Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_E02
(436 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 171 7e-43
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 171 7e-43
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 171 7e-43
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 171 7e-43
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 171 7e-43
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 171 7e-43
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 171 7e-43
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 171 7e-43
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 171 7e-43
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 171 7e-43
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 150 2e-36
BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein. 32 0.98
BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein. 32 0.98
AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens ... 32 0.98
AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein pr... 32 0.98
AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein pr... 32 0.98
M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein... 31 1.7
CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein. 31 1.7
BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding prote... 31 1.7
AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein pr... 31 1.7
X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein pro... 30 4.0
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 171 bits (417), Expect = 7e-43
Identities = 82/120 (68%), Positives = 95/120 (79%)
Frame = +3
Query: 6 RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
RVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 3 RVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQ 62
Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 63 RGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 171 bits (417), Expect = 7e-43
Identities = 82/120 (68%), Positives = 95/120 (79%)
Frame = +3
Query: 6 RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
RVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 3 RVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQ 62
Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 63 RGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 171 bits (417), Expect = 7e-43
Identities = 82/120 (68%), Positives = 95/120 (79%)
Frame = +3
Query: 6 RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
RVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 3 RVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQ 62
Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 63 RGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 171 bits (417), Expect = 7e-43
Identities = 82/120 (68%), Positives = 95/120 (79%)
Frame = +3
Query: 6 RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
RVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 3 RVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQ 62
Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 63 RGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 171 bits (417), Expect = 7e-43
Identities = 82/120 (68%), Positives = 95/120 (79%)
Frame = +3
Query: 6 RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
RVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 3 RVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQ 62
Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 63 RGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 171 bits (417), Expect = 7e-43
Identities = 82/120 (68%), Positives = 95/120 (79%)
Frame = +3
Query: 6 RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
RVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 3 RVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQ 62
Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 63 RGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 171 bits (417), Expect = 7e-43
Identities = 82/120 (68%), Positives = 95/120 (79%)
Frame = +3
Query: 6 RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
RVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 3 RVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQ 62
Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 63 RGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 171 bits (417), Expect = 7e-43
Identities = 82/120 (68%), Positives = 95/120 (79%)
Frame = +3
Query: 6 RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
RVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 3 RVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQ 62
Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 63 RGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 171 bits (417), Expect = 7e-43
Identities = 82/120 (68%), Positives = 95/120 (79%)
Frame = +3
Query: 6 RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
RVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 3 RVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQ 62
Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 63 RGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 171 bits (417), Expect = 7e-43
Identities = 82/120 (68%), Positives = 95/120 (79%)
Frame = +3
Query: 6 RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
RVRT YYTRL DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R+
Sbjct: 3 RVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQ 62
Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
VRGISIKLQEEERERRDNYVPEVSAL+Q+IIEVD DTK+MLK+LDF +++ LQ+TQP
Sbjct: 63 RGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 150 bits (363), Expect = 2e-36
Identities = 69/103 (66%), Positives = 84/103 (81%)
Frame = +3
Query: 57 YYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLIHSQVRGISIKLQEEERE 236
YY L DF TNK +C+EIAIIP+K L NK AG+ THLM+++ VRGISIKLQEE RE
Sbjct: 20 YYMHLGNDFHTNKHMCKEIAIIPSKKLHNKTAGYVTHLMKQIQRGPVRGISIKLQEEVRE 79
Query: 237 RRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
RRDNYVPE+SAL+Q+IIEVD DTK+MLK+LDF ++ LQ+TQP
Sbjct: 80 RRDNYVPEISALDQEIIEVDPDTKEMLKLLDFGGLSNLQVTQP 122
>BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein.
Length = 405
Score = 31.9 bits (69), Expect = 0.98
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 219 QEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 329
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein.
Length = 312
Score = 31.9 bits (69), Expect = 0.98
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 219 QEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 329
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ43965 fis, clone TESTI4017001. ).
Length = 416
Score = 31.9 bits (69), Expect = 0.98
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 219 QEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 329
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 234 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 270
>AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein
protein.
Length = 437
Score = 31.9 bits (69), Expect = 0.98
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 219 QEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 329
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 31.9 bits (69), Expect = 0.98
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 219 QEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLD 329
+EEE E + Y P LEQ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein
isoform II protein.
Length = 591
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +3
Query: 177 RLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 314
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein.
Length = 591
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +3
Query: 177 RLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 314
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding protein
2, interferon-inducible protein.
Length = 591
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +3
Query: 177 RLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 314
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein
protein.
Length = 591
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/46 (28%), Positives = 29/46 (63%)
Frame = +3
Query: 177 RLIHSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDM 314
+L+ Q + +++KLQE+ER ++ + E L++DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>X87832-1|CAB57274.1| 1754|Homo sapiens NOV/plexin-A1 protein protein.
Length = 1754
Score = 29.9 bits (64), Expect = 4.0
Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Frame = -3
Query: 434 FVFFFCFYNISLITSATVASLCS--RLR*LQTINVTEVKHLQHILGVRIDFNDILF*SRY 261
FVF+ C + S ++ + C + R + T NV + L+ + V D IL ++
Sbjct: 634 FVFYNCSVHQSCLSCVNGSFPCHWCKYRHVCTHNVADCAFLEGRVNVSEDCPQILPSTQI 693
Query: 260 FWDI-IVTPFTLLFLKLNRDSSHLGVYETSHQMGGEPSNFVAKRLSRN--DSNFLTYPFI 90
+ + +V P TL L + S YE + G P+ A R + + +Y +
Sbjct: 694 YVPVGVVKPITLAARNLPQPQSGQRGYECLFHIPGSPARVTALRFNSSSLQCQNSSYSYE 753
Query: 89 GIEVKSKP 66
G +V P
Sbjct: 754 GNDVSDLP 761
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,602,849
Number of Sequences: 237096
Number of extensions: 1120258
Number of successful extensions: 2648
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2648
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -