Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_E05
         (589 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    24   1.3  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    24   1.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.9  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   6.8  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   9.0  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.0  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.0  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   9.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.0  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +2

Query: 317 DYFTNN---ILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINW 439
           D+F  N   IL +EY     P  E+ +E    E+ S +GC++ W
Sbjct: 90  DFFVKNARMILLEEYI----PRVESVVETCKKEVTSTEGCEVAW 129


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +2

Query: 317 DYFTNN---ILTKEYSMKCKPDDENPLEFEGPEIYSCKGCDINW 439
           D+F  N   IL +EY     P  E+ +E    E+ S +GC++ W
Sbjct: 64  DFFVKNARMILLEEYI----PRVESVVETCKKEVTSTEGCEVAW 103


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 513 PSPSLCRRIPSSTSSAPP 566
           P+P +     SSTSS+PP
Sbjct: 513 PNPRIASAPSSSTSSSPP 530


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 83  GNDDKNKPGEDNKSAE 130
           G ++KNK G+DN   E
Sbjct: 102 GFNNKNKDGDDNNDYE 117


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 118 VVFTGFVFIIISFINGGG 65
           V+  GF+F+I+ F++  G
Sbjct: 25  VLLVGFLFLILIFLSVAG 42


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 187 SKYIVPEVGDSLDIRIHPGLSRL 119
           S Y++ E G  +DI    GL+ L
Sbjct: 342 SGYLIDEYGKKIDIYTPEGLNML 364


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 187 SKYIVPEVGDSLDIRIHPGLSRL 119
           S Y++ E G  +DI    GL+ L
Sbjct: 342 SGYLIDEYGKKIDIYTPEGLNML 364


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 74  INEGNDDKNKPGEDNKSAEPRMDPNVKGIP 163
           IN+   DK + G D +   P ++ ++ G+P
Sbjct: 178 INQNMGDKVEIGIDLREYYPSVEWDILGVP 207


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 250 LQAFKDRLIMFLHHL 206
           LQ  +DRL   +HHL
Sbjct: 330 LQKERDRLTAMMHHL 344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,062
Number of Sequences: 438
Number of extensions: 3612
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)