Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_E03
(281 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58762-4|AAK39303.1| 109|Caenorhabditis elegans Hypothetical pr... 37 0.003
Z66495-11|CAK12849.1| 502|Caenorhabditis elegans Hypothetical p... 27 2.1
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 27 2.1
U50072-4|AAA93451.1| 250|Caenorhabditis elegans Cytochrome p450... 27 2.1
AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical ... 27 2.7
AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical ... 27 2.7
AF016443-9|AAC24273.1| 364|Caenorhabditis elegans Hypothetical ... 26 3.6
Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical pr... 26 4.8
Z81489-5|CAB04006.1| 104|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 25 8.4
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 25 8.4
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 25 8.4
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 25 8.4
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 25 8.4
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 25 8.4
U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical pr... 25 8.4
>U58762-4|AAK39303.1| 109|Caenorhabditis elegans Hypothetical
protein T27F7.3b protein.
Length = 109
Score = 36.7 bits (81), Expect = 0.003
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +1
Query: 154 MSIQNLNTFHPFADAIKS--SEDDVQDGLLHVRIQQWNGRNTST 279
MSI NLN P ADA + +ED V+ G+ H+RIQQ GR T T
Sbjct: 1 MSIANLN--RP-ADAFEQLETEDGVRQGVCHIRIQQRTGRKTIT 41
>Z66495-11|CAK12849.1| 502|Caenorhabditis elegans Hypothetical
protein C36A4.3 protein.
Length = 502
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 38 NWSPVSGNTPPRVISDSYIVEVRCIAAFH*NKEHLRSIVCP 160
N+S S TPP +I D+ + E + +H RS + P
Sbjct: 103 NFSNFSDRTPPPIIEDNKLKESLLQNTYESGWKHTRSAIAP 143
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical
protein C13F10.4 protein.
Length = 2076
Score = 27.1 bits (57), Expect = 2.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -3
Query: 177 CVQILDGHTIERRCSLFQ*NAAIQRTS 97
C++IL+G T E RC++ + A + TS
Sbjct: 228 CIKILEGSTYELRCAVAKFTAQLLATS 254
>U50072-4|AAA93451.1| 250|Caenorhabditis elegans Cytochrome p450
family protein 25A6 protein.
Length = 250
Score = 27.1 bits (57), Expect = 2.1
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 38 NWSPVSGNTPPRVISDSYIVEVRCIAAFH*NKEHLRSIVCP 160
N+S S TPP +I D+ + E + +H RS + P
Sbjct: 103 NFSNFSDRTPPPIIEDNKLKESLLQNTYESGWKHTRSAIAP 143
>AF068714-1|AAC17808.1| 254|Caenorhabditis elegans Hypothetical
protein B0348.5 protein.
Length = 254
Score = 26.6 bits (56), Expect = 2.7
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 173 THSTHSPMLSKARRTTCKMVYCTSESSSGTGVTHRP 280
T ST P KAR+ T K V SSS T T +P
Sbjct: 210 TTSTRKPR--KARKPTKKTVAAAPSSSSNTSTTAKP 243
>AC024859-3|AAK29969.2| 871|Caenorhabditis elegans Hypothetical
protein Y71H2AM.10 protein.
Length = 871
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 29 VRVNWSPVSGNTPPRVISDSYIVEVRCIAAFH*NKEHL 142
V +W PV N V+S SY V +C FH +HL
Sbjct: 94 VPFSWFPVDQNRTS-VLSVSYTVSEKCDQNFHDLPQHL 130
>AF016443-9|AAC24273.1| 364|Caenorhabditis elegans Hypothetical
protein C17E7.4 protein.
Length = 364
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 277 SMCYARSTAGFGRAVDHLARRPPSF**HRRMGGMCSDS 164
S Y F R++D L PPS+ + + +CS S
Sbjct: 262 SFAYPNPPLPFHRSMDFLNSGPPSYLYNENLSSLCSSS 299
>Z46791-7|CAA86760.2| 473|Caenorhabditis elegans Hypothetical
protein C09G5.1 protein.
Length = 473
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 164 WMDIRLNVDALCFNETLRYNALQQYNC 84
W D R+++ LC + RY L NC
Sbjct: 155 WYDCRISLTVLCMQDLARY-PLDSQNC 180
>Z81489-5|CAB04006.1| 104|Caenorhabditis elegans Hypothetical
protein C55A1.6 protein.
Length = 104
Score = 25.0 bits (52), Expect = 8.4
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +3
Query: 3 TRVRHYILVSA*IGHLSAETHRRALSVTVILLKCVVSQRFIETKSIYVQSYVHPESE 173
T ++ + A I LSA T R A V+ S +FI S VQ++V +E
Sbjct: 32 TELKDAGMTQASIDQLSAFTQRFATGYPVVQSNKEASDKFIADYSADVQNFVKSMNE 88
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 201 DSIGEWVECVQILDGHT 151
D G+WVEC ++ DG T
Sbjct: 3268 DKFGDWVECARV-DGKT 3283
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 201 DSIGEWVECVQILDGHT 151
D G+WVEC ++ DG T
Sbjct: 3797 DKFGDWVECARV-DGKT 3812
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 201 DSIGEWVECVQILDGHT 151
D G+WVEC ++ DG T
Sbjct: 3478 DKFGDWVECARV-DGKT 3493
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 201 DSIGEWVECVQILDGHT 151
D G+WVEC ++ DG T
Sbjct: 3268 DKFGDWVECARV-DGKT 3283
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 201 DSIGEWVECVQILDGHT 151
D G+WVEC ++ DG T
Sbjct: 3797 DKFGDWVECARV-DGKT 3812
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 201 DSIGEWVECVQILDGHT 151
D G+WVEC ++ DG T
Sbjct: 3478 DKFGDWVECARV-DGKT 3493
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 25.0 bits (52), Expect = 8.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 201 DSIGEWVECVQILDGHT 151
D G+WVEC ++ DG T
Sbjct: 2687 DKFGDWVECARV-DGKT 2702
>U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical
protein C14E2.2 protein.
Length = 364
Score = 25.0 bits (52), Expect = 8.4
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = -3
Query: 231 TILHVVLRAFDSIGEWVECVQILDGHTIERRCSLFQ*NAAIQRTSTI*LSLITRGGVFPL 52
TI+H VL W++ +Q + + R +LF +A+ +T +I + G+F
Sbjct: 253 TIVHKVLSTSARREFWIQSIQQISSRIKQMRTALFDVLSAL-KTPGSWDHIIRQTGMFSY 311
Query: 51 TG 46
TG
Sbjct: 312 TG 313
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,239,962
Number of Sequences: 27780
Number of extensions: 133689
Number of successful extensions: 384
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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