Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_E02
         (436 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...   198   4e-51
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...   198   4e-51
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...   198   4e-51
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...   198   4e-51
AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-P...    29   3.6  
AY119169-1|AAM51029.1|  918|Drosophila melanogaster RH46576p pro...    28   4.8  
AE014298-1936|AAF48298.1|  918|Drosophila melanogaster CG12176-P...    28   4.8  
DQ923614-1|ABI95804.1| 2765|Drosophila melanogaster DUNC79 protein.    27   8.3  
AE014297-2646|AAF55654.2| 2958|Drosophila melanogaster CG5237-PA...    27   8.3  

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score =  198 bits (482), Expect = 4e-51
 Identities = 100/131 (76%), Positives = 105/131 (80%)
 Frame = +3

Query: 6   RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
           RVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL 
Sbjct: 3   RVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLR 62

Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
           HSQVRGISIKLQEEERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP
Sbjct: 63  HSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQP 122

Query: 366 ATQGGYGGRRN 398
            T     GRRN
Sbjct: 123 NTNN--FGRRN 131


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score =  198 bits (482), Expect = 4e-51
 Identities = 100/131 (76%), Positives = 105/131 (80%)
 Frame = +3

Query: 6   RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
           RVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL 
Sbjct: 3   RVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLR 62

Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
           HSQVRGISIKLQEEERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP
Sbjct: 63  HSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQP 122

Query: 366 ATQGGYGGRRN 398
            T     GRRN
Sbjct: 123 NTNN--FGRRN 131


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score =  198 bits (482), Expect = 4e-51
 Identities = 100/131 (76%), Positives = 105/131 (80%)
 Frame = +3

Query: 6   RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
           RVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL 
Sbjct: 3   RVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLR 62

Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
           HSQVRGISIKLQEEERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP
Sbjct: 63  HSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQP 122

Query: 366 ATQGGYGGRRN 398
            T     GRRN
Sbjct: 123 NTNN--FGRRN 131


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score =  198 bits (482), Expect = 4e-51
 Identities = 100/131 (76%), Positives = 105/131 (80%)
 Frame = +3

Query: 6   RVRTXXXXXXXXXXXXXYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFTTHLMRRLI 185
           RVRT             YYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RL 
Sbjct: 3   RVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLR 62

Query: 186 HSQVRGISIKLQEEERERRDNYVPEVSALEQDIIEVDSDTKDMLKMLDFSNINGLQLTQP 365
           HSQVRGISIKLQEEERERRDNYVP VSALEQDIIEVD+DTK+MLK+LDF NI GLQLTQP
Sbjct: 63  HSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQP 122

Query: 366 ATQGGYGGRRN 398
            T     GRRN
Sbjct: 123 NTNN--FGRRN 131


>AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-PB,
           isoform B protein.
          Length = 1109

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -3

Query: 266 RYFWDIIVTPFTLLFLKLNRDSSHLGVYETSHQMGGE 156
           RY   ++ TP +L FL L+ D+ HL  Y +   + GE
Sbjct: 17  RYLTLLMNTPLSLSFLCLSADAQHLIAYISQRGLHGE 53


>AY119169-1|AAM51029.1|  918|Drosophila melanogaster RH46576p protein.
          Length = 918

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
 Frame = +3

Query: 120  IPTKPLRNKIAGFTTHLMRRLIHSQVRGISI----------KLQEEERERRDNYVPEVSA 269
            +P  P    IAG  T L++RLI  Q R   I          + QE E + RD  +     
Sbjct: 707  LPNDPKCFCIAGDETFLVKRLILQQPRTCDIVRMEWLLRVCQKQELELKPRD-LIAATEP 765

Query: 270  LEQDIIEV-----DSDTKDMLKMLDFSN-INGLQLTQPATQG 377
            L+QD+ E      DS TKD+  + +  + + G++LT     G
Sbjct: 766  LQQDLAECFDRHGDSYTKDIANVEELQDLLQGIELTADNVAG 807


>AE014298-1936|AAF48298.1|  918|Drosophila melanogaster CG12176-PA
            protein.
          Length = 918

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
 Frame = +3

Query: 120  IPTKPLRNKIAGFTTHLMRRLIHSQVRGISI----------KLQEEERERRDNYVPEVSA 269
            +P  P    IAG  T L++RLI  Q R   I          + QE E + RD  +     
Sbjct: 707  LPNDPKCFCIAGDETFLVKRLILQQPRTCDIVRMEWLLRVCQKQELELKPRD-LIAATEP 765

Query: 270  LEQDIIEV-----DSDTKDMLKMLDFSN-INGLQLTQPATQG 377
            L+QD+ E      DS TKD+  + +  + + G++LT     G
Sbjct: 766  LQQDLAECFDRHGDSYTKDIANVEELQDLLQGIELTADNVAG 807


>DQ923614-1|ABI95804.1| 2765|Drosophila melanogaster DUNC79 protein.
          Length = 2765

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 228  ERERRDNYVPEVSALEQDIIEVDSDTKD 311
            ER R    +P++S L+QD ++V   TKD
Sbjct: 1924 ERVRDGLNLPDISHLKQDSLDVSESTKD 1951


>AE014297-2646|AAF55654.2| 2958|Drosophila melanogaster CG5237-PA
            protein.
          Length = 2958

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 228  ERERRDNYVPEVSALEQDIIEVDSDTKD 311
            ER R    +P++S L+QD ++V   TKD
Sbjct: 2117 ERVRDGLNLPDISHLKQDSLDVSESTKD 2144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,550,098
Number of Sequences: 53049
Number of extensions: 339184
Number of successful extensions: 1027
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)