BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_D02
(446 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-539|ABI30967.1| 604|Drosophila melanogaster CG32792-PD... 29 2.8
AE013599-3402|AAF46851.1| 1030|Drosophila melanogaster CG3701-PA... 29 2.8
>AE014298-539|ABI30967.1| 604|Drosophila melanogaster CG32792-PD
protein.
Length = 604
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 292 YAHANARNCVLSCISALPWRVNGFLISYYASLSGYNFVCYL 414
+AH RNCV C+S R G + Y L+ + +C L
Sbjct: 362 FAHYTQRNCVAECLSGWLIRHCGCVTFYMPRLNANDTICPL 402
>AE013599-3402|AAF46851.1| 1030|Drosophila melanogaster CG3701-PA
protein.
Length = 1030
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 193 LNIYVLLCACVCINLTDVTRTIRCRQM*THENGYAHANARNC 318
L++ VLL C+C+ L + T+ R T+E + H NC
Sbjct: 958 LSLAVLLLICLCVQLCIMDSTVCLRLEGTNELHFGHFLLTNC 999
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,202,334
Number of Sequences: 53049
Number of extensions: 325041
Number of successful extensions: 810
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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