BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_D13
(611 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ062780-1|AAY56653.1| 953|Drosophila melanogaster saposin-rela... 75 6e-14
AF145647-1|AAD38622.1| 953|Drosophila melanogaster BcDNA.GH0831... 75 6e-14
AE014297-4677|AAF57097.1| 953|Drosophila melanogaster CG12070-P... 75 6e-14
>DQ062780-1|AAY56653.1| 953|Drosophila melanogaster saposin-related
protein protein.
Length = 953
Score = 75.4 bits (177), Expect = 6e-14
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Frame = +3
Query: 171 LFSVAILCCSNLSFARQVP----KECSKGPEVWCQSLKRGADCGAVGHCIATVWETENVD 338
L +V LCC+ FA P +C+ GP WC + +C A HCI TVWET+ V
Sbjct: 6 LLAVLALCCAFGVFAAATPLLGSSKCTWGPSYWCGNFSNSKECRATRHCIQTVWETQKVP 65
Query: 339 ISPNEVSVKFVRLFRQLKD-IKDLINEEYLGARISSACHDVQYPAGAKICKENTANLEQY 515
+ + + + Q +D +K EE L +C + K C + +
Sbjct: 66 VDTDSICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPE 125
Query: 516 MHHVLKSDTTAETMCRIVGMCNNKKLDNI 602
+ L S + +C + G+CN+ ++D +
Sbjct: 126 LVEALASQMNPDQVCSVAGLCNSARIDEL 154
>AF145647-1|AAD38622.1| 953|Drosophila melanogaster BcDNA.GH08312
protein.
Length = 953
Score = 75.4 bits (177), Expect = 6e-14
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Frame = +3
Query: 171 LFSVAILCCSNLSFARQVP----KECSKGPEVWCQSLKRGADCGAVGHCIATVWETENVD 338
L +V LCC+ FA P +C+ GP WC + +C A HCI TVWET+ V
Sbjct: 6 LLAVLALCCAFGVFAAATPLLGSSKCTWGPSYWCGNFSNSKECRATRHCIQTVWETQKVP 65
Query: 339 ISPNEVSVKFVRLFRQLKD-IKDLINEEYLGARISSACHDVQYPAGAKICKENTANLEQY 515
+ + + + Q +D +K EE L +C + K C + +
Sbjct: 66 VDTDSICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPE 125
Query: 516 MHHVLKSDTTAETMCRIVGMCNNKKLDNI 602
+ L S + +C + G+CN+ ++D +
Sbjct: 126 LVEALASQMNPDQVCSVAGLCNSARIDEL 154
>AE014297-4677|AAF57097.1| 953|Drosophila melanogaster CG12070-PA,
isoform A protein.
Length = 953
Score = 75.4 bits (177), Expect = 6e-14
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Frame = +3
Query: 171 LFSVAILCCSNLSFARQVP----KECSKGPEVWCQSLKRGADCGAVGHCIATVWETENVD 338
L +V LCC+ FA P +C+ GP WC + +C A HCI TVWET+ V
Sbjct: 6 LLAVLALCCAFGVFAAATPLLGSSKCTWGPSYWCGNFSNSKECRATRHCIQTVWETQKVP 65
Query: 339 ISPNEVSVKFVRLFRQLKD-IKDLINEEYLGARISSACHDVQYPAGAKICKENTANLEQY 515
+ + + + Q +D +K EE L +C + K C + +
Sbjct: 66 VDTDSICTICKDMVTQARDQLKSNQTEEELKEVFEGSCKLIPIKPIQKECIKVADDFLPE 125
Query: 516 MHHVLKSDTTAETMCRIVGMCNNKKLDNI 602
+ L S + +C + G+CN+ ++D +
Sbjct: 126 LVEALASQMNPDQVCSVAGLCNSARIDEL 154
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,800,420
Number of Sequences: 53049
Number of extensions: 654405
Number of successful extensions: 2102
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2098
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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