Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_D10
(343 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p pro... 116 6e-27
AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-P... 116 6e-27
AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-P... 116 6e-27
AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-P... 110 5e-25
AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p pro... 108 2e-24
DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 2.8
DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 2.8
DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 2.8
DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 2.8
DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 2.8
DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 2.8
DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 2.8
DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 prot... 28 2.8
BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p pro... 28 2.8
AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA... 28 2.8
AB073024-1|BAB69959.1| 1722|Drosophila melanogaster double-stran... 28 2.8
BT010061-1|AAQ22530.1| 597|Drosophila melanogaster LD15332p pro... 27 8.4
AE014296-1464|AAF50410.2| 597|Drosophila melanogaster CG6694-PA... 27 8.4
>AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p
protein.
Length = 160
Score = 116 bits (280), Expect = 6e-27
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 215
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 216 AWRHF 230
AWRH+
Sbjct: 61 AWRHY 65
Score = 43.6 bits (98), Expect = 7e-05
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +1
Query: 265 NFLHLPPEIVPATLKRSVRTETVR 336
++LHLPPEIVP+TLKR R+ETVR
Sbjct: 79 SYLHLPPEIVPSTLKRPARSETVR 102
>AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-PC,
isoform C protein.
Length = 160
Score = 116 bits (280), Expect = 6e-27
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 215
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 216 AWRHF 230
AWRH+
Sbjct: 61 AWRHY 65
Score = 43.6 bits (98), Expect = 7e-05
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +1
Query: 265 NFLHLPPEIVPATLKRSVRTETVR 336
++LHLPPEIVP+TLKR R+ETVR
Sbjct: 79 SYLHLPPEIVPSTLKRPARSETVR 102
>AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-PB,
isoform B protein.
Length = 160
Score = 116 bits (280), Expect = 6e-27
Identities = 52/65 (80%), Positives = 58/65 (89%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 215
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 216 AWRHF 230
AWRH+
Sbjct: 61 AWRHY 65
Score = 43.6 bits (98), Expect = 7e-05
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +1
Query: 265 NFLHLPPEIVPATLKRSVRTETVR 336
++LHLPPEIVP+TLKR R+ETVR
Sbjct: 79 SYLHLPPEIVPSTLKRPARSETVR 102
>AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-PA
protein.
Length = 163
Score = 110 bits (264), Expect = 5e-25
Identities = 50/65 (76%), Positives = 56/65 (86%)
Frame = +3
Query: 36 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 215
M +PK NRV+IYEYLFKEGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQF
Sbjct: 1 MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQF 60
Query: 216 AWRHF 230
AWRHF
Sbjct: 61 AWRHF 65
Score = 35.9 bits (79), Expect = 0.014
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 268 FLHLPPEIVPATLKRSVRTETVR 336
+LHLPPEIVP+TL ++ R+ VR
Sbjct: 80 YLHLPPEIVPSTLTQTTRSNAVR 102
>AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p
protein.
Length = 162
Score = 108 bits (259), Expect = 2e-24
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = +3
Query: 42 MPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAW 221
+PK NRV+IYEYLFKEGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQFAW
Sbjct: 2 IPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAW 61
Query: 222 RHF 230
RHF
Sbjct: 62 RHF 64
Score = 35.9 bits (79), Expect = 0.014
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +1
Query: 268 FLHLPPEIVPATLKRSVRTETVR 336
+LHLPPEIVP+TL ++ R+ VR
Sbjct: 79 YLHLPPEIVPSTLTQTTRSNAVR 101
>DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 221 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 132
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 221 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 132
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 221 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 132
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 221 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 132
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 221 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 132
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 221 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 132
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 221 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 132
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 221 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 132
P E+ + S + + LH F + RD+L+IW
Sbjct: 778 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p
protein.
Length = 1640
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 221 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 132
P E+ + S + + LH F + RD+L+IW
Sbjct: 764 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 793
>AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA
protein.
Length = 1722
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 221 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 132
P E+ + S + + LH F + RD+L+IW
Sbjct: 785 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 814
>AB073024-1|BAB69959.1| 1722|Drosophila melanogaster
double-strand-specific ribonucleaseprotein.
Length = 1722
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 221 PCELFLNISSRFK*LHSFDHLEVRDLLEIW 132
P E+ + S + + LH F + RD+L+IW
Sbjct: 785 PLEVIIQNSEQLELLHQFHGMVFRDILKIW 814
>BT010061-1|AAQ22530.1| 597|Drosophila melanogaster LD15332p
protein.
Length = 597
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 281 GKCRKFKVFIPHLLNTSKMPPCELFL 204
G+C K K + H + KMP C +L
Sbjct: 409 GECTKPKCLLSHNVTLEKMPVCRYYL 434
>AE014296-1464|AAF50410.2| 597|Drosophila melanogaster CG6694-PA
protein.
Length = 597
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 281 GKCRKFKVFIPHLLNTSKMPPCELFL 204
G+C K K + H + KMP C +L
Sbjct: 409 GECTKPKCLLSHNVTLEKMPVCRYYL 434
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,403,229
Number of Sequences: 53049
Number of extensions: 283779
Number of successful extensions: 552
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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