Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_D02
(446 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DC158A Cluster: UPI0000DC158A related cluster; n... 28 0.53
UniRef50_Q3TMK1 Cluster: Lung RCB-0558 LLC cDNA, RIKEN full-leng... 33 2.1
UniRef50_UPI0000DC12DE Cluster: UPI0000DC12DE related cluster; n... 33 2.8
UniRef50_Q8C9N2 Cluster: 3 days neonate thymus cDNA, RIKEN full-... 28 3.8
UniRef50_UPI0000DC1068 Cluster: UPI0000DC1068 related cluster; n... 32 4.9
UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092; ... 32 4.9
UniRef50_A7SCF7 Cluster: Predicted protein; n=1; Nematostella ve... 32 6.5
UniRef50_UPI00015A7172 Cluster: otopetrin 1; n=1; Danio rerio|Re... 31 8.6
UniRef50_UPI0000DC0B84 Cluster: UPI0000DC0B84 related cluster; n... 31 8.6
UniRef50_Q8IDH3 Cluster: Putative uncharacterized protein PF13_0... 31 8.6
UniRef50_Q8N393 Cluster: Zinc finger protein 786; n=9; Eutheria|... 31 8.6
>UniRef50_UPI0000DC158A Cluster: UPI0000DC158A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC158A UniRef100 entry -
Rattus norvegicus
Length = 337
Score = 28.3 bits (60), Expect(2) = 0.53
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 284 SCVHICRHRMVRVTSVKFIHTHAHNNTYMFNC 189
+C H C H R + HTH H +T+ C
Sbjct: 11 ACTHTCTH--ARKHTHTHTHTHTHTHTHTHRC 40
Score = 26.2 bits (55), Expect(2) = 0.53
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 77 HTHSRRCRHKHT 42
HTH+ RC H HT
Sbjct: 34 HTHTHRCAHTHT 45
>UniRef50_Q3TMK1 Cluster: Lung RCB-0558 LLC cDNA, RIKEN full-length
enriched library, clone:G730014J15 product:hypothetical
protein, full insert sequence; n=1; Mus musculus|Rep:
Lung RCB-0558 LLC cDNA, RIKEN full-length enriched
library, clone:G730014J15 product:hypothetical protein,
full insert sequence - Mus musculus (Mouse)
Length = 84
Score = 33.5 bits (73), Expect = 2.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 287 FSCVHICRHRMVRVTSVKFIHTHAHNNTY 201
FS H CRH RV + HTH H +T+
Sbjct: 53 FSVKHACRHSRTRVHTHTHTHTHTHTHTH 81
>UniRef50_UPI0000DC12DE Cluster: UPI0000DC12DE related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC12DE UniRef100 entry -
Rattus norvegicus
Length = 381
Score = 33.1 bits (72), Expect = 2.8
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Frame = -1
Query: 299 CA*PFSCVHICRHRMVRV---TSV---KFIHTHAHNNTY 201
CA +C H+C H V V TSV ++HTH H +T+
Sbjct: 185 CACMHACTHVCMHECVYVYVCTSVCVHVYVHTHTHTHTH 223
>UniRef50_Q8C9N2 Cluster: 3 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A630032M05
product:hypothetical Cysteine-rich region profile/Beta
tubulin containing protein, full insert sequence; n=1;
Mus musculus|Rep: 3 days neonate thymus cDNA, RIKEN
full-length enriched library, clone:A630032M05
product:hypothetical Cysteine-rich region profile/Beta
tubulin containing protein, full insert sequence - Mus
musculus (Mouse)
Length = 118
Score = 27.9 bits (59), Expect(2) = 3.8
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +3
Query: 153 FNLPEFEIRITFAIKHICIIMCVCM 227
F++P + + A+K +C+ +CVC+
Sbjct: 36 FDIPLLFLTLIIALKGVCVCVCVCV 60
Score = 23.8 bits (49), Expect(2) = 3.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 201 ICIIMCVCMY 230
+C+ +CVCMY
Sbjct: 64 VCVYVCVCMY 73
>UniRef50_UPI0000DC1068 Cluster: UPI0000DC1068 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1068 UniRef100 entry -
Rattus norvegicus
Length = 376
Score = 32.3 bits (70), Expect = 4.9
Identities = 22/102 (21%), Positives = 42/102 (41%)
Frame = -1
Query: 347 HGSAEMQLSTQLRAFACA*PFSCVHICRHRMVRVTSVKFIHTHAHNNTYMFNCKSDTYFK 168
+G + + + A CA +C+H+C H + + + H H H +T+ +S +
Sbjct: 268 YGCVHVCVHVCMCACVCACMCACMHVCAHPPMHMYTHTCAHPHIHTHTHTLTHRSRHTYI 327
Query: 167 FREVKVKKII*IFTNYLNCLL*KSAF*CPRHTHSRRCRHKHT 42
+ I ++ + S HT++ C HKHT
Sbjct: 328 HTHIHDPTIHPSIHPSIHPSI--SHPHPTMHTNTHTCTHKHT 367
>UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092;
n=3; Homo sapiens|Rep: CDNA FLJ46861 fis, clone
UTERU3011092 - Homo sapiens (Human)
Length = 291
Score = 32.3 bits (70), Expect = 4.9
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 326 LSTQLRAFACA*PFSCVHICRHRMVRVTSV-KFIHTHAHNNTYMFNC 189
+ T + + C ++C+HIC V ++H HA+ +M+ C
Sbjct: 127 ICTHMHTYMCIHMYTCIHICVFMCTMHAYVYSYVHMHAYVCVHMYTC 173
>UniRef50_A7SCF7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 412
Score = 31.9 bits (69), Expect = 6.5
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3
Query: 84 STPHAFAPLPP*TYTATMKIRKKSSA 7
STPH + PLPP YT T IR SSA
Sbjct: 200 STPHMY-PLPPHVYTPTTTIRLSSSA 224
>UniRef50_UPI00015A7172 Cluster: otopetrin 1; n=1; Danio rerio|Rep:
otopetrin 1 - Danio rerio
Length = 502
Score = 31.5 bits (68), Expect = 8.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 201 ICIIMCVCMYKLNGCYTDHSVSTDVN 278
+C+ +CVC+ ++ C DHSVS N
Sbjct: 246 VCVCVCVCVSIVHFCKNDHSVSEKCN 271
>UniRef50_UPI0000DC0B84 Cluster: UPI0000DC0B84 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0B84 UniRef100 entry -
Rattus norvegicus
Length = 300
Score = 31.5 bits (68), Expect = 8.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 287 FSCVHICRHRMVRVTSVKFIHTHAHNNTYMFNCK 186
++C++I H + + HTHAH +T ++ CK
Sbjct: 162 YACIYI--HILTHTLTCMHTHTHAHTHTLIYTCK 193
>UniRef50_Q8IDH3 Cluster: Putative uncharacterized protein PF13_0273;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PF13_0273 - Plasmodium falciparum (isolate 3D7)
Length = 2533
Score = 31.5 bits (68), Expect = 8.6
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 275 HICRHRMVRVTSVKFIHTHAHNNTYMFNCKSDTYFKFREVKVKKII*IFTNYLN 114
HIC ++ F+ N ++ C + F+F E K KK IF N+L+
Sbjct: 1518 HICVINKYKIDDTSFVSKFVANIDIVYECNNFFVFQF-EFKEKKYFLIFNNFLS 1570
>UniRef50_Q8N393 Cluster: Zinc finger protein 786; n=9;
Eutheria|Rep: Zinc finger protein 786 - Homo sapiens
(Human)
Length = 782
Score = 31.5 bits (68), Expect = 8.6
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -1
Query: 329 QLSTQLRAFACA*PFSCVHICRHRMVRVTSVKFIHTHAHNNTYMFNCK 186
+L++ RA PF C H C R R+ + +H HAH F+C+
Sbjct: 383 RLASPCRAHTGEKPFQCAH-CTKRF-RLRRLLQVHQHAHGGERPFSCR 428
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,774,511
Number of Sequences: 1657284
Number of extensions: 6306371
Number of successful extensions: 16307
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16149
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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