Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_D02
(446 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 27 0.12
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 3.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 3.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 3.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 3.5
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 21 4.6
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 4.6
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 6.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 6.1
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 6.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 6.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 6.1
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.1
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 26.6 bits (56), Expect = 0.12
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 290 PFSCVHICRHRMVRVTSVKFIHTHAHNNTYMFNCKSDTY 174
PF C C + V + + H +H+N Y + C + TY
Sbjct: 16 PFKCEK-CSYSCVNKSMLNS-HLKSHSNVYQYRCANCTY 52
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 215 HNNTYMFNCKSDTYFK 168
HNN Y +N ++ Y K
Sbjct: 91 HNNNYKYNYNNNNYNK 106
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 215 HNNTYMFNCKSDTYFK 168
HNN Y +N ++ Y K
Sbjct: 91 HNNNYKYNYNNNNYNK 106
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 215 HNNTYMFNCKSDTYFK 168
HNN Y +N ++ Y K
Sbjct: 91 HNNNYKYNYNNNNYNK 106
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 3.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 215 HNNTYMFNCKSDTYFK 168
HNN Y +N ++ Y K
Sbjct: 91 HNNNYKYNYNNNNYNK 106
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 4.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 17 FFLIFIVAVYVYG 55
FFL +V +YVYG
Sbjct: 207 FFLPMLVMLYVYG 219
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.4 bits (43), Expect = 4.6
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +2
Query: 38 AVYVYGGSGANACGV 82
AV++ GGS A AC +
Sbjct: 186 AVHLVGGSSALACAI 200
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 6.1
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 215 HNNTYMFNCKSDTY 174
HNN Y +N ++ Y
Sbjct: 90 HNNNYKYNYNNNNY 103
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 6.1
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 215 HNNTYMFNCKSDTY 174
HNN Y +N ++ Y
Sbjct: 90 HNNNYKYNYNNNNY 103
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.0 bits (42), Expect = 6.1
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -1
Query: 242 SVKFIHTHAHNNTYMFNCKSDTYF 171
++ F + FNC SDT F
Sbjct: 109 AISFFNDDLSTRWIAFNCLSDTIF 132
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 6.1
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -1
Query: 242 SVKFIHTHAHNNTYMFNCKSDTYF 171
++ F + FNC SDT F
Sbjct: 109 AISFFNDDLSTRWIAFNCLSDTIF 132
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 6.1
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -1
Query: 242 SVKFIHTHAHNNTYMFNCKSDTYF 171
++ F + FNC SDT F
Sbjct: 109 AISFFNDDLSTRWIAFNCLSDTIF 132
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.6 bits (41), Expect = 8.1
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -2
Query: 196 LIAKVIRISNSGRL 155
++AKV+ SNSG+L
Sbjct: 1113 ILAKVLTSSNSGQL 1126
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,956
Number of Sequences: 438
Number of extensions: 2129
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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