Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_D09
(358 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8IDJ5 Cluster: Putative uncharacterized protein PF13_0... 40 0.010
UniRef50_Q8IAV1 Cluster: Putative uncharacterized protein PF08_0... 38 0.039
UniRef50_Q7RFI0 Cluster: Putative uncharacterized protein PY0472... 35 0.48
UniRef50_Q6ZSA2 Cluster: CDNA FLJ45698 fis, clone FEBRA2017811; ... 34 0.63
UniRef50_A2DXN9 Cluster: Putative uncharacterized protein; n=1; ... 34 0.83
UniRef50_P48903 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 1.5
UniRef50_Q4TFH7 Cluster: Chromosome undetermined SCAF4471, whole... 32 2.5
UniRef50_UPI0000DC20C5 Cluster: UPI0000DC20C5 related cluster; n... 31 4.4
UniRef50_UPI0000DC0CD1 Cluster: UPI0000DC0CD1 related cluster; n... 31 5.9
UniRef50_Q4YR37 Cluster: Putative uncharacterized protein; n=1; ... 31 5.9
UniRef50_Q4N9I8 Cluster: DNA-directed RNA polymerase, alpha subu... 31 5.9
UniRef50_UPI0000DC12B3 Cluster: similar to vomeronasal 2, recept... 31 7.7
UniRef50_UPI000065EC5E Cluster: Homolog of Homo sapiens "Splice ... 31 7.7
UniRef50_UPI000061855A Cluster: UPI000061855A related cluster; n... 31 7.7
UniRef50_A4XGL7 Cluster: Transposase, IS605 OrfB family; n=4; Ba... 31 7.7
UniRef50_Q22DS2 Cluster: Putative uncharacterized protein; n=1; ... 31 7.7
>UniRef50_Q8IDJ5 Cluster: Putative uncharacterized protein
PF13_0264; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF13_0264 - Plasmodium
falciparum (isolate 3D7)
Length = 709
Score = 40.3 bits (90), Expect = 0.010
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = -3
Query: 182 CPHEYSYTHTYANYCHFNSEMYTFAQYHFVTDTILTLPSL-KYVTNNKYADF 30
C E+++ + + N+ H N+ Y+F YH+++ ++L +P + +YVT Y F
Sbjct: 171 CIKEHNHFYIHNNHNHNNNNNYSFLFYHYISLSLLNIPEINEYVTKLDYTSF 222
>UniRef50_Q8IAV1 Cluster: Putative uncharacterized protein PF08_0091;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF08_0091 - Plasmodium falciparum
(isolate 3D7)
Length = 1210
Score = 38.3 bits (85), Expect = 0.039
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -3
Query: 149 ANYCHFNSEMYTFAQYHFVTDTILTLPSLKYVTNNKY 39
A YC++N +Y + H+++ I T+P LKY KY
Sbjct: 915 AKYCNYNQRLYFNIKKHYISRDIFTVPKLKYCEKPKY 951
>UniRef50_Q7RFI0 Cluster: Putative uncharacterized protein PY04726;
n=3; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY04726 - Plasmodium yoelii yoelii
Length = 572
Score = 34.7 bits (76), Expect = 0.48
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 217 SNSSLKRNKITRAHMNIHTRTHTLIIVILIVKCTLSRSTISSPTLY*HY 71
+N RNK AH NIH T+ + + IL++ +S+ I+ LY ++
Sbjct: 160 TNQLKDRNKHKNAHTNIHITTNYIFVYILLILLGISQYNITEYVLYFYF 208
>UniRef50_Q6ZSA2 Cluster: CDNA FLJ45698 fis, clone FEBRA2017811;
n=3; Homo sapiens|Rep: CDNA FLJ45698 fis, clone
FEBRA2017811 - Homo sapiens (Human)
Length = 415
Score = 34.3 bits (75), Expect = 0.63
Identities = 22/96 (22%), Positives = 46/96 (47%)
Frame = -3
Query: 344 HYDMQLYVFFVINL*FNNYTHQ*TNLH*VCPH*LSTICYLLIIKFIFKT*QNHSCPHEYS 165
H M ++ + ++ + Y H T++H C H + + ++ H+ H ++
Sbjct: 254 HIHMHIHTYTHMHTHMDTYPH--THIH-TCTH-MHSHAHINTHTHAHIHMHMHTHTHTHT 309
Query: 164 YTHTYANYCHFNSEMYTFAQYHFVTDTILTLPSLKY 57
YTH +A + H N+ M+T+ H T T + + +L +
Sbjct: 310 YTHAHA-HIHINTYMHTYTYTHIRTYTHIQMHTLTW 344
>UniRef50_A2DXN9 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 925
Score = 33.9 bits (74), Expect = 0.83
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 164 YTHTYANYCHFNSEMYTFAQYHFVTDTILTLPSLKYVTNNKYADF 30
Y+ A Y F EMYTFA ++++ I +P + Y +K ++
Sbjct: 826 YSICCAPYPEFEKEMYTFADMYYISGDISKIPKVSYTIFSKAREY 870
>UniRef50_P48903 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=1; Chondrus crispus|Rep: NADH-ubiquinone
oxidoreductase chain 2 - Chondrus crispus (Carragheen)
Length = 497
Score = 33.1 bits (72), Expect = 1.5
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -2
Query: 354 IFITL*HAVICFFCYKFII*QLYSSVNEFTLSLPTLVINHLLL 226
IF+ L + CF+ K I +SS+NE+ + P +N LLL
Sbjct: 425 IFVVLMSCISCFYYIKLIKSMYFSSINEWKVLYPINKLNSLLL 467
>UniRef50_Q4TFH7 Cluster: Chromosome undetermined SCAF4471, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF4471,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1260
Score = 32.3 bits (70), Expect = 2.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 193 KITRAHMNIHTRTHTLIIVILIVKCTLSRSTISSPTL 83
++T H + HT HT I+ +++V C + S +P L
Sbjct: 803 EVTHTHTHTHTHAHTQIVAVVVVACLHASSLQFNPGL 839
>UniRef50_UPI0000DC20C5 Cluster: UPI0000DC20C5 related cluster; n=3;
Rattus norvegicus|Rep: UPI0000DC20C5 UniRef100 entry -
Rattus norvegicus
Length = 311
Score = 31.5 bits (68), Expect = 4.4
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = -3
Query: 287 THQ*TNLH*VCPH*LSTICYLLIIKFIFKT*QNHSCPHEYSYTHTYANYCHFNSEMYTFA 108
TH T++H + T ++ I I +H+ H ++YTHT A Y H + ++ +
Sbjct: 72 THTYTHMHTYLNTHIYTPAHIHIAACIQTHTYSHT--HTFTYTHTPAQYTHVHIHLHIYT 129
Query: 107 QYH 99
+H
Sbjct: 130 HHH 132
>UniRef50_UPI0000DC0CD1 Cluster: UPI0000DC0CD1 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0CD1 UniRef100 entry -
Rattus norvegicus
Length = 270
Score = 31.1 bits (67), Expect = 5.9
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 194 QNHSCPHEYSYTHTYANYCHFNSEMYTFAQYHFVTDT 84
Q H C HE ++THT+ + H +++ T Q H T T
Sbjct: 146 QMHMCRHECTHTHTH-THTHTHTDTDTHKQIHTHTQT 181
>UniRef50_Q4YR37 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 266
Score = 31.1 bits (67), Expect = 5.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 191 NHSCPHEYSYTHTYANYCHFNSEMYTFAQYH 99
NH H Y Y H Y ++C +N F +Y+
Sbjct: 42 NHWYVHFYEYNHWYVHFCEYNHWYVHFYEYN 72
>UniRef50_Q4N9I8 Cluster: DNA-directed RNA polymerase, alpha
subunit, putative; n=1; Theileria parva|Rep:
DNA-directed RNA polymerase, alpha subunit, putative -
Theileria parva
Length = 746
Score = 31.1 bits (67), Expect = 5.9
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -3
Query: 167 SYTHTYANYCHF-NSEMYTFAQYHFVTDTIL 78
SYTH Y Y HF + +YTF H T T L
Sbjct: 349 SYTHFYTIYTHFTHLHIYTFTHLHIYTFTHL 379
>UniRef50_UPI0000DC12B3 Cluster: similar to vomeronasal 2, receptor,
1 (LOC364089), mRNA; n=7; Rattus norvegicus|Rep: similar
to vomeronasal 2, receptor, 1 (LOC364089), mRNA - Rattus
norvegicus
Length = 803
Score = 30.7 bits (66), Expect = 7.7
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -1
Query: 214 NSSLKRNKITRAHMNIHTRTHT 149
NS + N TRAH ++HT THT
Sbjct: 340 NSYIHTNTHTRAHTHVHTHTHT 361
>UniRef50_UPI000065EC5E Cluster: Homolog of Homo sapiens "Splice
Isoform 1 of Neurexin 2-alpha precursor; n=1; Takifugu
rubripes|Rep: Homolog of Homo sapiens "Splice Isoform 1
of Neurexin 2-alpha precursor - Takifugu rubripes
Length = 906
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 321 FFCYKFII*QLYSSVNEFTLSLPTLVINHLLL 226
FFCY + + SS +E TLS TL N L+L
Sbjct: 13 FFCYDLSLTPIQSSTDEITLSFRTLQRNGLML 44
>UniRef50_UPI000061855A Cluster: UPI000061855A related cluster; n=1;
Bos taurus|Rep: UPI000061855A UniRef100 entry - Bos
Taurus
Length = 433
Score = 30.7 bits (66), Expect = 7.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 188 HSCPHEYSYTHTYANYCHFNSEMYTFAQYH 99
HSC H +++THT+A + H S ++ H
Sbjct: 277 HSCTHSHAFTHTHA-HTHMRSHIHRCTHSH 305
>UniRef50_A4XGL7 Cluster: Transposase, IS605 OrfB family; n=4;
Bacteria|Rep: Transposase, IS605 OrfB family -
Caldicellulosiruptor saccharolyticus (strain ATCC 43494
/ DSM 8903)
Length = 405
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -3
Query: 209 IFKT*QNHSCPHEYSYTHTYANYCHFNSEMYTFAQYHFVTDTILTLPSLKY 57
++KT +NH + +Y CHF+ +Y +A YH T L+Y
Sbjct: 1 MYKTQKNHIRCDKQTY-RLLRQLCHFSKNLYNYALYHIRQHYFKTQEYLRY 50
>UniRef50_Q22DS2 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 595
Score = 30.7 bits (66), Expect = 7.7
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -3
Query: 164 YTHTYANYCHFNSEMYTFA-QYHFVTDTILTLPSLKYVT 51
Y ++N + N+E+Y F Q F++DTI+T + KY+T
Sbjct: 183 YDVEFSNSTNKNNEIYQFQNQTSFLSDTIITKNNTKYLT 221
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,486,200
Number of Sequences: 1657284
Number of extensions: 5392718
Number of successful extensions: 11275
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11119
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11941480628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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