Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_D12
(489 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 289 1e-78
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 289 1e-78
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 289 1e-78
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 289 1e-78
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 289 1e-78
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 285 2e-77
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 224 6e-59
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 224 6e-59
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 194 5e-50
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 194 5e-50
AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-P... 59 3e-09
AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-P... 59 3e-09
BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p pro... 57 1e-08
BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p pro... 57 1e-08
AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA... 30 1.5
BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p pro... 30 2.0
AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-P... 30 2.0
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 289 bits (710), Expect = 1e-78
Identities = 130/156 (83%), Positives = 146/156 (93%)
Frame = +1
Query: 22 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 201
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 202 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 381
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 382 IPGLTDGEVPRRLGPKRASKIRKLFNIKKEDDVRRY 489
IPGLTD +PRRLGPKRASKIRKL+N+ KEDDVRR+
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRF 156
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 289 bits (710), Expect = 1e-78
Identities = 130/156 (83%), Positives = 146/156 (93%)
Frame = +1
Query: 22 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 201
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 202 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 381
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 382 IPGLTDGEVPRRLGPKRASKIRKLFNIKKEDDVRRY 489
IPGLTD +PRRLGPKRASKIRKL+N+ KEDDVRR+
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRF 156
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 289 bits (710), Expect = 1e-78
Identities = 130/156 (83%), Positives = 146/156 (93%)
Frame = +1
Query: 22 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 201
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 202 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 381
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 382 IPGLTDGEVPRRLGPKRASKIRKLFNIKKEDDVRRY 489
IPGLTD +PRRLGPKRASKIRKL+N+ KEDDVRR+
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRF 156
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 289 bits (710), Expect = 1e-78
Identities = 130/156 (83%), Positives = 146/156 (93%)
Frame = +1
Query: 22 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 201
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 202 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 381
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 382 IPGLTDGEVPRRLGPKRASKIRKLFNIKKEDDVRRY 489
IPGLTD +PRRLGPKRASKIRKL+N+ KEDDVRR+
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRF 156
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 289 bits (710), Expect = 1e-78
Identities = 130/156 (83%), Positives = 146/156 (93%)
Frame = +1
Query: 22 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 201
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 202 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 381
FPMKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKD 120
Query: 382 IPGLTDGEVPRRLGPKRASKIRKLFNIKKEDDVRRY 489
IPGLTD +PRRLGPKRASKIRKL+N+ KEDDVRR+
Sbjct: 121 IPGLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRF 156
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 285 bits (700), Expect = 2e-77
Identities = 128/154 (83%), Positives = 144/154 (93%)
Frame = +1
Query: 28 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQGFP 207
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQGFP
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFP 65
Query: 208 MKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIP 387
MKQGVLT+ RVRLL+ KGHSCYRPRR GERKRKSVRGCIVDAN+SVLALV+++KG ++IP
Sbjct: 66 MKQGVLTHGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDIP 125
Query: 388 GLTDGEVPRRLGPKRASKIRKLFNIKKEDDVRRY 489
GLTD +PRRLGPKRASKIRKL+N+ KEDDVRR+
Sbjct: 126 GLTDTTIPRRLGPKRASKIRKLYNLSKEDDVRRF 159
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 224 bits (547), Expect = 6e-59
Identities = 100/125 (80%), Positives = 115/125 (92%)
Frame = +1
Query: 115 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 294
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 295 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNIKKED 474
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+N+ KED
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKED 120
Query: 475 DVRRY 489
DVRR+
Sbjct: 121 DVRRF 125
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 224 bits (547), Expect = 6e-59
Identities = 100/125 (80%), Positives = 115/125 (92%)
Frame = +1
Query: 115 MGAEVDADLLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 294
MG V+AD+LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 295 RKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNIKKED 474
RKRKSVRGCIVDAN+SVLALV+++KG ++IPGLTD +PRRLGPKRASKIRKL+N+ KED
Sbjct: 61 RKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTDTTIPRRLGPKRASKIRKLYNLSKED 120
Query: 475 DVRRY 489
DVRR+
Sbjct: 121 DVRRF 125
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 194 bits (473), Expect = 5e-50
Identities = 97/152 (63%), Positives = 116/152 (76%)
Frame = +1
Query: 22 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 201
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 202 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 381
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS- 118
Query: 382 IPGLTDGEVPRRLGPKRASKIRKLFNIKKEDD 477
P RLGP R+S I K++ + +EDD
Sbjct: 119 ---------PCRLGPVRSSNISKIYYLCEEDD 141
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 194 bits (473), Expect = 5e-50
Identities = 97/152 (63%), Positives = 116/152 (76%)
Frame = +1
Query: 22 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRVAGGNDKQG 201
MKLNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR+AGGNDKQG
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 202 FPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 381
FPMKQGVLT+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 61 FPMKQGVLTHGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS- 118
Query: 382 IPGLTDGEVPRRLGPKRASKIRKLFNIKKEDD 477
P RLGP R+S I K++ + +EDD
Sbjct: 119 ---------PCRLGPVRSSNISKIYYLCEEDD 141
>AE014298-1077|AAS65274.1| 135|Drosophila melanogaster CG33222-PA
protein.
Length = 135
Score = 59.3 bits (137), Expect = 3e-09
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +1
Query: 229 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 408
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 409 PRRLGPKRASKIRKLFNIKKEDD 477
P RLGP R+S I K++ + +EDD
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD 76
>AE014298-1076|AAF46287.3| 135|Drosophila melanogaster CG11386-PA
protein.
Length = 135
Score = 59.3 bits (137), Expect = 3e-09
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +1
Query: 229 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 408
N R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 5 NRRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS---------- 53
Query: 409 PRRLGPKRASKIRKLFNIKKEDD 477
P RLGP R+S I K++ + +EDD
Sbjct: 54 PCRLGPVRSSNISKIYYLCEEDD 76
>BT022735-1|AAY55151.1| 149|Drosophila melanogaster IP07614p
protein.
Length = 149
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +1
Query: 235 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 414
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 21 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 69
Query: 415 RLGPKRASKIRKLFNIKKEDD 477
RLGP R+S I K++ + +EDD
Sbjct: 70 RLGPVRSSNISKIYYLCEEDD 90
>BT022511-1|AAY54927.1| 147|Drosophila melanogaster IP07914p
protein.
Length = 147
Score = 57.2 bits (132), Expect = 1e-08
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +1
Query: 235 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 414
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 415 RLGPKRASKIRKLFNIKKEDD 477
RLGP R+S I K++ + +EDD
Sbjct: 68 RLGPVRSSNISKIYYLCEEDD 88
>AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA
protein.
Length = 1399
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -3
Query: 199 PACRYRRQHGEHNLSIRRLEDLHQLQRPYAFHRRYGACAHPPLQ 68
PA +QH +H L+ R ++ + P HR GA A P+Q
Sbjct: 1035 PASNLNKQHADHYLANERKDNALDYKPPVPPHRNVGARACLPVQ 1078
>BT024291-1|ABC86353.1| 638|Drosophila melanogaster IP12935p
protein.
Length = 638
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 277 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 426
P ER R + R I+ ++ A+V+V G +E DG+ RRL P
Sbjct: 271 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 321
>AE014298-1809|AAF48200.3| 681|Drosophila melanogaster CG12717-PA
protein.
Length = 681
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 277 PRRDGERKR-KSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 426
P ER R + R I+ ++ A+V+V G +E DG+ RRL P
Sbjct: 314 PAERAERSRLRRNRNWILSRDVDEDAVVLVSSGDEETTAADDGQTERRLSP 364
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,104,572
Number of Sequences: 53049
Number of extensions: 467691
Number of successful extensions: 1156
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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