Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_D06
         (388 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   2.8  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   2.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   4.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   4.9  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   4.9  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   4.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   4.9  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          21   4.9  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   6.5  

>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -2

Query: 93  TTILSPISSEINKTSFPLPPP 31
           +TILSP+  +++ +S P+ PP
Sbjct: 804 STILSPVREKLS-SSQPMQPP 823


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 7/26 (26%), Positives = 18/26 (69%)
 Frame = +2

Query: 107 TVSFIVSMDANRSSAHVMVNGYRRLL 184
           TV+ + +++   +  +V++NG RR++
Sbjct: 286 TVTKVRTLNKRATGVNVLINGRRRII 311


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 303 YNYGHEINSDYPPSFGLVIFFKT*YLSISKLI 208
           +N+   IN+D P    + IF    Y S  KLI
Sbjct: 500 FNFHITINADKPMKAAIRIFIGPKYDSHHKLI 531


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 73  YGREDGCLNGVYGFFYCINGRKQVVGPCDGKWLPS 177
           YG+ D  +  V GF Y  N + QVV      W  S
Sbjct: 377 YGQLDLLVRKVLGFGYESNVKYQVVPSALQMWSTS 411


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 303 YNYGHEINSDYPPSFGLVIFFKT*YLSISKLI 208
           +N+   IN+D P    + IF    Y S  KLI
Sbjct: 500 FNFHITINADKPMKAAIRIFIGPKYDSHHKLI 531


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -2

Query: 228 LSISKLIGPSMQCCSSRRR*P-FTITWADDLFASIDTIKETVNTIQTTILSPISSEINKT 52
           L ++ L+  S Q   S+   P  +   A D F S+ T+   +  ++  +++ +  + +  
Sbjct: 279 LGVTSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTVFVFMALMEYCLVNIVLGDSDTP 338

Query: 51  SFPLPPP 31
             P PPP
Sbjct: 339 PKPAPPP 345


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 73  YGREDGCLNGVYGFFYCINGRKQVVGPCDGKWLPS 177
           YG+ D  +  V GF Y  N + QVV      W  S
Sbjct: 377 YGQLDLLVRKVLGFGYESNVKYQVVPSALQMWSTS 411


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 73  YGREDGCLNGVYGFFYCINGRKQVVGPCDGKWLPS 177
           YG+ D  +  V GF Y  N + QVV      W  S
Sbjct: 3   YGQLDLLVRKVLGFGYESNVKYQVVPSALQMWSTS 37


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 188 AVVGDGNHLPSH 153
           A+   GNHLP H
Sbjct: 132 ALAAGGNHLPFH 143


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,429
Number of Sequences: 438
Number of extensions: 2547
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9391092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)