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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_D21
         (501 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851...    47   7e-06
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410...    47   1e-05
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577...    37   0.008
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876...    37   0.008
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591...    33   0.097
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833...    32   0.23 
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884...    32   0.23 
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713...    32   0.30 
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955...    30   0.91 
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948...    30   1.2  
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216...    29   2.8  
01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464     29   2.8  
01_06_0609 + 30583191-30583229,30583799-30583907,30584377-30585518     29   2.8  
05_06_0273 - 26851077-26851167,26851433-26851869,26852125-268522...    28   3.7  
03_02_0459 + 8649448-8651994                                           28   3.7  
08_02_0685 + 20039318-20040433,20040574-20040982,20042906-200429...    28   4.8  
06_01_0326 + 2372176-2373057,2373146-2373610                           27   6.4  
02_05_0497 - 29502012-29502101,29502128-29502197,29502302-295024...    27   6.4  
12_01_0088 - 698169-698614,699514-700819,703041-703148                 27   8.5  
11_01_0087 - 654461-654912,655878-657186,659080-659187                 27   8.5  
05_01_0013 - 85732-86829                                               27   8.5  
02_01_0602 + 4481869-4482111,4482315-4482472,4482603-4483467           27   8.5  
01_06_0586 + 30420745-30421350,30421933-30422172,30422770-304229...    27   8.5  

>12_02_0992 +
           25083397-25083537,25084198-25084228,25084971-25085139,
           25085228-25085291,25085408-25085474,25086543-25086586,
           25086835-25086922,25087079-25087238,25087659-25087779,
           25087859-25087942,25088043-25088162,25088689-25088901,
           25088995-25089054,25089144-25089262,25089407-25089465,
           25089585-25089919
          Length = 624

 Score = 47.2 bits (107), Expect = 7e-06
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 7   GC-NTVIQCRIVTALNKKWHPEHFTCNTCRKPIDGAKFHQHNNGVHCVPCFAQHHSPRCH 183
           GC N +   R ++ ++  WHP+ F C  C KPI   +F  H +  +   C+     P+C 
Sbjct: 259 GCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFFHPKCD 318

Query: 184 GC 189
            C
Sbjct: 319 VC 320



 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +1

Query: 331 YADKFAARCKGCLKPIVDKAVIA-LDAKWHRDCFTCMKCRNPVTDSTFSVMDNQP 492
           +A   +  C GC  PI     ++ +D+ WH  CF C  C  P+++  F++ ++QP
Sbjct: 249 FASSGSRTCAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQP 303



 Score = 39.1 bits (87), Expect = 0.002
 Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
 Frame = +1

Query: 154 FAQHHSPRCHGCGDPITD-RVIQALGVAWHANHFVXXXXXXXXXXXXFMEQAGRPYCSAC 330
           FA   S  C GC +PI   R +  +   WH   F             F     +PY  +C
Sbjct: 249 FASSGSRTCAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSC 308

Query: 331 YADKFAARCKGC 366
           Y D F  +C  C
Sbjct: 309 YKDFFHPKCDVC 320


>06_01_0579 +
           4099039-4099086,4099798-4099848,4100151-4100286,
           4100287-4100401,4100496-4100528,4101037-4101166,
           4101663-4101751,4102042-4102148,4102238-4102309,
           4102384-4102764,4104907-4105064,4105581-4105674,
           4106082-4106089,4106297-4106387,4107136-4107289,
           4108257-4108377,4108468-4108551,4108946-4109065,
           4109181-4109393,4109482-4109544,4109668-4109783,
           4110132-4110190,4111126-4111445
          Length = 920

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +1

Query: 7   GCNTVI-QCRIVTALNKKWHPEHFTCNTCRKPIDGAKFHQHNNGVHCVPCFAQHHSPRCH 183
           GC++ I   R ++ +   WHPE F C+ C +PI   +F    N  +   C+ +   P+C 
Sbjct: 560 GCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPKCD 619

Query: 184 GC 189
            C
Sbjct: 620 VC 621



 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +1

Query: 355 CKGCLKPIVDKAVIA-LDAKWHRDCFTCMKCRNPVTDSTFSVMDNQP 492
           C GC   I     ++ + A WH +CF C  C  P+ D  FS+  N P
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHP 604



 Score = 35.9 bits (79), Expect = 0.018
 Identities = 17/64 (26%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
 Frame = +1

Query: 178 CHGCGDPITD-RVIQALGVAWHANHFVXXXXXXXXXXXXFMEQAGRPYCSACYADKFAAR 354
           C GC   I   R +  +G  WH   F             F      PY   CY ++F  +
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPK 617

Query: 355 CKGC 366
           C  C
Sbjct: 618 CDVC 621


>03_05_0383 +
           23656041-23656096,23657189-23657255,23657599-23657745,
           23658094-23658178,23658380-23658551,23660056-23660176,
           23660431-23660550,23660861-23661073,23661154-23661213,
           23661306-23661424,23661609-23661667,23661798-23662132
          Length = 517

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 355 CKGCLKPIVDKAVIA-LDAKWHRDCFTCMKCRNPVTD 462
           C GC  PI     ++ +D+ WH  CF C  C  P+++
Sbjct: 178 CAGCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPISE 214



 Score = 35.9 bits (79), Expect = 0.018
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 7   GCNTVI-QCRIVTALNKKWHPEHFTCNTCRKPIDGAKFHQHNNG 135
           GC T I Q R ++ ++  WHP+ F C  C +PI   +   + +G
Sbjct: 180 GCKTPIGQGRFLSCMDSVWHPQCFRCFACDRPISEYEIPTNKDG 223


>03_02_0476 +
           8768182-8768313,8768734-8768833,8768949-8768986,
           8769102-8769191,8769465-8769695
          Length = 196

 Score = 37.1 bits (82), Expect = 0.008
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +1

Query: 352 RCKGCLKPIVDKAVIALDAK-WHRDCFTCMKCRNPVTDSTFSVMDNQPLC 498
           +CK C K +     ++ D   +HR CF C  C++ ++   +S ++  P C
Sbjct: 8   KCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYC 57


>02_05_0094 -
           25758213-25758479,25758886-25758975,25759090-25759118,
           25759208-25759307,25759411-25759545
          Length = 206

 Score = 33.5 bits (73), Expect = 0.097
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 352 RCKGCLKPIVDKAVIALDA-KWHRDCFTCMKCRNPVTDSTFSVMDNQPLC 498
           +CK C K +    ++  D   +H+ CF C  C+  ++   +S MD    C
Sbjct: 9   KCKACDKTVHFIDLLTADGVSYHKTCFKCSHCKGTLSMCNYSSMDGVLYC 58


>10_08_0547 -
           18682357-18682683,18682971-18683060,18683279-18683301,
           18683397-18683496,18683615-18683749
          Length = 224

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 352 RCKGCLKPIVDKAVIALDA-KWHRDCFTCMKCRNPVTDSTFSVMDNQPLC 498
           +C  C K +    ++  D+  +H+ CF C  C+  ++  ++S MD    C
Sbjct: 9   KCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYC 58


>03_02_0490 -
           8840577-8840914,8841009-8841067,8841168-8841283,
           8841578-8841640,8841826-8842038,8842211-8842330,
           8842453-8842578,8842593-8842749,8842830-8842962,
           8843054-8843138,8843305-8843421
          Length = 508

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +1

Query: 355 CKGCLKPIVDKAVIA-LDAKWHRDCFTCMKCRNPVTD 462
           C GC   I     ++ L   WH  CF C  CR+P+ +
Sbjct: 114 CGGCKHEIGHGHYLSCLGMYWHPQCFRCSSCRHPIRE 150



 Score = 31.5 bits (68), Expect = 0.39
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 37  VTALNKKWHPEHFTCNTCRKPI 102
           ++ L   WHP+ F C++CR PI
Sbjct: 127 LSCLGMYWHPQCFRCSSCRHPI 148



 Score = 29.1 bits (62), Expect = 2.1
 Identities = 19/88 (21%), Positives = 29/88 (32%), Gaps = 3/88 (3%)
 Frame = +1

Query: 118 HQHNNGVHCVPCFAQHHSP---RCHGCGDPITDRVIQALGVAWHANHFVXXXXXXXXXXX 288
           H+  +G H + C   +  P   RC  C  PI +  +  L  +                  
Sbjct: 119 HEIGHG-HYLSCLGMYWHPQCFRCSSCRHPIREMEVTFLQFSLECLKVFSGSDSLLYSVS 177

Query: 289 XFMEQAGRPYCSACYADKFAARCKGCLK 372
            F      PY   CY +    +C  CL+
Sbjct: 178 QFTLLGTDPYHKLCYKELHHPKCDVCLQ 205


>06_01_0926 -
           7139220-7139318,7139394-7139478,7139573-7139643,
           7139996-7140076,7140805-7140895,7141242-7141330,
           7141749-7141802,7141906-7142085,7142175-7142237,
           7142575-7142705,7142807-7142900,7143343-7143684,
           7143957-7144348,7145010-7148487,7149101-7149187,
           7149324-7149367,7149495-7149591,7150429-7150572
          Length = 1873

 Score = 31.9 bits (69), Expect = 0.30
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 352 RCKGCLKPIVDKAVIALDAK-WHRDCFTCMKCRNPVTDSTFSVMDNQPLC 498
           +C  C + +     +A D + +HR CF C  C+  +  S +S ++    C
Sbjct: 12  KCDSCGRTVYPVEELAADGRVYHRPCFRCTHCKATLQFSNYSSVEGVLYC 61


>04_04_0611 -
           26594737-26594991,26595307-26595396,26595490-26595515,
           26595603-26595702,26595820-26595954
          Length = 201

 Score = 30.3 bits (65), Expect = 0.91
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 352 RCKGCLKPIVDKAVIALDA-KWHRDCFTCMKCRNPVTDSTFSVMDNQPLC 498
           +C  C K +    ++  D   +H+ CF C  C+  ++  ++S MD    C
Sbjct: 9   KCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYC 58



 Score = 27.1 bits (57), Expect = 8.5
 Identities = 11/50 (22%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +1

Query: 352 RCKGCLKPIVDKAVIALDAK-WHRDCFTCMKCRNPVTDSTFSVMDNQPLC 498
           +C  C K +     + L+ + +H+ CF C      +T S+++ ++    C
Sbjct: 104 KCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYC 153


>01_03_0303 +
           14792842-14792949,14793659-14793760,14794657-14794800,
           14794906-14794986,14795078-14795147,14795267-14795337,
           14795427-14795594,14796030-14796074,14796449-14796511,
           14796594-14796869,14797858-14797971,14798099-14798225,
           14798315-14798484,14798743-14798841,14799577-14799630,
           14801487-14801522,14801741-14801844,14801952-14802186,
           14802377-14802609,14802846-14803346,14803422-14803716,
           14805796-14805881,14806952-14807064,14807303-14807385,
           14808014-14808866,14809215-14809364,14809963-14811146
          Length = 1854

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +2

Query: 182 TAAVIPSLTA*SKHWAWRGTLTTSYAVVARRSSEAVDLWNRLDVRIARLATLTNSQPV 355
           T  +IP +    + WA +       A V RR  E V LWN L   +  + +L+N+ P+
Sbjct: 92  TVNLIPEVVGPHEEWALKSQTAALVAEVVRR--EGVALWNTL---LPSIVSLSNNGPI 144


>12_02_0498 +
           19721038-19721178,19721376-19721472,19721576-19721619,
           19722120-19722203,19722441-19722662
          Length = 195

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 37  VTALNKKWHPEHFTCNTCRKPIDGAKFHQHNNGVHCVPCFAQ 162
           +TA N+ +H   F C+ C+  +  A ++     ++C P F Q
Sbjct: 25  LTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQ 66


>01_06_0661 - 30977760-30977783,30977944-30978014,30978045-30979464
          Length = 504

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
 Frame = -1

Query: 339 VSVASRAIRTSSLFHKSTASELLLATTAYEVVSVPRHAQCLDHAVSDG---ITAAVAPRA 169
           V  A  +   S +  K++A  L L     E++S     Q L  +  +G   +   VAP+A
Sbjct: 356 VLCAKNSAPLSGVVSKASAGSLELI----ELLSCRNMMQFLSSSAENGWRVLGGTVAPKA 411

Query: 168 VMLSEAGYAVNTVVVLVELGT-IYGLAARVACEVFRVP 58
           + LSE      T++VL   GT +  L  R    + R+P
Sbjct: 412 IPLSEVVPGEPTILVLGSEGTGLRPLVERSCTHLVRIP 449


>01_06_0609 + 30583191-30583229,30583799-30583907,30584377-30585518
          Length = 429

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 57  VAPGTLHMQHVPQAHRWCQVPPAQ-QRCSLRTLLRSASQPAVPRLR*SH 200
           V PG++    + Q  R C+ PPAQ +R +  T L S    A   L  SH
Sbjct: 263 VKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDFATSSLGTSH 311


>05_06_0273 -
           26851077-26851167,26851433-26851869,26852125-26852271,
           26852352-26854415,26854792-26854908,26855007-26855093,
           26855350-26855439,26855523-26855609,26856736-26856810
          Length = 1064

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +2

Query: 260 VVARRSSEAVDLWNRLDVRIARLATLTNSQPV 355
           V+ RRS +  D   R ++R +RLAT + ++PV
Sbjct: 700 VITRRSIDIKDKLERPEIRPSRLATTSPAEPV 731


>03_02_0459 + 8649448-8651994
          Length = 848

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 61  HPEHFTCNTCRKPIDGAKFHQHNNGVH-CVPCFAQHHSP 174
           H  H TC+ CR PI G++F +  +    C  C+++   P
Sbjct: 773 HGRH-TCSICRYPIIGSRFKETKHSFSLCNRCYSEGKVP 810


>08_02_0685 +
           20039318-20040433,20040574-20040982,20042906-20042973,
           20043336-20043518,20043641-20043964,20045653-20045694
          Length = 713

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 22/99 (22%), Positives = 43/99 (43%)
 Frame = -1

Query: 435 ASEAIAMPFRV*SDYSFVDDGFQASLATGCEFVSVASRAIRTSSLFHKSTASELLLATTA 256
           A+EA+A+   V          F+A++    E ++VA+  +  ++L   +T +       A
Sbjct: 35  AAEAVAVGKAVAEAMEVAKAAFEAAMKKVAEALAVANEVMAKAALEAAATEAAAKEVAEA 94

Query: 255 YEVVSVPRHAQCLDHAVSDGITAAVAPRAVMLSEAGYAV 139
             V+     A  ++ A +  +  A A  A  ++ A  AV
Sbjct: 95  VAVLKAVLEAAAMEEAEAAAVAKAAAEAAEAVAVAKVAV 133


>06_01_0326 + 2372176-2373057,2373146-2373610
          Length = 448

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +2

Query: 170 ARGATAAVIPSLTA*SKHWAWRGTLTTSYAVVARRSSEAVDLWNRLDVRIARLATLT 340
           A  ATA ++ ++TA  ++WA R  +  S+   A   S+ V + NR +  +    T T
Sbjct: 24  AATATATLVGNITADEEYWAKRSEVARSFNRAA-YVSDPVAVLNRFNEDVLNTTTAT 79


>02_05_0497 -
           29502012-29502101,29502128-29502197,29502302-29502411,
           29502530-29502641,29503341-29503498,29503592-29503807,
           29504127-29504354,29504722-29504801,29504886-29505056,
           29505179-29505281,29505369-29505551,29506313-29506813,
           29506935-29507100,29507517-29507566,29508047-29508127,
           29508291-29508398,29508874-29508939,29509053-29509109,
           29509442-29509507,29509917-29510006,29510850-29510975,
           29511681-29511717,29512192-29512250,29512562-29512615,
           29513294-29513428,29513542-29513612,29513720-29513957
          Length = 1141

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -1

Query: 231 HAQCLDHAVSDGITAAVAPRAVMLSEAGYAVNTVVVLVELGTIYGLA 91
           H+ CL     D  T AV+   +MLS A Y +     +V L  ++  A
Sbjct: 661 HSDCLGLVAVDRNTVAVSISDIMLSFAAYPIEIPAEVVFLHPVHNFA 707


>12_01_0088 - 698169-698614,699514-700819,703041-703148
          Length = 619

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 378 RRQSCNRSRREMASRLLHLHEMQKSSDRLYLLCYG 482
           RR S NRS  +M S+LLH   +++ + RL+    G
Sbjct: 545 RRMSRNRSMVDMRSQLLHRTLVEELNKRLFFNTVG 579


>11_01_0087 - 654461-654912,655878-657186,659080-659187
          Length = 622

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 378 RRQSCNRSRREMASRLLHLHEMQKSSDRLYLLCYG 482
           RR S NRS  +M S+LLH   +++ + RL+    G
Sbjct: 549 RRMSRNRSMVDMRSQLLHRTLVEELNKRLFFNTVG 583


>05_01_0013 - 85732-86829
          Length = 365

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +3

Query: 345 RSPLQGMPETHRRQSCNRSRREMASRLLHLHEMQKSSD-RLYLLC 476
           R+P    P   R      S    +SR+LH +  Q  +D RL+L C
Sbjct: 169 RAPADAAPNEGRMYVSASSSSSSSSRVLHAYRAQFQADFRLFLSC 213


>02_01_0602 + 4481869-4482111,4482315-4482472,4482603-4483467
          Length = 421

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 75  HMQHVPQAHRWCQVPPAQQRCSLRTLLRSAS 167
           H   VP+AHR  Q+PP     +   LL +A+
Sbjct: 195 HRARVPRAHRVLQLPPPLAAAAYAALLPAAA 225


>01_06_0586 +
           30420745-30421350,30421933-30422172,30422770-30422919,
           30423429-30423553,30423957-30423990,30424163-30424288
          Length = 426

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 164 C*AKQGTQ*TPLLCWWNLAPSMGLRHVLHVKCSG 63
           C  KQGT+ TP+  W + + S G+   L  K SG
Sbjct: 331 CKNKQGTRFTPMFQWPDKSLSFGVTQALAWKRSG 364


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,745,939
Number of Sequences: 37544
Number of extensions: 356496
Number of successful extensions: 1179
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1179
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1059318940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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