Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_D02
(446 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 28 0.035
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 28 0.035
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 24 0.75
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 22 3.0
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 22 3.0
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 22 3.0
DQ855489-1|ABH88176.1| 122|Tribolium castaneum chemosensory pro... 21 5.3
AJ973444-1|CAJ01491.1| 122|Tribolium castaneum hypothetical pro... 21 5.3
DQ855491-1|ABH88178.1| 144|Tribolium castaneum chemosensory pro... 20 9.3
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 20 9.3
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 20 9.3
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 28.3 bits (60), Expect = 0.035
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -1
Query: 326 LSTQLRAFACA*PFSCVHICRHRMVRVTSVKFIHTHAHNNTYMFNCKSDTY 174
L LR A + PF C + C + V + + H +H+N Y ++C+ +Y
Sbjct: 246 LEYHLRNHAGSKPFQC-NKCDYTCVNKSMLNS-HMKSHSNVYRYSCRDCSY 294
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 28.3 bits (60), Expect = 0.035
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -1
Query: 326 LSTQLRAFACA*PFSCVHICRHRMVRVTSVKFIHTHAHNNTYMFNCKSDTY 174
L LR A + PF C + C + V + + H +H+N Y ++C+ +Y
Sbjct: 4 LEYHLRNHAGSKPFQC-NKCDYTCVNKSMLNS-HMKSHSNVYRYSCRDCSY 52
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 23.8 bits (49), Expect = 0.75
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1
Query: 290 PFSCVHICRHRMVRVTSVKFIHTHAHNNTYMFNCK 186
P CV IC HR++ S +H H F CK
Sbjct: 134 PNQCV-IC-HRVLSCKSALQMHYRTHTGERPFKCK 166
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 80 RHTHSRRCRHKHTPLQ*KLEKN 15
+ THS +H H P++ L+K+
Sbjct: 98 QQTHSSIHQHHHDPMKMSLDKS 119
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 80 RHTHSRRCRHKHTPLQ*KLEKN 15
+ THS +H H P++ L+K+
Sbjct: 249 QQTHSSIHQHHHDPMKMSLDKS 270
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -1
Query: 80 RHTHSRRCRHKHTPLQ*KLEKN 15
+ THS +H H P++ L+K+
Sbjct: 308 QQTHSSIHQHHHDPMKMSLDKS 329
>DQ855489-1|ABH88176.1| 122|Tribolium castaneum chemosensory
protein 2 protein.
Length = 122
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 134 IFTNYLNCLL*K 99
+F NYL CLL K
Sbjct: 39 LFDNYLQCLLKK 50
>AJ973444-1|CAJ01491.1| 122|Tribolium castaneum hypothetical
protein protein.
Length = 122
Score = 21.0 bits (42), Expect = 5.3
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 134 IFTNYLNCLL*K 99
+F NYL CLL K
Sbjct: 39 LFDNYLQCLLKK 50
>DQ855491-1|ABH88178.1| 144|Tribolium castaneum chemosensory
protein 5 protein.
Length = 144
Score = 20.2 bits (40), Expect = 9.3
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 134 IFTNYLNCLL*K 99
+ NY+NCLL K
Sbjct: 52 LLLNYINCLLEK 63
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 20.2 bits (40), Expect = 9.3
Identities = 10/40 (25%), Positives = 16/40 (40%)
Frame = +1
Query: 220 CVCINLTDVTRTIRCRQM*THENGYAHANARNCVLSCISA 339
C C N + T+ C Q+ +N C C++A
Sbjct: 696 CFCENGNNKCFTMECPQVTCPDNMKLEKVPGECCAICVNA 735
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 20.2 bits (40), Expect = 9.3
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = +1
Query: 352 VNGFLISYYASLSGYNFVCYLIINY 426
+ L S Y ++GY F I+Y
Sbjct: 236 ITSSLSSLYTCIAGYEFNANFTISY 260
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,595
Number of Sequences: 336
Number of extensions: 1746
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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