Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_D14
         (435 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   2.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   3.4  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   3.4  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   3.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   6.0  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    21   7.9  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   7.9  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = +3

Query: 210 TKQDFMEALAKCNKS 254
           T++ F++ +A+CNK+
Sbjct: 93  TREQFIDMVARCNKA 107


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = -2

Query: 101  LCPHPNNHLISLRSRVNP 48
            +CP+   HL+  R  ++P
Sbjct: 1722 ICPYATFHLLGFREEMDP 1739



 Score = 20.6 bits (41), Expect = 7.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 231 ALAKCNKSVSNGDIQKYLSWMTEFG 305
           A+ KC       D  K LSW T+ G
Sbjct: 120 AILKCVVPSFVADFVKVLSWHTDQG 144


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -2

Query: 260 GDRLVT-LGKCLHEVLLGDGQVQLFLG 183
           G+R  T LG CL ++   DG   L+ G
Sbjct: 152 GEREFTGLGNCLTKIFKADGITGLYRG 178


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -2

Query: 260 GDRLVT-LGKCLHEVLLGDGQVQLFLG 183
           G+R  T LG CL ++   DG   L+ G
Sbjct: 152 GEREFTGLGNCLTKIFKADGITGLYRG 178


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = +2

Query: 23  REVKLDPEVDLRAIAKKLDGYSGADITNVCQRCINDVDAT*NSRSETGTNQ 175
           R  +L P   L+   + ++     +  N  QR       T NSR E GTN+
Sbjct: 194 RSPELVPMPTLKGDGRHMEVIKIKNFDNCDQRINYHFGMTDNSRLEPGTNK 244


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 319 LNQEEPNSVIHDRY 278
           L +E PNS+I D+Y
Sbjct: 169 LQKEIPNSIILDQY 182


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 410 THISLLCIILC 378
           T +SLLC+I C
Sbjct: 4   TIVSLLCVIYC 14


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 410 THISLLCIILC 378
           T +SLLC+I C
Sbjct: 4   TIVSLLCVIYC 14


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,107
Number of Sequences: 438
Number of extensions: 2457
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)