Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_D08
(203 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S... 95 4e-20
CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein. 95 4e-20
BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23 p... 95 4e-20
X72012-1|CAA50891.1| 625|Homo sapiens endoglin protein. 30 1.6
DQ866809-1|ABI75346.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 1.6
AL162586-6|CAI39765.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 1.6
AL157935-2|CAI12605.1| 625|Homo sapiens endoglin (Osler-Rendu-W... 30 1.6
EF186024-1|ABM60755.1| 1135|Homo sapiens WTX protein. 28 6.3
BC131633-1|AAI31634.1| 730|Homo sapiens WDR27 protein protein. 28 6.3
AL731571-3|CAI16102.1| 985|Homo sapiens C-terminal binding prot... 28 6.3
AL355852-3|CAI40637.1| 804|Homo sapiens family with sequence si... 28 6.3
AL355852-2|CAO03539.1| 1135|Homo sapiens family with sequence si... 28 6.3
AK097146-1|BAC04964.1| 804|Homo sapiens protein ( Homo sapiens ... 28 6.3
AF222711-1|AAG45951.1| 985|Homo sapiens ribeye protein. 28 6.3
U28164-1|AAD28324.1| 520|Homo sapiens spermatogenesis associate... 27 8.4
BC009481-1|AAH09481.1| 520|Homo sapiens spermatogenesis associa... 27 8.4
AL031685-1|CAB46029.1| 520|Homo sapiens spermatogenesis associa... 27 8.4
AB018300-1|BAA34477.2| 534|Homo sapiens KIAA0757 protein protein. 27 8.4
>D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S28
homologue protein.
Length = 143
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +3
Query: 39 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKV 203
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKV
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKV 55
>CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein.
Length = 143
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +3
Query: 39 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKV 203
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKV
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKV 55
>BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23
protein.
Length = 143
Score = 95.1 bits (226), Expect = 4e-20
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = +3
Query: 39 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTRWKANPFGGASHAKGIVLEKV 203
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKV
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKV 55
>X72012-1|CAA50891.1| 625|Homo sapiens endoglin protein.
Length = 625
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 170 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 48
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>DQ866809-1|ABI75346.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 170 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 48
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AL162586-6|CAI39765.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 170 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 48
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>AL157935-2|CAI12605.1| 625|Homo sapiens endoglin
(Osler-Rendu-Weber syndrome 1) protein.
Length = 625
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 170 CTTEGVRLPSRTHVGFFEFLVGPSLLATMIHVLARRANTPR 48
CT++G+ LP+ + F FL+G L A + ++ + PR
Sbjct: 582 CTSKGLVLPAVLGITFGAFLIGALLTAALWYIYSHTREYPR 622
>EF186024-1|ABM60755.1| 1135|Homo sapiens WTX protein.
Length = 1135
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 56 YSHGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLR 163
++ A ARE+ +R A GR+ + H +E G R
Sbjct: 589 HAREAHAREAYTREAYGREAYAREAHTWEAHGREAR 624
>BC131633-1|AAI31634.1| 730|Homo sapiens WDR27 protein protein.
Length = 730
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -3
Query: 165 HRRGSPSISYPCGLF*IPCRPIAARDDDSR 76
H G P+ YPCG+ PC AA + R
Sbjct: 651 HFEGHPTRGYPCGIAFSPCGRFAACGAEDR 680
>AL731571-3|CAI16102.1| 985|Homo sapiens C-terminal binding protein
2 protein.
Length = 985
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 77 VLARRANTPRFTHYDSANTIASCR 6
V AR+ +TP FT YDS + S R
Sbjct: 79 VAARKGSTPDFTFYDSRQAVMSGR 102
>AL355852-3|CAI40637.1| 804|Homo sapiens family with sequence
similarity 123B protein.
Length = 804
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 56 YSHGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLR 163
++ A ARE+ +R A GR+ + H +E G R
Sbjct: 589 HAREAHAREAYTREAYGREAYAREAHTWEAHGREAR 624
>AL355852-2|CAO03539.1| 1135|Homo sapiens family with sequence
similarity 123B protein.
Length = 1135
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 56 YSHGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLR 163
++ A ARE+ +R A GR+ + H +E G R
Sbjct: 589 HAREAHAREAYTREAYGREAYAREAHTWEAHGREAR 624
>AK097146-1|BAC04964.1| 804|Homo sapiens protein ( Homo sapiens
cDNA FLJ39827 fis, clone SPLEN2012619. ).
Length = 804
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 56 YSHGAQARESSSRAAMGRQGIQKSPHGYEMEGEPLR 163
++ A ARE+ +R A GR+ + H +E G R
Sbjct: 589 HAREAHAREAYTREAYGREAYAREAHTWEAHGREAR 624
>AF222711-1|AAG45951.1| 985|Homo sapiens ribeye protein.
Length = 985
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 77 VLARRANTPRFTHYDSANTIASCR 6
V AR+ +TP FT YDS + S R
Sbjct: 79 VAARKGSTPDFTFYDSRQAVMSGR 102
>U28164-1|AAD28324.1| 520|Homo sapiens spermatogenesis associated
PD1 protein.
Length = 520
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Frame = -3
Query: 177 HEMHHRRGSP---SISYPCGLF*IPCRP-IAARDDDSRACAPCEYPEVYPLR*REHDRL 13
H ++H+R P S C + C + R D C P P +P + HD L
Sbjct: 365 HSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPSKASTHDSL 423
>BC009481-1|AAH09481.1| 520|Homo sapiens spermatogenesis associated
2 protein.
Length = 520
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Frame = -3
Query: 177 HEMHHRRGSP---SISYPCGLF*IPCRP-IAARDDDSRACAPCEYPEVYPLR*REHDRL 13
H ++H+R P S C + C + R D C P P +P + HD L
Sbjct: 365 HSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPSKASTHDSL 423
>AL031685-1|CAB46029.1| 520|Homo sapiens spermatogenesis associated
2 protein.
Length = 520
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Frame = -3
Query: 177 HEMHHRRGSP---SISYPCGLF*IPCRP-IAARDDDSRACAPCEYPEVYPLR*REHDRL 13
H ++H+R P S C + C + R D C P P +P + HD L
Sbjct: 365 HSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPSKASTHDSL 423
>AB018300-1|BAA34477.2| 534|Homo sapiens KIAA0757 protein protein.
Length = 534
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Frame = -3
Query: 177 HEMHHRRGSP---SISYPCGLF*IPCRP-IAARDDDSRACAPCEYPEVYPLR*REHDRL 13
H ++H+R P S C + C + R D C P P +P + HD L
Sbjct: 379 HSLYHKRSPPAKESALSKCQSCGLSCSSSLCQRCDSLLTCPPASKPSAFPSKASTHDSL 437
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,664,030
Number of Sequences: 237096
Number of extensions: 655870
Number of successful extensions: 2227
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2211
length of database: 76,859,062
effective HSP length: 46
effective length of database: 65,952,646
effective search space used: 1385005566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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