Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_D07
(337 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 69 6e-13
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 69 6e-13
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 68 2e-12
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 68 2e-12
AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein. 28 1.9
AF016660-3|AAN84803.1| 376|Caenorhabditis elegans Hypothetical ... 28 1.9
AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical ... 28 1.9
AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical ... 28 1.9
X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein. 27 4.4
U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of l... 27 4.4
U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of l... 27 4.4
U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of l... 27 4.4
AL031630-18|CAA21002.1| 278|Caenorhabditis elegans Hypothetical... 26 5.8
AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacti... 26 7.7
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 69.3 bits (162), Expect = 6e-13
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +3
Query: 144 EELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEE 254
EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEE
Sbjct: 6 EELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEE 42
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 286 NVVGARRSSWRVISSIE 336
NVVGARRSSWRVISSIE
Sbjct: 52 NVVGARRSSWRVISSIE 68
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 69.3 bits (162), Expect = 6e-13
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +3
Query: 144 EELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEE 254
EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSNEE
Sbjct: 6 EELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSNEE 42
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 286 NVVGARRSSWRVISSIE 336
NVVGARRSSWRVISSIE
Sbjct: 52 NVVGARRSSWRVISSIE 68
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 67.7 bits (158), Expect = 2e-12
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 141 REELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEE 254
+EELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEE
Sbjct: 5 KEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEE 42
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 286 NVVGARRSSWRVISSIE 336
NVVGARRSSWRVISSIE
Sbjct: 52 NVVGARRSSWRVISSIE 68
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 67.7 bits (158), Expect = 2e-12
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +3
Query: 141 REELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEE 254
+EELV RAKLAEQAERYDDMAA+MK+VTE G ELSNEE
Sbjct: 5 KEELVNRAKLAEQAERYDDMAASMKKVTELGAELSNEE 42
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 286 NVVGARRSSWRVISSIE 336
NVVGARRSSWRVISSIE
Sbjct: 52 NVVGARRSSWRVISSIE 68
>AF408761-1|AAO27840.1| 741|Caenorhabditis elegans Rap1GAP protein.
Length = 741
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 223 VTSFIAAAMSSYRSACSANLARCTSSSLIDG 131
+T I A ++Y+S+ A LA T SSL+DG
Sbjct: 467 LTKLINAENAAYKSSKFAKLAERTRSSLLDG 497
>AF016660-3|AAN84803.1| 376|Caenorhabditis elegans Hypothetical
protein F53A10.2b protein.
Length = 376
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 223 VTSFIAAAMSSYRSACSANLARCTSSSLIDG 131
+T I A ++Y+S+ A LA T SSL+DG
Sbjct: 102 LTKLINAENAAYKSSKFAKLAERTRSSLLDG 132
>AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical
protein F53A10.2c protein.
Length = 811
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 223 VTSFIAAAMSSYRSACSANLARCTSSSLIDG 131
+T I A ++Y+S+ A LA T SSL+DG
Sbjct: 537 LTKLINAENAAYKSSKFAKLAERTRSSLLDG 567
>AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical
protein F53A10.2a protein.
Length = 742
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 223 VTSFIAAAMSSYRSACSANLARCTSSSLIDG 131
+T I A ++Y+S+ A LA T SSL+DG
Sbjct: 468 LTKLINAENAAYKSSKFAKLAERTRSSLLDG 498
>X89223-1|CAA61507.1| 582|Caenorhabditis elegans sli-1 protein.
Length = 582
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 66 LITVYPSNNGISEINIFHRPRCPSIREELVQRAKLAEQAERYDDMAAAMKEVTETGVELS 245
L+ ++ NN I + N + + S+ + + KL + + Y+D + +++T+ + S
Sbjct: 108 LMLIFTQNNDILQDNDYLKIFLESMINKCKEIIKLFKTSAIYNDQSEERRKLTKMSLTFS 167
Query: 246 NE--ESKAFFP 272
+ E KA FP
Sbjct: 168 HMLFEIKALFP 178
>U58730-5|AAK84546.1| 582|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform a protein.
Length = 582
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 66 LITVYPSNNGISEINIFHRPRCPSIREELVQRAKLAEQAERYDDMAAAMKEVTETGVELS 245
L+ ++ NN I + N + + S+ + + KL + + Y+D + +++T+ + S
Sbjct: 108 LMLIFTQNNDILQDNDYLKIFLESMINKCKEIIKLFKTSAIYNDQSEERRKLTKMSLTFS 167
Query: 246 NE--ESKAFFP 272
+ E KA FP
Sbjct: 168 HMLFEIKALFP 178
>U58730-4|AAK84547.1| 565|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform b protein.
Length = 565
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 66 LITVYPSNNGISEINIFHRPRCPSIREELVQRAKLAEQAERYDDMAAAMKEVTETGVELS 245
L+ ++ NN I + N + + S+ + + KL + + Y+D + +++T+ + S
Sbjct: 91 LMLIFTQNNDILQDNDYLKIFLESMINKCKEIIKLFKTSAIYNDQSEERRKLTKMSLTFS 150
Query: 246 NE--ESKAFFP 272
+ E KA FP
Sbjct: 151 HMLFEIKALFP 161
>U58730-3|AAT92069.1| 523|Caenorhabditis elegans Suppressor of
lineage defect protein1, isoform c protein.
Length = 523
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/71 (23%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 66 LITVYPSNNGISEINIFHRPRCPSIREELVQRAKLAEQAERYDDMAAAMKEVTETGVELS 245
L+ ++ NN I + N + + S+ + + KL + + Y+D + +++T+ + S
Sbjct: 91 LMLIFTQNNDILQDNDYLKIFLESMINKCKEIIKLFKTSAIYNDQSEERRKLTKMSLTFS 150
Query: 246 NE--ESKAFFP 272
+ E KA FP
Sbjct: 151 HMLFEIKALFP 161
>AL031630-18|CAA21002.1| 278|Caenorhabditis elegans Hypothetical
protein Y38H6C.21 protein.
Length = 278
Score = 26.2 bits (55), Expect = 5.8
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Frame = -3
Query: 305 RRAPTTLFIRQRKEGFAF---FVAELD---AGFRHFLHRGRHVIISFSLLSQLGALY*FL 144
RR P+T F + + F ++A+L A F F+ H+ ISF++ + L L F+
Sbjct: 182 RRLPSTYFSSKIHLLYQFVPIYIAQLVYLFADFLDFITENMHISISFNISAVLAVLPHFI 241
Query: 143 P 141
P
Sbjct: 242 P 242
>AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacting
protein (scaffoldprotein) protein 1 protein.
Length = 998
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 209 DEGSDGNRRRAQQRRKQS 262
++G +GNRRR QQR+ S
Sbjct: 740 EDGINGNRRRRQQRKYDS 757
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,587,934
Number of Sequences: 27780
Number of extensions: 129862
Number of successful extensions: 373
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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