Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_D14
(435 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-l... 88 1e-17
AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-l... 88 1e-17
BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60 (ATPase-con... 83 4e-16
AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60 (ATPase-con... 83 4e-16
AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein. 83 4e-16
BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein. 44 2e-04
AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein. 44 2e-04
AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein. 44 2e-04
AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein. 44 2e-04
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 42 0.001
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 42 0.001
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 42 0.001
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 42 0.001
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 42 0.001
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 42 0.001
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 42 0.001
AK025747-1|BAB15231.1| 171|Homo sapiens protein ( Homo sapiens ... 35 0.11
AK001267-1|BAA91590.1| 639|Homo sapiens protein ( Homo sapiens ... 35 0.11
AC093727-1|AAX81992.1| 639|Homo sapiens unknown protein. 35 0.11
Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein p... 34 0.24
D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42 pr... 34 0.24
CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein. 34 0.24
BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome, ma... 34 0.24
BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene... 34 0.24
BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase ... 34 0.24
BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome, ma... 34 0.24
AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulato... 34 0.24
BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein. 33 0.42
BC010868-1|AAH10868.1| 151|Homo sapiens ATAD1 protein protein. 33 0.42
AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA doma... 33 0.42
AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens ... 33 0.42
AK027506-1|BAB55161.1| 151|Homo sapiens protein ( Homo sapiens ... 33 0.42
BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sortin... 31 1.3
AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing... 31 1.3
AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sortin... 31 1.3
AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein. 31 1.3
AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing prot... 31 1.7
U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein. 30 4.0
L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interact... 30 4.0
D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p4... 30 4.0
BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome, ma... 30 4.0
BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-l... 30 4.0
BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome, ma... 30 4.0
BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome, ma... 30 4.0
BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome, ma... 30 4.0
BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome, ma... 30 4.0
BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome, ma... 30 4.0
AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens ... 30 4.0
AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein. 30 4.0
AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo sa... 30 4.0
BC033791-1|AAH33791.1| 571|Homo sapiens ring finger protein 168... 29 6.9
AK093113-1|BAC04060.1| 552|Homo sapiens protein ( Homo sapiens ... 29 6.9
AK054732-1|BAB70801.1| 405|Homo sapiens protein ( Homo sapiens ... 29 6.9
BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 29 9.1
BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 29 9.1
BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S. cerevis... 29 9.1
AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein. 29 9.1
AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 29 9.1
AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S. cerevis... 29 9.1
AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S. cerevis... 29 9.1
AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S. cerevis... 29 9.1
AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens ... 29 9.1
AJ295618-1|CAB99462.1| 517|Homo sapiens putative ATPases protein. 29 9.1
AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent metallopr... 29 9.1
AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associa... 29 9.1
AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent metallopr... 29 9.1
AB046838-1|BAB13444.1| 1415|Homo sapiens KIAA1618 protein protein. 29 9.1
>BC000612-1|AAH00612.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 87.8 bits (208), Expect = 1e-17
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +3
Query: 114 RDASMMSMRRKIAGLKPEQIKQLAKEELDLPVTKQDFMEALAKCNKSVSNGDIQKYLSWM 293
RDAS+M+MRR+I GL PE+I+ L+KEEL +PVTK DF AL K KSVS D++KY WM
Sbjct: 425 RDASLMAMRRRINGLSPEEIRALSKEELQMPVTKGDFELALKKIAKSVSAADLEKYEKWM 484
Query: 294 TEFGSS 311
EFGS+
Sbjct: 485 VEFGSA 490
Score = 57.6 bits (133), Expect = 2e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 14 INLREVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
INLREV+LDP++ L IA+K++GYSGADITNVC+
Sbjct: 392 INLREVELDPDIQLEDIAEKIEGYSGADITNVCR 425
>AL356750-1|CAI13718.1| 490|Homo sapiens katanin p60 subunit A-like
1 protein.
Length = 490
Score = 87.8 bits (208), Expect = 1e-17
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +3
Query: 114 RDASMMSMRRKIAGLKPEQIKQLAKEELDLPVTKQDFMEALAKCNKSVSNGDIQKYLSWM 293
RDAS+M+MRR+I GL PE+I+ L+KEEL +PVTK DF AL K KSVS D++KY WM
Sbjct: 425 RDASLMAMRRRINGLSPEEIRALSKEELQMPVTKGDFELALKKIAKSVSAADLEKYEKWM 484
Query: 294 TEFGSS 311
EFGS+
Sbjct: 485 VEFGSA 490
Score = 57.6 bits (133), Expect = 2e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 14 INLREVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
INLREV+LDP++ L IA+K++GYSGADITNVC+
Sbjct: 392 INLREVELDPDIQLEDIAEKIEGYSGADITNVCR 425
>BX276089-2|CAI16431.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 83.0 bits (196), Expect = 4e-16
Identities = 37/65 (56%), Positives = 50/65 (76%)
Frame = +3
Query: 114 RDASMMSMRRKIAGLKPEQIKQLAKEELDLPVTKQDFMEALAKCNKSVSNGDIQKYLSWM 293
RDAS+M+MRR+I GL PE+I+ L+KEE+ +P T +DF AL K +KSVS DI++Y W+
Sbjct: 426 RDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMALKKVSKSVSAADIERYEKWI 485
Query: 294 TEFGS 308
EFGS
Sbjct: 486 FEFGS 490
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/36 (58%), Positives = 31/36 (86%)
Frame = +2
Query: 8 VHINLREVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
+ I+LRE++L +VDL +IA+ ++GYSGADITNVC+
Sbjct: 391 LRISLRELELADDVDLASIAENMEGYSGADITNVCR 426
>AL078581-2|CAI19505.1| 491|Homo sapiens katanin p60
(ATPase-containing) subunit A 1 protein.
Length = 491
Score = 83.0 bits (196), Expect = 4e-16
Identities = 37/65 (56%), Positives = 50/65 (76%)
Frame = +3
Query: 114 RDASMMSMRRKIAGLKPEQIKQLAKEELDLPVTKQDFMEALAKCNKSVSNGDIQKYLSWM 293
RDAS+M+MRR+I GL PE+I+ L+KEE+ +P T +DF AL K +KSVS DI++Y W+
Sbjct: 426 RDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMALKKVSKSVSAADIERYEKWI 485
Query: 294 TEFGS 308
EFGS
Sbjct: 486 FEFGS 490
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/36 (58%), Positives = 31/36 (86%)
Frame = +2
Query: 8 VHINLREVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
+ I+LRE++L +VDL +IA+ ++GYSGADITNVC+
Sbjct: 391 LRISLRELELADDVDLASIAENMEGYSGADITNVCR 426
>AF056022-1|AAC25114.1| 491|Homo sapiens p60 katanin protein.
Length = 491
Score = 83.0 bits (196), Expect = 4e-16
Identities = 37/65 (56%), Positives = 50/65 (76%)
Frame = +3
Query: 114 RDASMMSMRRKIAGLKPEQIKQLAKEELDLPVTKQDFMEALAKCNKSVSNGDIQKYLSWM 293
RDAS+M+MRR+I GL PE+I+ L+KEE+ +P T +DF AL K +KSVS DI++Y W+
Sbjct: 426 RDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMALKKVSKSVSAADIERYEKWI 485
Query: 294 TEFGS 308
EFGS
Sbjct: 486 FEFGS 490
Score = 50.0 bits (114), Expect = 3e-06
Identities = 21/36 (58%), Positives = 31/36 (86%)
Frame = +2
Query: 8 VHINLREVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
+ I+LRE++L +VDL +IA+ ++GYSGADITNVC+
Sbjct: 391 LRISLRELELADDVDLASIAENMEGYSGADITNVCR 426
>BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein.
Length = 584
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +3
Query: 111 ARDASMMSMRRKIAGLKPEQIKQLAKEELDLPVTKQDFMEALAKCNKSVSNGDIQKYLSW 290
A+DA++ +R LKPEQ+K ++ E+ + DF E+L K +SVS ++ Y+ W
Sbjct: 521 AKDAALGPIRE----LKPEQVKNMSASEMR-NIRLSDFTESLKKIKRSVSPQTLEAYIRW 575
Query: 291 MTEFGSS 311
+FG +
Sbjct: 576 NKDFGDT 582
>AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +3
Query: 111 ARDASMMSMRRKIAGLKPEQIKQLAKEELDLPVTKQDFMEALAKCNKSVSNGDIQKYLSW 290
A+DA++ +R LKPEQ+K ++ E+ + DF E+L K +SVS ++ Y+ W
Sbjct: 553 AKDAALGPIRE----LKPEQVKNMSASEMR-NIRLSDFTESLKKIKRSVSPQTLEAYIRW 607
Query: 291 MTEFGSS 311
+FG +
Sbjct: 608 NKDFGDT 614
>AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +3
Query: 111 ARDASMMSMRRKIAGLKPEQIKQLAKEELDLPVTKQDFMEALAKCNKSVSNGDIQKYLSW 290
A+DA++ +R LKPEQ+K ++ E+ + DF E+L K +SVS ++ Y+ W
Sbjct: 553 AKDAALGPIRE----LKPEQVKNMSASEMR-NIRLSDFTESLKKIKRSVSPQTLEAYIRW 607
Query: 291 MTEFGSS 311
+FG +
Sbjct: 608 NKDFGDT 614
>AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein.
Length = 584
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +3
Query: 111 ARDASMMSMRRKIAGLKPEQIKQLAKEELDLPVTKQDFMEALAKCNKSVSNGDIQKYLSW 290
A+DA++ +R LKPEQ+K ++ E+ + DF E+L K +SVS ++ Y+ W
Sbjct: 521 AKDAALGPIRE----LKPEQVKNMSASEMR-NIRLSDFTESLKKIKRSVSPQTLEAYIRW 575
Query: 291 MTEFGSS 311
+FG +
Sbjct: 576 NKDFGDT 582
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 17 NLREVKLDPEVDLRAIAKKLDGYSGADITNVCQR 118
NLR+ + +VDL +AK +G+SGAD+T +CQR
Sbjct: 329 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQR 362
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 8 VHINLREVKLDPEVDLRAIAKKLDGYSGADITNVC 112
+ I+ + +KL +VDL +A + G+ GAD+ +C
Sbjct: 50 LQIHTKNMKLADDVDLEQVANETHGHVGADLAALC 84
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 17 NLREVKLDPEVDLRAIAKKLDGYSGADITNVCQR 118
NLR+ + +VDL +AK +G+SGAD+T +CQR
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQR 693
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 8 VHINLREVKLDPEVDLRAIAKKLDGYSGADITNVC 112
+ I+ + +KL +VDL +A + G+ GAD+ +C
Sbjct: 381 LQIHTKNMKLADDVDLEQVANETHGHVGADLAALC 415
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 17 NLREVKLDPEVDLRAIAKKLDGYSGADITNVCQR 118
NLR+ + +VDL +AK +G+SGAD+T +CQR
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQR 693
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 8 VHINLREVKLDPEVDLRAIAKKLDGYSGADITNVC 112
+ I+ + +KL +VDL +A + G+ GAD+ +C
Sbjct: 381 LQIHTKNMKLADDVDLEQVANETHGHVGADLAALC 415
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 17 NLREVKLDPEVDLRAIAKKLDGYSGADITNVCQR 118
NLR+ + +VDL +AK +G+SGAD+T +CQR
Sbjct: 498 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQR 531
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 8 VHINLREVKLDPEVDLRAIAKKLDGYSGADITNVC 112
+ I+ + +KL +VDL +A + G+ GAD+ +C
Sbjct: 219 LQIHTKNMKLADDVDLEQVANETHGHVGADLAALC 253
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 17 NLREVKLDPEVDLRAIAKKLDGYSGADITNVCQR 118
NLR+ + +VDL +AK +G+SGAD+T +CQR
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQR 693
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 8 VHINLREVKLDPEVDLRAIAKKLDGYSGADITNVC 112
+ I+ + +KL +VDL +A + G+ GAD+ +C
Sbjct: 381 LQIHTKNMKLADDVDLEQVANETHGHVGADLAALC 415
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 17 NLREVKLDPEVDLRAIAKKLDGYSGADITNVCQR 118
NLR+ + +VDL +AK +G+SGAD+T +CQR
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQR 693
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 8 VHINLREVKLDPEVDLRAIAKKLDGYSGADITNVC 112
+ I+ + +KL +VDL +A + G+ GAD+ +C
Sbjct: 381 LQIHTKNMKLADDVDLEQVANETHGHVGADLAALC 415
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +2
Query: 17 NLREVKLDPEVDLRAIAKKLDGYSGADITNVCQR 118
NLR+ + +VDL +AK +G+SGAD+T +CQR
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQR 693
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 8 VHINLREVKLDPEVDLRAIAKKLDGYSGADITNVC 112
+ I+ + +KL +VDL +A + G+ GAD+ +C
Sbjct: 381 LQIHTKNMKLADDVDLEQVANETHGHVGADLAALC 415
>AK025747-1|BAB15231.1| 171|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22094 fis, clone HEP16856. ).
Length = 171
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 204 PVTKQDFMEALAKCNKSVSNGDIQKYLSWMTEFGSS 311
PVT QDF A K S+S ++ Y+ W FG S
Sbjct: 135 PVTYQDFENAFCKIQPSISQKELDMYVEWNKMFGCS 170
>AK001267-1|BAA91590.1| 639|Homo sapiens protein ( Homo sapiens
cDNA FLJ10405 fis, clone NT2RM4000496, weakly similar to
SAP1 PROTEIN. ).
Length = 639
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 204 PVTKQDFMEALAKCNKSVSNGDIQKYLSWMTEFGSS 311
PVT QDF A K S+S ++ Y+ W FG S
Sbjct: 603 PVTYQDFENAFCKIQPSISQKELDMYVEWNKMFGCS 638
>AC093727-1|AAX81992.1| 639|Homo sapiens unknown protein.
Length = 639
Score = 35.1 bits (77), Expect = 0.11
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 204 PVTKQDFMEALAKCNKSVSNGDIQKYLSWMTEFGSS 311
PVT QDF A K S+S ++ Y+ W FG S
Sbjct: 603 PVTYQDFENAFCKIQPSISQKELDMYVEWNKMFGCS 638
>Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein
protein.
Length = 797
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = +2
Query: 14 INLREVKLDPEVDLRAIAKKL----DGYSGADITNVC 112
++LR +KLD ++ +A+KL G+SGAD+ NVC
Sbjct: 489 VHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVC 525
>D78275-1|BAA11338.1| 389|Homo sapiens proteasome subunit p42
protein.
Length = 389
Score = 33.9 bits (74), Expect = 0.24
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 44 EVDLRAIAKKLDGYSGADITNVC 112
E+D AI K DG++GAD+ NVC
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVC 347
>CR456709-1|CAG32990.1| 389|Homo sapiens PSMC6 protein.
Length = 389
Score = 33.9 bits (74), Expect = 0.24
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 44 EVDLRAIAKKLDGYSGADITNVC 112
E+D AI K DG++GAD+ NVC
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVC 347
>BT006843-1|AAP35489.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 33.9 bits (74), Expect = 0.24
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 44 EVDLRAIAKKLDGYSGADITNVC 112
E+D AI K DG++GAD+ NVC
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVC 347
>BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene
3-like 2 (yeast) protein.
Length = 797
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = +2
Query: 14 INLREVKLDPEVDLRAIAKKL----DGYSGADITNVC 112
++LR +KLD ++ +A+KL G+SGAD+ NVC
Sbjct: 489 VHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVC 525
>BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase
family gene 3-like 2 (yeast) protein.
Length = 812
Score = 33.9 bits (74), Expect = 0.24
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = +2
Query: 14 INLREVKLDPEVDLRAIAKKL----DGYSGADITNVC 112
++LR +KLD ++ +A+KL G+SGAD+ NVC
Sbjct: 504 VHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVC 540
>BC005390-1|AAH05390.1| 389|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 6 protein.
Length = 389
Score = 33.9 bits (74), Expect = 0.24
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 44 EVDLRAIAKKLDGYSGADITNVC 112
E+D AI K DG++GAD+ NVC
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVC 347
>AF006305-1|AAB61616.1| 389|Homo sapiens 26S proteasome regulatory
subunit protein.
Length = 389
Score = 33.9 bits (74), Expect = 0.24
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 44 EVDLRAIAKKLDGYSGADITNVC 112
E+D AI K DG++GAD+ NVC
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVC 347
>BC063530-1|AAH63530.1| 330|Homo sapiens ATAD1 protein protein.
Length = 330
Score = 33.1 bits (72), Expect = 0.42
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
L+ +D VDL +A++ DG+SG+D+ +C+
Sbjct: 242 LKNENVDRHVDLLEVAQETDGFSGSDLKEMCR 273
>BC010868-1|AAH10868.1| 151|Homo sapiens ATAD1 protein protein.
Length = 151
Score = 33.1 bits (72), Expect = 0.42
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
L+ +D VDL +A++ DG+SG+D+ +C+
Sbjct: 63 LKNENVDRHVDLLEVAQETDGFSGSDLKEMCR 94
>AL133327-1|CAI16701.1| 361|Homo sapiens ATPase family, AAA domain
containing 1 protein.
Length = 361
Score = 33.1 bits (72), Expect = 0.42
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
L+ +D VDL +A++ DG+SG+D+ +C+
Sbjct: 273 LKNENVDRHVDLLEVAQETDGFSGSDLKEMCR 304
>AK075223-1|BAC11482.1| 361|Homo sapiens protein ( Homo sapiens
cDNA FLJ90742 fis, clone PLACE1011181, weakly similar to
MSP1 PROTEIN HOMOLOG. ).
Length = 361
Score = 33.1 bits (72), Expect = 0.42
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
L+ +D VDL +A++ DG+SG+D+ +C+
Sbjct: 273 LKNENVDRHVDLLEVAQETDGFSGSDLKEMCR 304
>AK027506-1|BAB55161.1| 151|Homo sapiens protein ( Homo sapiens
cDNA FLJ14600 fis, clone NT2RM4002594, moderately
similar to MSP1 PROTEIN HOMOLOG. ).
Length = 151
Score = 33.1 bits (72), Expect = 0.42
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
L+ +D VDL +A++ DG+SG+D+ +C+
Sbjct: 63 LKNENVDRHVDLLEVAQETDGFSGSDLKEMCR 94
>BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sorting 4
homolog B (S. cerevisiae) protein.
Length = 444
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 5 EVHINLREVKLDPEVDLRAIAKKLDGYSGADIT 103
++H+ + L E D R + +K DGYSGADI+
Sbjct: 311 KLHLGTTQNSLT-EADFRELGRKTDGYSGADIS 342
>AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing 1
protein.
Length = 444
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 5 EVHINLREVKLDPEVDLRAIAKKLDGYSGADIT 103
++H+ + L E D R + +K DGYSGADI+
Sbjct: 311 KLHLGTTQNSLT-EADFRELGRKTDGYSGADIS 342
>AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sorting
factor 4B protein.
Length = 444
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 5 EVHINLREVKLDPEVDLRAIAKKLDGYSGADIT 103
++H+ + L E D R + +K DGYSGADI+
Sbjct: 311 KLHLGTTQNSLT-EADFRELGRKTDGYSGADIS 342
>AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein.
Length = 444
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 5 EVHINLREVKLDPEVDLRAIAKKLDGYSGADIT 103
++H+ + L E D R + +K DGYSGADI+
Sbjct: 311 KLHLGTTQNSLT-EADFRELGRKTDGYSGADIS 342
>AF313486-1|AAG29874.1| 305|Homo sapiens valosin-containing protein
protein.
Length = 305
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 8 VHINLREVKLDPEVDLRAIAKKLDGYSGADITNVC 112
+ I+ + +KL +VDL +A + G+ GAD+ +C
Sbjct: 9 LQIHTKNMKLADDVDLEQVANETHGHVGADLAALC 43
>U27515-1|AAC99817.1| 418|Homo sapiens MIP224 protein.
Length = 418
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 26 EVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
++ L EVDL + D SGADI ++CQ
Sbjct: 351 KMNLSEEVDLEDYVARPDKISGADINSICQ 380
>L38810-1|AAC41735.1| 406|Homo sapiens thyroid receptor interactor
protein.
Length = 406
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 14 INLREVKLDPEVDLRAIAKKLDGYSGADITNVC 112
I+ R++ L ++LR IA+ + G SGA++ VC
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVC 363
>D44467-1|BAA07919.1| 406|Homo sapiens 26S proteasome subunit p45
protein.
Length = 406
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 14 INLREVKLDPEVDLRAIAKKLDGYSGADITNVC 112
I+ R++ L ++LR IA+ + G SGA++ VC
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVC 363
>BT007232-1|AAP35896.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 26 EVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
++ L EVDL + D SGADI ++CQ
Sbjct: 351 KMNLSEEVDLEDYVARPDKISGADINSICQ 380
>BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-like
2 protein.
Length = 466
Score = 29.9 bits (64), Expect = 4.0
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 23 REVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
R ++L E++ ++++ +GYSG+DI VC+
Sbjct: 371 RALELHTELEYSVLSQETEGYSGSDIKLVCR 401
>BC014488-1|AAH14488.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 26 EVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
++ L EVDL + D SGADI ++CQ
Sbjct: 351 KMNLSEEVDLEDYVARPDKISGADINSICQ 380
>BC010396-1|AAH10396.1| 387|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 387
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 26 EVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
++ L EVDL + D SGADI ++CQ
Sbjct: 320 KMNLSEEVDLEDYVARPDKISGADINSICQ 349
>BC002367-1|AAH02367.3| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 14 INLREVKLDPEVDLRAIAKKLDGYSGADITNVC 112
I+ R++ L ++LR IA+ + G SGA++ VC
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVC 363
>BC001932-1|AAH01932.1| 406|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 5 protein.
Length = 406
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 14 INLREVKLDPEVDLRAIAKKLDGYSGADITNVC 112
I+ R++ L ++LR IA+ + G SGA++ VC
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVC 363
>BC000343-1|AAH00343.1| 418|Homo sapiens proteasome (prosome,
macropain) 26S subunit, ATPase, 4 protein.
Length = 418
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 26 EVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
++ L EVDL + D SGADI ++CQ
Sbjct: 351 KMNLSEEVDLEDYVARPDKISGADINSICQ 380
>AF035309-1|AAB88187.1| 280|Homo sapiens protein ( Homo sapiens
clone 23598 mRNA, complete cds. ).
Length = 280
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 14 INLREVKLDPEVDLRAIAKKLDGYSGADITNVC 112
I+ R++ L ++LR IA+ + G SGA++ VC
Sbjct: 205 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVC 237
>AF020736-1|AAC32612.1| 418|Homo sapiens ATPase homolog protein.
Length = 418
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 26 EVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
++ L EVDL + D SGADI ++CQ
Sbjct: 351 KMNLSEEVDLEDYVARPDKISGADINSICQ 380
>AC007842-2|AAD39267.1| 418|Homo sapiens ATPase homolog [Homo
sapiens] protein.
Length = 418
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 26 EVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
++ L EVDL + D SGADI ++CQ
Sbjct: 351 KMNLSEEVDLEDYVARPDKISGADINSICQ 380
>BC033791-1|AAH33791.1| 571|Homo sapiens ring finger protein 168
protein.
Length = 571
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 246 NKSVSNGDIQKYLSWMTEFGSS 311
NK + GDIQKYL+ ++FGS+
Sbjct: 217 NKQRNTGDIQKYLTPKSQFGSA 238
>AK093113-1|BAC04060.1| 552|Homo sapiens protein ( Homo sapiens
cDNA FLJ35794 fis, clone TESTI2005788. ).
Length = 552
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 246 NKSVSNGDIQKYLSWMTEFGSS 311
NK + GDIQKYL+ ++FGS+
Sbjct: 198 NKQRNTGDIQKYLTPKSQFGSA 219
>AK054732-1|BAB70801.1| 405|Homo sapiens protein ( Homo sapiens
cDNA FLJ30170 fis, clone BRACE2000885, weakly similar to
CALDESMON. ).
Length = 405
Score = 29.1 bits (62), Expect = 6.9
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 246 NKSVSNGDIQKYLSWMTEFGSS 311
NK + GDIQKYL+ ++FGS+
Sbjct: 217 NKQRNTGDIQKYLTPKSQFGSA 238
>BC024032-1|AAH24032.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNV 109
L ++K D VD IA+ G+SGA++ N+
Sbjct: 463 LNKIKFDQSVDPEIIARGTVGFSGAELENL 492
>BC023507-1|AAH23507.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNV 109
L ++K D VD IA+ G+SGA++ N+
Sbjct: 463 LNKIKFDQSVDPEIIARGTVGFSGAELENL 492
>BC007795-1|AAH07795.1| 740|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 740
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNV 109
L ++K D VD IA+ G+SGA++ N+
Sbjct: 520 LNKIKFDQSVDPEIIARGTVGFSGAELENL 549
>AY358484-1|AAQ88848.1| 716|Homo sapiens YME1L1 protein.
Length = 716
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNV 109
L ++K D VD IA+ G+SGA++ N+
Sbjct: 463 LNKIKFDQSVDPEIIARGTVGFSGAELENL 492
>AL162272-2|CAI12217.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNV 109
L ++K D VD IA+ G+SGA++ N+
Sbjct: 463 LNKIKFDQSVDPEIIARGTVGFSGAELENL 492
>AL162272-1|CAC19650.2| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNV 109
L ++K D VD IA+ G+SGA++ N+
Sbjct: 520 LNKIKFDQSVDPEIIARGTVGFSGAELENL 549
>AL160291-4|CAI16906.1| 716|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 716
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNV 109
L ++K D VD IA+ G+SGA++ N+
Sbjct: 463 LNKIKFDQSVDPEIIARGTVGFSGAELENL 492
>AL160291-3|CAI16907.1| 773|Homo sapiens YME1-like 1 (S.
cerevisiae) protein.
Length = 773
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNV 109
L ++K D VD IA+ G+SGA++ N+
Sbjct: 520 LNKIKFDQSVDPEIIARGTVGFSGAELENL 549
>AK091384-1|BAC03651.1| 893|Homo sapiens protein ( Homo sapiens
cDNA FLJ34065 fis, clone FCBBF3000536, highly similar to
Mus musculus spermatogenesis associated factor (SPAF)
mRNA. ).
Length = 893
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 14 INLREVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
+ + + EVDL + + D YSGA+I VC+
Sbjct: 808 LQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCR 841
>AJ295618-1|CAB99462.1| 517|Homo sapiens putative ATPases protein.
Length = 517
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNV 109
L ++K D VD IA+ G+SGA++ N+
Sbjct: 266 LNKIKFDQSVDPEIIARGTVGFSGAELENL 295
>AJ132637-1|CAB51858.1| 716|Homo sapiens ATP-dependent
metalloprotease YME1L protein.
Length = 716
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNV 109
L ++K D VD IA+ G+SGA++ N+
Sbjct: 463 LNKIKFDQSVDPEIIARGTVGFSGAELENL 492
>AF361489-1|AAM00262.1| 893|Homo sapiens spermatogenesis associated
factor protein.
Length = 893
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 14 INLREVKLDPEVDLRAIAKKLDGYSGADITNVCQ 115
+ + + EVDL + + D YSGA+I VC+
Sbjct: 808 LQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCR 841
>AF151782-1|AAK57555.1| 773|Homo sapiens ATP-dependent
metalloprotease FtsH1 homolog protein.
Length = 773
Score = 28.7 bits (61), Expect = 9.1
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 20 LREVKLDPEVDLRAIAKKLDGYSGADITNV 109
L ++K D VD IA+ G+SGA++ N+
Sbjct: 520 LNKIKFDQSVDPEIIARGTVGFSGAELENL 549
>AB046838-1|BAB13444.1| 1415|Homo sapiens KIAA1618 protein protein.
Length = 1415
Score = 28.7 bits (61), Expect = 9.1
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = -3
Query: 319 LNQEEPNSVIHDRYFCISPLETDLLHLASA-SMKSCLVTGKSNSSLASCLICSGFRPAIL 143
L +EEP S I +C S +T L + A + + C++ S++ + I GF + L
Sbjct: 830 LTKEEPLSQI--TAYCNSCWDTKGLEDSVAKTFEKCIIEAVSSACQSQTSILQGFSYSDL 887
Query: 142 RRIDIIDASLANVSYVRT 89
R+ I+ +++ S+ RT
Sbjct: 888 RKFGIVLSAVITKSWPRT 905
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,749,017
Number of Sequences: 237096
Number of extensions: 1303180
Number of successful extensions: 3229
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 3069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3225
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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