Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_D15
         (382 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051856-1|AAK93280.1|  874|Drosophila melanogaster LD35413p pro...    31   0.50 
AE014297-1407|AAO41547.1|  514|Drosophila melanogaster CG31211-P...    31   0.50 
AE014297-1406|AAF54719.2|  874|Drosophila melanogaster CG31211-P...    31   0.50 
AE014297-1405|AAO41546.1|  893|Drosophila melanogaster CG31211-P...    31   0.50 

>AY051856-1|AAK93280.1|  874|Drosophila melanogaster LD35413p
           protein.
          Length = 874

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -2

Query: 249 LSVRQARSSH*VCVRQMHLSQ*QHQRIAPVSLHLHSPPLVQPCKLPPCIIPNT 91
           L+V      H     Q+   Q Q Q+ AP   H H PP  QP   P  + P+T
Sbjct: 215 LNVSNPNEPHQQLQLQLQAHQQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHT 267


>AE014297-1407|AAO41547.1|  514|Drosophila melanogaster CG31211-PC,
           isoform C protein.
          Length = 514

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -2

Query: 249 LSVRQARSSH*VCVRQMHLSQ*QHQRIAPVSLHLHSPPLVQPCKLPPCIIPNT 91
           L+V      H     Q+   Q Q Q+ AP   H H PP  QP   P  + P+T
Sbjct: 215 LNVSNPNEPHQQLQLQLQAHQQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHT 267


>AE014297-1406|AAF54719.2|  874|Drosophila melanogaster CG31211-PA,
           isoform A protein.
          Length = 874

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -2

Query: 249 LSVRQARSSH*VCVRQMHLSQ*QHQRIAPVSLHLHSPPLVQPCKLPPCIIPNT 91
           L+V      H     Q+   Q Q Q+ AP   H H PP  QP   P  + P+T
Sbjct: 215 LNVSNPNEPHQQLQLQLQAHQQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHT 267


>AE014297-1405|AAO41546.1|  893|Drosophila melanogaster CG31211-PB,
           isoform B protein.
          Length = 893

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = -2

Query: 249 LSVRQARSSH*VCVRQMHLSQ*QHQRIAPVSLHLHSPPLVQPCKLPPCIIPNT 91
           L+V      H     Q+   Q Q Q+ AP   H H PP  QP   P  + P+T
Sbjct: 215 LNVSNPNEPHQQLQLQLQAHQQQQQQHAPQPTHPHHPPAHQPHAHPHHLTPHT 267


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,395,624
Number of Sequences: 53049
Number of extensions: 297042
Number of successful extensions: 707
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 707
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)