Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_D10
         (343 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   5.5  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   5.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   7.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   7.2  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    21   9.6  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    21   9.6  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 110  FLSYHDSLLEEVLIDRNTVLFWHQHLGQPTFH 15
            FL+YH++  E   +  NT+  +  H  + + H
Sbjct: 3086 FLNYHENTPEGEQVHDNTIQRYKSHYKRTSKH 3117


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 335 RTVSVRTDLFRVAGTISGG 279
           R V++  D+   +GT+SGG
Sbjct: 724 RVVTIGGDVIETSGTMSGG 742


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 307  SGLLVQFQEVSAGNLRYSY 251
            SGLL   +   AGN RY Y
Sbjct: 1888 SGLLTLKRTPDAGNTRYMY 1906


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 307  SGLLVQFQEVSAGNLRYSY 251
            SGLL   +   AGN RY Y
Sbjct: 1889 SGLLTLKRTPDAGNTRYMY 1907


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 194 RIC*GTVRMEAFYWYL 241
           R C   V+ +AFYW +
Sbjct: 476 RACRKAVKSQAFYWLI 491


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/31 (22%), Positives = 17/31 (54%)
 Frame = -1

Query: 238 IPVKCLHANCSLTYPLDLSDCIALITWRLGI 146
           IP+   ++ C+ ++PL    C+ ++   L +
Sbjct: 243 IPIGKTYSLCTNSFPLGTLLCVGIVICNLSV 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,735
Number of Sequences: 2352
Number of extensions: 6310
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24075240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)