Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_E04
(604 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 292 3e-80
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 292 3e-80
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 167 1e-42
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 62 8e-11
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 40 4e-04
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 30 0.23
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 30 0.30
SPBC8D2.01 |gsk31||serine/threonine protein kinase Gsk31|Schizos... 28 0.91
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 28 1.2
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 27 2.1
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 27 2.8
SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2 |Schizosacc... 26 3.7
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 26 4.9
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 26 4.9
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 26 4.9
SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces pombe... 25 6.4
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 25 6.4
SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual 25 8.5
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 292 bits (716), Expect = 3e-80
Identities = 137/195 (70%), Positives = 156/195 (80%)
Frame = +3
Query: 18 ESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKH 197
ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVVSYRE+VSE S LSKSPNKH
Sbjct: 524 ESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKH 583
Query: 198 NRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGP 377
NR+FM A+PM E L I+ G VNPRDDFK RAR ++D++ +D+T+ARKIWCFGP+ TG
Sbjct: 584 NRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGA 643
Query: 378 NILVDCSKGVQYLNEIKDSVVAGFQWAANECAMAEENLRGVRFNIYDVTLHTDAIHRGGG 557
N++VD +K V YLNEIKDSVVA F WA+ E M EENLR RFNI DV LH DAIHRGGG
Sbjct: 644 NVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGG 703
Query: 558 QIIPTTRRCLYACLL 602
QIIPT RR +YA L
Sbjct: 704 QIIPTARRVVYASTL 718
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 292 bits (716), Expect = 3e-80
Identities = 137/195 (70%), Positives = 156/195 (80%)
Frame = +3
Query: 18 ESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKH 197
ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVVSYRE+VSE S LSKSPNKH
Sbjct: 524 ESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKH 583
Query: 198 NRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGP 377
NR+FM A+PM E L I+ G VNPRDDFK RAR ++D++ +D+T+ARKIWCFGP+ TG
Sbjct: 584 NRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGA 643
Query: 378 NILVDCSKGVQYLNEIKDSVVAGFQWAANECAMAEENLRGVRFNIYDVTLHTDAIHRGGG 557
N++VD +K V YLNEIKDSVVA F WA+ E M EENLR RFNI DV LH DAIHRGGG
Sbjct: 644 NVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGG 703
Query: 558 QIIPTTRRCLYACLL 602
QIIPT RR +YA L
Sbjct: 704 QIIPTARRVVYASTL 718
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 167 bits (405), Expect = 1e-42
Identities = 81/200 (40%), Positives = 116/200 (58%), Gaps = 4/200 (2%)
Frame = +3
Query: 15 EESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNK 194
EESGEH + G GE++++ L DL ++ I I+ SDPV + ET + S C S +PNK
Sbjct: 635 EESGEHTIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVARFCETAVDTSSIKCFSDTPNK 694
Query: 195 HNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTG 374
NR+ M +P+ +G+ DI++GKVN K + + Y++DL +R IW FGP+ G
Sbjct: 695 KNRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRG 754
Query: 375 PNILVDCSKGV----QYLNEIKDSVVAGFQWAANECAMAEENLRGVRFNIYDVTLHTDAI 542
NIL D + LN +K+ + GFQW E + +E +R V F + DV L + I
Sbjct: 755 TNILRDDTLSTDVDKNVLNSVKEYIKQGFQWGTREGPLCDETIRNVNFRLMDVVLAPEQI 814
Query: 543 HRGGGQIIPTTRRCLYACLL 602
+RGGGQIIPT RR Y+ L
Sbjct: 815 YRGGGQIIPTARRVCYSSFL 834
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 61.7 bits (143), Expect = 8e-11
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +3
Query: 15 EESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSK 182
EE+GEH++ AGE+HLE CLKDL E A I I+ S P+V YRET D + +K
Sbjct: 598 EENGEHVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVPYRETTIATPDLLAKNK 653
Score = 29.1 bits (62), Expect = 0.52
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Frame = +3
Query: 174 LSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARK--- 344
+S + +K NR + ++ + + + E + K F R L ++ DL E +
Sbjct: 696 VSSNFSKKNRNVVVSESLTKSMEEVLTPEK------FYERLSKLLEEENSDLGELKNHLD 749
Query: 345 -IWCFGPEGTGPNILVDCSKGVQYL-----------NEIKDSVVAGFQWAANECAMAEEN 488
I FGP+ GPNIL D +K ++ +++ + VV FQ ++ + E
Sbjct: 750 SIIAFGPKRVGPNILFDKTKKMRDFRRQSDETKLIPSDLSEYVVTAFQLITHQGPLCAEP 809
Query: 489 LRGVRFNIYDVTLHTDA 539
++G+ +I + D+
Sbjct: 810 VQGICVSIDQFDISDDS 826
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 39.5 bits (88), Expect = 4e-04
Identities = 17/51 (33%), Positives = 35/51 (68%)
Frame = +3
Query: 6 RINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEE 158
+++ ES E I++G GELHLE+ ++ + ++ + + P V++RET+S++
Sbjct: 507 QLDNESKETIISGMGELHLEVYVERMRREYK-VDCETGKPRVAFRETLSKK 556
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 30.3 bits (65), Expect = 0.23
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +3
Query: 12 NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPN 191
+EE+ + A E C++DL++ + K+SD Y T++ ++KS
Sbjct: 198 DEETLHELFPNASEF---TCVRDLKKLEKKVK-KRSDLGNKYESTLNS-----LINKSVK 248
Query: 192 KHNRLFMKAQPMPEGL 239
KHN+L K +P+P L
Sbjct: 249 KHNKLVKKHKPLPSTL 264
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 29.9 bits (64), Expect = 0.30
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +3
Query: 72 LKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLFMKAQPMPE 233
+K LEE+ + +K SD V + ++ + P +++FM PMP+
Sbjct: 287 VKYLEENFGALKVKLSDATVKEIREACDNAEVIGARYPPGAGSKIFMDTPPMPK 340
>SPBC8D2.01 |gsk31||serine/threonine protein kinase
Gsk31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 381
Score = 28.3 bits (60), Expect = 0.91
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 467 FIGGPLEPGDDRVLDLVQVLHTL 399
FIG PL PGD V LV+++ L
Sbjct: 220 FIGRPLFPGDSSVEQLVEIIRVL 242
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 18 ESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKH 197
E+G+ ++ G G +HL++ + L + V YRET+ + S + NK
Sbjct: 481 ENGQLLIQGMGIMHLQVSYERLVSEFGA-RASLGKVQVGYRETLIDVSFNSVTLSTENKE 539
Query: 198 N 200
N
Sbjct: 540 N 540
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 237 LPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARK 344
LPE ID+GK++ DD KT + D + K
Sbjct: 194 LPEKIDEGKLSDVDDGKTYICWRGDSQYVSINRLEK 229
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +3
Query: 327 LTEARKIWCFGPEGTGPNILVD--CSKGVQYLNE 422
L E + GP G+G ++LVD S+ Q +NE
Sbjct: 572 LGEGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPBC4.04c |mcm2|cdc19, nda1|MCM complex subunit Mcm2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 830
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 138 RETVSEESDQMCLSKSPNKHNRLFMKAQP 224
R T EE + L+KSP+ HNR+ P
Sbjct: 466 RLTDDEEREIRALAKSPDIHNRIIASMAP 494
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 25.8 bits (54), Expect = 4.9
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = -1
Query: 175 KHIWSDSSLTVSRYDTTGSDFLIGMQAWSSSRSLRQISRCNSPAPATMCSPDSSLIL 5
K + S S L+ S T+ S + SSS SP P T +P SS IL
Sbjct: 78 KSLSSSSILSNSTISTSSSTPITASVPTSSSILSNSTIPTTSPVPTTSSTPTSSSIL 134
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 25.8 bits (54), Expect = 4.9
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -1
Query: 175 KHIWSDSSLTVSRYDTTGSDFLIGM 101
+HIW + L + R + G D ++G+
Sbjct: 57 EHIWQNEELNLQRVEYQGKDCILGI 81
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 25.8 bits (54), Expect = 4.9
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 3/130 (2%)
Frame = +3
Query: 6 RINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKS 185
+I E+ ++ + L E ++ + E I + + + +++ D +
Sbjct: 418 QIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRFALG 477
Query: 186 PNKHNRLFMKAQPMPEGLPEDI---DDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCF 356
+ + L +P EDI ++ K R+ + Y + +T ++ + F
Sbjct: 478 SSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFF 537
Query: 357 GPEGTGPNIL 386
GP GTG +L
Sbjct: 538 GPPGTGKTLL 547
>SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 422
Score = 25.4 bits (53), Expect = 6.4
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -3
Query: 461 GGPLEPGDDRVLDLVQVLHTLRAVDEDVRSGALGAEAPDLTR 336
G PL G D V L +LH L DE+ S + A + R
Sbjct: 225 GTPLFKGKDFVHQLNLILHQLGTPDEETLSHISSSRAQEYVR 266
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 63 EICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNK 194
E+C +LE+D I +S +S + +++ DQ+ S + +K
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISK 107
>SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 241 GRPSGMGWAFMKRRLCLL 188
G P G+ WA M R+C L
Sbjct: 228 GFPGGVAWAMMVARICQL 245
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,257,328
Number of Sequences: 5004
Number of extensions: 44701
Number of successful extensions: 171
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 264253462
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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