Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_E04
(604 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 281 3e-76
04_01_0103 + 1082077-1082167,1083037-1085477 281 4e-76
02_04_0017 + 18937774-18937864,18938505-18940945 281 4e-76
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 251 4e-67
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 190 6e-49
03_05_0511 + 25056018-25059107 59 3e-09
02_04_0148 - 20198407-20201424 56 2e-08
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 46 2e-05
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 38 0.008
07_01_0468 + 3537669-3537890,3539003-3539130,3539398-3539621,353... 30 1.6
04_03_0531 + 16817676-16818299 30 1.6
01_02_0022 + 10290033-10290407,10290497-10290848,10290923-102910... 29 2.8
04_03_0424 + 15786147-15786213,15786751-15787037 28 5.0
11_06_0282 - 21884702-21885085 28 6.5
10_08_0621 + 19328357-19329545,19329967-19329986 28 6.5
07_03_1219 + 24960043-24960133,24960304-24960336,24962258-249624... 28 6.5
05_01_0518 + 4421314-4421346,4421427-4421767,4421960-4422619,442... 28 6.5
01_05_0175 - 18936752-18937621,18938855-18941641 28 6.5
02_02_0340 + 9135846-9138377 27 8.7
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 281 bits (689), Expect = 3e-76
Identities = 134/199 (67%), Positives = 161/199 (80%), Gaps = 3/199 (1%)
Frame = +3
Query: 15 EESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESDQMCLSKSPN 191
EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPN
Sbjct: 519 EESGEHIIAGAGELHLEICLKDLQEDFMGGAEITVSPPVVSFRETVLEKSCRTVMSKSPN 578
Query: 192 KHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGT 371
KHNRL+M+A+PM EGLPE ID+G++ PRDD K R++ LS+++ +D A+KIWCFGPE T
Sbjct: 579 KHNRLYMEARPMEEGLPEAIDEGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETT 638
Query: 372 GPNILVDCSKGVQYLNEIKDSVVAGFQWAANECAMAEENL--RGVRFNIYDVTLHTDAIH 545
GPNI+VD KGVQYLNEIKDSVVAGFQWA+ E A+AEEN+ RG+ F + DV LH+DAIH
Sbjct: 639 GPNIVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGRGICFEVCDVILHSDAIH 698
Query: 546 RGGGQIIPTTRRCLYACLL 602
RGGGQIIPT RR +YA L
Sbjct: 699 RGGGQIIPTARRVIYAAQL 717
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 281 bits (688), Expect = 4e-76
Identities = 131/197 (66%), Positives = 159/197 (80%), Gaps = 1/197 (0%)
Frame = +3
Query: 15 EESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESDQMCLSKSPN 191
EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPN
Sbjct: 523 EESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPN 582
Query: 192 KHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGT 371
KHNRL+M+A+P+ EGL E IDDG++ PRDD K R++ LS+++ +D A+KIWCFGPE T
Sbjct: 583 KHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETT 642
Query: 372 GPNILVDCSKGVQYLNEIKDSVVAGFQWAANECAMAEENLRGVRFNIYDVTLHTDAIHRG 551
GPN++VD KGVQYLNEIKDSVVAGFQWA+ E A+AEEN+RG+ F + DV LH DAIHRG
Sbjct: 643 GPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRG 702
Query: 552 GGQIIPTTRRCLYACLL 602
GGQ+IPT RR +YA L
Sbjct: 703 GGQVIPTARRVIYASQL 719
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 281 bits (688), Expect = 4e-76
Identities = 131/197 (66%), Positives = 159/197 (80%), Gaps = 1/197 (0%)
Frame = +3
Query: 15 EESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESDQMCLSKSPN 191
EESGEHI+AGAGELHLEICLKDL+ED I S PVVS+RETV E+S + +SKSPN
Sbjct: 523 EESGEHIIAGAGELHLEICLKDLQEDFMGGAEIIVSPPVVSFRETVLEKSCRTVMSKSPN 582
Query: 192 KHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGT 371
KHNRL+M+A+P+ EGL E IDDG++ PRDD K R++ LS+++ +D A+KIWCFGPE T
Sbjct: 583 KHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKVRSKILSEEFGWDKDLAKKIWCFGPETT 642
Query: 372 GPNILVDCSKGVQYLNEIKDSVVAGFQWAANECAMAEENLRGVRFNIYDVTLHTDAIHRG 551
GPN++VD KGVQYLNEIKDSVVAGFQWA+ E A+AEEN+RG+ F + DV LH DAIHRG
Sbjct: 643 GPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHADAIHRG 702
Query: 552 GGQIIPTTRRCLYACLL 602
GGQ+IPT RR +YA L
Sbjct: 703 GGQVIPTARRVIYASQL 719
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 251 bits (614), Expect = 4e-67
Identities = 119/205 (58%), Positives = 155/205 (75%), Gaps = 9/205 (4%)
Frame = +3
Query: 15 EESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESDQMCLSKSPN 191
EESGEH++AG G+LHLEIC+KDL+ED I P+++YRETV++ S + +SKSPN
Sbjct: 525 EESGEHVIAGVGQLHLEICIKDLQEDFMGGAEIIVGPPIITYRETVTKNSCRTVMSKSPN 584
Query: 192 KHNRLFMKAQPMP-EGLPED-------IDDGKVNPRDDFKTRARYLSDKYEYDLTEARKI 347
KHNRL+M+A+P+ E L +D IDD ++ P+DD K R + LS+++ +D A+KI
Sbjct: 585 KHNRLYMEARPLDKEDLQQDEPSLCKAIDDERIGPKDDIKERGKILSEEFGWDKDLAKKI 644
Query: 348 WCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAANECAMAEENLRGVRFNIYDVTL 527
W FGPE GPN+LVD KGVQYL+EIKDSVVAGFQWA+ E A+AEEN+RGV F + DVTL
Sbjct: 645 WAFGPETKGPNLLVDMCKGVQYLSEIKDSVVAGFQWASKEGALAEENMRGVCFELCDVTL 704
Query: 528 HTDAIHRGGGQIIPTTRRCLYACLL 602
H+D+IHRGGGQ+IPT RR +YA L
Sbjct: 705 HSDSIHRGGGQLIPTARRAMYAAQL 729
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 190 bits (464), Expect = 6e-49
Identities = 88/200 (44%), Positives = 131/200 (65%), Gaps = 4/200 (2%)
Frame = +3
Query: 15 EESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNK 194
EESGEH + G GEL+L+ +KDL E ++ + +K +DPVV++ ETV + S C +++PNK
Sbjct: 646 EESGEHTILGTGELYLDSIMKDLRELYSEVEVKVADPVVTFCETVVDTSSMKCFAETPNK 705
Query: 195 HNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTG 374
N++ M A+P+ +GL EDI++G V+ K + +Y++D+ AR IW FGPE G
Sbjct: 706 RNKITMVAEPLEKGLAEDIENGLVSLDSRQKEITDFFRQRYQWDVLAARSIWAFGPEKQG 765
Query: 375 PNILVDCSKGVQ----YLNEIKDSVVAGFQWAANECAMAEENLRGVRFNIYDVTLHTDAI 542
PNIL+D + V+ LN +KDS+V GFQW A E + +E +R V+F I + + + +
Sbjct: 766 PNILLDDTLSVEVDKNLLNAVKDSIVQGFQWGAREGPLCDEPIRNVKFKILNANIAPEPL 825
Query: 543 HRGGGQIIPTTRRCLYACLL 602
HRGGGQIIPT RR +Y+ L
Sbjct: 826 HRGGGQIIPTARRVVYSAFL 845
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/47 (53%), Positives = 35/47 (74%)
Frame = +3
Query: 18 ESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEE 158
+ GEH++A AGE+HLE C KDLEE A + + SDP+VS++ET+ E
Sbjct: 573 QRGEHVLAAAGEIHLERCKKDLEERFAKVKLVVSDPLVSFKETIEGE 619
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 56.0 bits (129), Expect = 2e-08
Identities = 30/92 (32%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Frame = +3
Query: 18 ESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEE----------SDQ 167
E GEH++A AGE+HLE C+K+L+E A + ++ S P+VS+++T+ E S +
Sbjct: 553 ERGEHVLAAAGEIHLEHCIKNLQERFARVQLEVSKPLVSFKDTIQGEGAGIMESLKASHE 612
Query: 168 MCLSKSPNKHNRLFMKAQPMPEGLPEDIDDGK 263
+PN + +K +P + + I+D K
Sbjct: 613 FVERTTPNGRFTVRVKVFRLPNAVTKVIEDSK 644
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/85 (30%), Positives = 48/85 (56%)
Frame = +3
Query: 9 INEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSP 188
++ ESGE I++G GELHL+I ++ + ++ + K P V++RET+++ ++ L K
Sbjct: 512 LDPESGETIISGMGELHLDIYVERIRREYK-VDAKVGKPRVNFRETITQRAEFDYLHKKQ 570
Query: 189 NKHNRLFMKAQPMPEGLPEDIDDGK 263
+ + + E LP + DGK
Sbjct: 571 SGGQGQYGRVCGYIEPLPSE-SDGK 594
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/57 (31%), Positives = 34/57 (59%)
Frame = +3
Query: 12 NEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSK 182
+EE+ + ++ G GELHL+I + L+ + + P V+YRE++S+ S+ + K
Sbjct: 493 DEETNQTVIEGMGELHLDIIVDRLKREFR-VEANVGAPQVNYRESISKISEVQYVHK 548
>07_01_0468 +
3537669-3537890,3539003-3539130,3539398-3539621,
3539660-3540062,3540398-3540473
Length = 350
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = -3
Query: 398 RAVDEDVRSGALGAEAPDLTRFGQIVLVLVAEVTGAGLEVVTGVHFAV 255
RA+DED AL E DL R + LVLV E G G+ G F V
Sbjct: 160 RAIDEDELLDALDGE--DLERAHEQALVLVHEAGGIGVGHADGKVFGV 205
>04_03_0531 + 16817676-16818299
Length = 207
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -1
Query: 103 MQAWSSSRSLRQIS-RCNSPAPATMC 29
+Q WSS+ ++R S C PAPAT C
Sbjct: 177 LQQWSSTAAVRGTSIYCRPPAPATQC 202
>01_02_0022 +
10290033-10290407,10290497-10290848,10290923-10291070,
10291145-10291225,10291651-10291822,10292120-10292158,
10292384-10292543,10292676-10292779,10292979-10293278
Length = 576
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = -3
Query: 566 NDLTATSVNGVSVKGDVINVESNPSQVLLGHGAFIGGPLEPGDDRVLDLVQVLHTLRAVD 387
+D T +K D++ + N + +L G P +PGD DL+ + LRA
Sbjct: 118 SDPVLTMAVDSGLKDDLVFGDPNAPRFVLWEGKLRPVPSKPGDLPFFDLMSIPGKLRA-- 175
Query: 386 EDVRSGALGAEAP 348
GALG AP
Sbjct: 176 ---GLGALGVRAP 185
>04_03_0424 + 15786147-15786213,15786751-15787037
Length = 117
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 208 KRRLCLLGDLDKHIWSDSSLTVSRYDTT--GSDFLIGMQAWSSSRSLR 71
K +C + D IW++ S S D+T GS +I +S RSLR
Sbjct: 13 KYEICSIFDKCSSIWNEDSAVESGSDSTCRGSSSIISTSETASLRSLR 60
>11_06_0282 - 21884702-21885085
Length = 127
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 246 DIDDGKVNPRDDFKTRARYLSDKYEYDLTEARK 344
++D G V+P DDF ++ Y+ + DL RK
Sbjct: 43 EVDAGVVDPDDDFYYKSLYVLHESSKDLRHVRK 75
>10_08_0621 + 19328357-19329545,19329967-19329986
Length = 402
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +3
Query: 324 DLTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQW---AANECAMAEE 485
D+T +R+I P G G I + GV +L S+V F+W A +E AE+
Sbjct: 322 DVTGSREIRMM-PFGAGRRICAGLNVGVMHLEYFVGSMVMEFEWKEVAGDEVEFAEK 377
>07_03_1219 +
24960043-24960133,24960304-24960336,24962258-24962486,
24963183-24963309,24963530-24963869,24964806-24965095
Length = 369
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 156 ESDQMCLSKSPNKHNRLFMKAQPMPEGLPE 245
E + +CL PN+H + + A+ +P LPE
Sbjct: 42 EKENLCLYGFPNEHWEVNLPAEEVPPELPE 71
>05_01_0518 +
4421314-4421346,4421427-4421767,4421960-4422619,
4422992-4423116,4423337-4423692,4423768-4423852,
4423917-4423954
Length = 545
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 254 INILRQTFRHGLGLHEET-VVLVGRFG*AHLVRLFTDRFTI 135
+N+LR ++H GL +E VLV R G ++ +T F I
Sbjct: 487 VNLLRNRYKHFNGLPDEVKAVLVNRKGLVKIISEWTPNFWI 527
>01_05_0175 - 18936752-18937621,18938855-18941641
Length = 1218
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -3
Query: 557 TATSVNGVSVK-GDVINVESNPSQVLLGHGAFIGGP-LEPGDDRVLDLVQVLHTLRAVD 387
T S+N VK G + ++V+LG P L PGD R+L+ V V VD
Sbjct: 809 TVPSLNSYFVKHGSRFSSTDKNTEVILGTVVIAKNPCLHPGDVRILEAVDVPELHHLVD 867
>02_02_0340 + 9135846-9138377
Length = 843
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 130 TTGSDFLIGMQAWSSSRSLRQISRCNSPAPATMCS 26
TTGSD L G+Q + R+L I+ P +CS
Sbjct: 801 TTGSDVLDGLQPHYNLRALGIINHGGPTGPGWLCS 835
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,014,937
Number of Sequences: 37544
Number of extensions: 340188
Number of successful extensions: 1193
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1186
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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