LHGPSKPPPLMKEMMIKTNPV 110
+H PS+P P+ +E+ ++T+PV
Sbjct: 1556 VHVPSEPSPMEEEVKLETSPV 1576
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 48 LHGPSKPPPLMKEMMIKTNPV 110
+H PS+P P+ +E+ ++T+PV
Sbjct: 1847 VHVPSEPSPMEEEVKLETSPV 1867
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 48 LHGPSKPPPLMKEMMIKTNPV 110
+H PS+P P+ +E+ ++T+PV
Sbjct: 1862 VHVPSEPSPMEEEVKLETSPV 1882
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 48 LHGPSKPPPLMKEMMIKTNPV 110
+H PS+P P+ +E+ ++T+PV
Sbjct: 1666 VHVPSEPSPMEEEVKLETSPV 1686
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 48 LHGPSKPPPLMKEMMIKTNPV 110
+H PS+P P+ +E+ ++T+PV
Sbjct: 1556 VHVPSEPSPMEEEVKLETSPV 1576
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 48 LHGPSKPPPLMKEMMIKTNPV 110
+H PS+P P+ +E+ ++T+PV
Sbjct: 1847 VHVPSEPSPMEEEVKLETSPV 1867
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 48 LHGPSKPPPLMKEMMIKTNPV 110
+H PS+P P+ +E+ ++T+PV
Sbjct: 1862 VHVPSEPSPMEEEVKLETSPV 1882
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +3
Query: 48 LHGPSKPPPLMKEMMIKTNPV 110
+H PS+P P+ +E+ ++T+PV
Sbjct: 1666 VHVPSEPSPMEEEVKLETSPV 1686
>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
Length = 1263
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 5 EGLNPWRDETEDEDLARAVQATAINEGNDDKNKPGEDNKSAEPRMD 142
+G+N D + D A+ T ++ ND K E+N + EPR+D
Sbjct: 157 DGMNGMLDFLNNMD--DALTTTELDADNDKNWKEDEENIAGEPRID 200
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 95 KNKPGEDNKSAEPRMDPNVKGIPDF 169
+N G+D+K A+ +++PNVK P F
Sbjct: 2150 QNSAGQDSKQADLKVEPNVKA-PKF 2173
>AL132851-1|CAB60411.1| 403|Caenorhabditis elegans Hypothetical
protein Y53H1B.1 protein.
Length = 403
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 35 EDEDLARAVQATAINEGNDDKNKPGEDNKSAEPRMDPNVKGIPDFWYNIFRNVS 196
E + + V + +++GN D+ KP D +DP + +PD YN NV+
Sbjct: 189 ESDMFSMLVHSCFVDDGNGDERKPLLDEHGC--AIDPLI--LPDLTYNKDNNVA 238
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 95 KNKPGEDNKSAEPRMDPNVKGIPDF 169
+N G+D+K A+ +++PNVK P F
Sbjct: 1510 QNSAGQDSKQADLKVEPNVKA-PKF 1533
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 95 KNKPGEDNKSAEPRMDPNVKGIPDF 169
+N G+D+K A+ +++PNVK P F
Sbjct: 2150 QNSAGQDSKQADLKVEPNVKA-PKF 2173
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 95 KNKPGEDNKSAEPRMDPNVKGIPDF 169
+N G+D+K A+ +++PNVK P F
Sbjct: 2150 QNSAGQDSKQADLKVEPNVKA-PKF 2173
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 95 KNKPGEDNKSAEPRMDPNVKGIPDF 169
+N G+D+K A+ +++PNVK P F
Sbjct: 1510 QNSAGQDSKQADLKVEPNVKA-PKF 1533
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 95 KNKPGEDNKSAEPRMDPNVKGIPDF 169
+N G+D+K A+ +++PNVK P F
Sbjct: 2150 QNSAGQDSKQADLKVEPNVKA-PKF 2173
>AC024791-3|AAF60673.1| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.13 protein.
Length = 468
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 11 LNPWRDETEDEDLARAVQATAINEGNDDKNKPGEDNKSAEPRMDPNVKGIP 163
L+P+ E ED+++ R +A + ++K K ++NK E D IP
Sbjct: 301 LDPY--EWEDDEMERMAKAEKEEKEKEEKEKKEKENKENELSADSMKTAIP 349
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,532,197
Number of Sequences: 27780
Number of extensions: 287196
Number of successful extensions: 910
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -