Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_D06
         (388 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015279-1|AAT94508.1| 1238|Drosophila melanogaster LD12816p pro...    28   4.9  
AE013599-2609|AAF57755.1| 1238|Drosophila melanogaster CG5098-PA...    28   4.9  
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P...    27   6.4  

>BT015279-1|AAT94508.1| 1238|Drosophila melanogaster LD12816p protein.
          Length = 1238

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 108  VNTIQTTILSPISSEINKTSFPLPPPV-NIHRIP 10
            V  I+T  ++P+   +     P PPP  NIH +P
Sbjct: 1205 VEPIKTESIAPVEVSVATPPAPAPPPAFNIHSLP 1238


>AE013599-2609|AAF57755.1| 1238|Drosophila melanogaster CG5098-PA
            protein.
          Length = 1238

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = -2

Query: 108  VNTIQTTILSPISSEINKTSFPLPPPV-NIHRIP 10
            V  I+T  ++P+   +     P PPP  NIH +P
Sbjct: 1205 VEPIKTESIAPVEVSVATPPAPAPPPAFNIHSLP 1238


>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
            protein.
          Length = 4899

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 116  FIVSMDANRSSAHVMVNGYRRLLLQHCIDGPINLLILKYYVLKKM 250
            FIVS D    +     NG   L + H +  P  L +L+ YV+KK+
Sbjct: 3032 FIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKV 3076


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,495,592
Number of Sequences: 53049
Number of extensions: 340640
Number of successful extensions: 673
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)