Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_D10
(343 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10 v... 117 8e-27
U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10 pro... 117 1e-26
BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10 p... 117 1e-26
BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10 p... 117 1e-26
BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein. 117 1e-26
BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10 p... 117 1e-26
BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein. 117 1e-26
BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein. 117 1e-26
BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein. 117 1e-26
BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10 p... 117 1e-26
AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10 p... 103 1e-22
BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein. 95 7e-20
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 77 1e-14
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 77 1e-14
U07149-1|AAA16958.1| 346|Homo sapiens retinal degeneration slow... 31 0.94
M73531-1|AAA60260.1| 346|Homo sapiens retinal degeneration slow... 31 0.94
BC074720-1|AAH74720.1| 346|Homo sapiens peripherin 2 (retinal d... 31 0.94
AL049843-2|CAB75420.1| 346|Homo sapiens peripherin 2 (retinal d... 31 0.94
AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens ... 31 1.2
>AB209165-1|BAD92402.1| 174|Homo sapiens ribosomal protein S10
variant protein.
Length = 174
Score = 117 bits (282), Expect = 8e-27
Identities = 53/68 (77%), Positives = 61/68 (89%), Gaps = 2/68 (2%)
Frame = +3
Query: 33 KMLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVK 206
+MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVK
Sbjct: 9 QMLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVK 68
Query: 207 EQFAWRHF 230
EQFAWRHF
Sbjct: 69 EQFAWRHF 76
Score = 35.1 bits (77), Expect = 0.058
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +1
Query: 265 NFLHLPPEIVPATLKRSVRTETVR 336
++LHLPPEIVPA L+RS R ET R
Sbjct: 90 DYLHLPPEIVPAILRRS-RPETGR 112
>U14972-1|AAA85660.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 117 bits (281), Expect = 1e-26
Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 2/67 (2%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 209
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 210 QFAWRHF 230
QFAWRHF
Sbjct: 61 QFAWRHF 67
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 265 NFLHLPPEIVPATLKRSVRTETVR 336
++LHLPPEIVPATL+RS R ET R
Sbjct: 81 DYLHLPPEIVPATLRRS-RPETGR 103
>BX255972-3|CAH73101.1| 172|Homo sapiens ribosomal protein S10
protein.
Length = 172
Score = 117 bits (281), Expect = 1e-26
Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 2/67 (2%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 209
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 210 QFAWRHF 230
QFAWRHF
Sbjct: 61 QFAWRHF 67
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 265 NFLHLPPEIVPATLKRSVRTETVR 336
++LHLPPEIVPATL+RS R ET R
Sbjct: 81 DYLHLPPEIVPATLRRS-RPETGR 103
>BX255972-2|CAH73100.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 117 bits (281), Expect = 1e-26
Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 2/67 (2%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 209
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 210 QFAWRHF 230
QFAWRHF
Sbjct: 61 QFAWRHF 67
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 265 NFLHLPPEIVPATLKRSVRTETVR 336
++LHLPPEIVPATL+RS R ET R
Sbjct: 81 DYLHLPPEIVPATLRRS-RPETGR 103
>BC073799-1|AAH73799.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 117 bits (281), Expect = 1e-26
Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 2/67 (2%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 209
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 210 QFAWRHF 230
QFAWRHF
Sbjct: 61 QFAWRHF 67
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 265 NFLHLPPEIVPATLKRSVRTETVR 336
++LHLPPEIVPATL+RS R ET R
Sbjct: 81 DYLHLPPEIVPATLRRS-RPETGR 103
>BC071946-1|AAH71946.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 117 bits (281), Expect = 1e-26
Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 2/67 (2%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 209
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 210 QFAWRHF 230
QFAWRHF
Sbjct: 61 QFAWRHF 67
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 265 NFLHLPPEIVPATLKRSVRTETVR 336
++LHLPPEIVPATL+RS R ET R
Sbjct: 81 DYLHLPPEIVPATLRRS-RPETGR 103
>BC070235-1|AAH70235.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 117 bits (281), Expect = 1e-26
Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 2/67 (2%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 209
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 210 QFAWRHF 230
QFAWRHF
Sbjct: 61 QFAWRHF 67
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 265 NFLHLPPEIVPATLKRSVRTETVR 336
++LHLPPEIVPATL+RS R ET R
Sbjct: 81 DYLHLPPEIVPATLRRS-RPETGR 103
>BC005012-1|AAH05012.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 117 bits (281), Expect = 1e-26
Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 2/67 (2%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 209
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 210 QFAWRHF 230
QFAWRHF
Sbjct: 61 QFAWRHF 67
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 265 NFLHLPPEIVPATLKRSVRTETVR 336
++LHLPPEIVPATL+RS R ET R
Sbjct: 81 DYLHLPPEIVPATLRRS-RPETGR 103
>BC001955-1|AAH01955.1| 165|Homo sapiens RPS10 protein protein.
Length = 165
Score = 117 bits (281), Expect = 1e-26
Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 2/67 (2%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 209
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 210 QFAWRHF 230
QFAWRHF
Sbjct: 61 QFAWRHF 67
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 265 NFLHLPPEIVPATLKRSVRTETVR 336
++LHLPPEIVPATL+RS R ET R
Sbjct: 81 DYLHLPPEIVPATLRRS-RPETGR 103
>BC001032-1|AAH01032.1| 165|Homo sapiens ribosomal protein S10
protein.
Length = 165
Score = 117 bits (281), Expect = 1e-26
Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 2/67 (2%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 209
MLMPK+NR++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKE 60
Query: 210 QFAWRHF 230
QFAWRHF
Sbjct: 61 QFAWRHF 67
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1
Query: 265 NFLHLPPEIVPATLKRSVRTETVR 336
++LHLPPEIVPATL+RS R ET R
Sbjct: 81 DYLHLPPEIVPATLRRS-RPETGR 103
>AB007151-1|BAA25817.1| 78|Homo sapiens ribosomal protein S10
protein.
Length = 78
Score = 103 bits (248), Expect = 1e-22
Identities = 47/60 (78%), Positives = 53/60 (88%), Gaps = 2/60 (3%)
Frame = +3
Query: 57 RVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKEQFAWRHF 230
R++IYE LFKEGVMVAKKD H PKHP+L + +PNL V+KAMQSLKSRGYVKEQFAWRHF
Sbjct: 1 RIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHF 60
>BC030568-1|AAH30568.1| 72|Homo sapiens LOC376693 protein protein.
Length = 72
Score = 94.7 bits (225), Expect = 7e-20
Identities = 45/60 (75%), Positives = 52/60 (86%), Gaps = 2/60 (3%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDL--EKIPNLQVIKAMQSLKSRGYVKE 209
MLMPK+N ++IYE LFKEGVMVAKKD H PKHP+L + PNL+V+KAMQSLKSRGYVKE
Sbjct: 1 MLMPKKNWIAIYELLFKEGVMVAKKDVHMPKHPELADKNAPNLRVMKAMQSLKSRGYVKE 60
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 77.0 bits (181), Expect = 1e-14
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPK-HPDLEKIPNLQVIKAMQSLKSRGYVKEQ 212
MLMP+ +IYE LF+EGVMVAKKD HP + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 213 FAWRHF 230
FAW HF
Sbjct: 65 FAWCHF 70
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +1
Query: 268 FLHLPPEIVPATLKR 312
+LHLPPEIV A+L+R
Sbjct: 85 YLHLPPEIVAASLQR 99
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 77.0 bits (181), Expect = 1e-14
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPK-HPDLEKIPNLQVIKAMQSLKSRGYVKEQ 212
MLMP+ +IYE LF+EGVMVAKKD HP + + NLQV++AM SL++RG V+E
Sbjct: 5 MLMPRDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMASLRARGLVRET 64
Query: 213 FAWRHF 230
FAW HF
Sbjct: 65 FAWCHF 70
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +1
Query: 268 FLHLPPEIVPATLKR 312
+LHLPPEIVPA+L+R
Sbjct: 85 YLHLPPEIVPASLQR 99
>U07149-1|AAA16958.1| 346|Homo sapiens retinal degeneration slow
protein protein.
Length = 346
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 176 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFW 45
+S+DH + L +W+ GC LSY+ SL+ + + T+L W
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLMNSMGV--VTLLIW 273
>M73531-1|AAA60260.1| 346|Homo sapiens retinal degeneration slow
protein protein.
Length = 346
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 176 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFW 45
+S+DH + L +W+ GC LSY+ SL+ + + T+L W
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLMNSMGV--VTLLIW 273
>BC074720-1|AAH74720.1| 346|Homo sapiens peripherin 2 (retinal
degeneration, slow) protein.
Length = 346
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 176 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFW 45
+S+DH + L +W+ GC LSY+ SL+ + + T+L W
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLMNSMGV--VTLLIW 273
>AL049843-2|CAB75420.1| 346|Homo sapiens peripherin 2 (retinal
degeneration, slow) protein.
Length = 346
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -3
Query: 176 HSFDHLEVRDLLEIWMFGCMVVFLSYHDSLLEEVLIDRNTVLFW 45
+S+DH + L +W+ GC LSY+ SL+ + + T+L W
Sbjct: 234 YSYDHQT--EELNLWVRGCRAALLSYYSSLMNSMGV--VTLLIW 273
>AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens
cDNA FLJ44846 fis, clone BRACE3051144. ).
Length = 195
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 127 LGAW*SFLATMTPSLKRYS 71
LG W FLAT+TPSLKR S
Sbjct: 177 LGRWTFFLATVTPSLKRSS 195
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,995,228
Number of Sequences: 237096
Number of extensions: 957120
Number of successful extensions: 1689
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1675
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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