Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_D01
(537 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887 64 5e-11
02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309 63 2e-10
11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733 60 1e-09
05_06_0233 + 26599068-26599466,26601214-26601829,26601871-266019... 50 2e-06
03_01_0644 - 4719954-4720022,4720445-4720912,4721009-4721312,472... 41 5e-04
05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717 37 0.012
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 35 0.036
01_01_0282 - 2349336-2349583,2349719-2349786,2349880-2349950,235... 35 0.036
09_04_0608 + 18924648-18924899,18926341-18926435,18926903-189272... 34 0.062
08_02_1279 - 25841767-25842017,25842181-25842418,25842685-258430... 34 0.062
06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627 34 0.062
01_06_0447 + 29452194-29452361,29453232-29453317,29453403-294536... 33 0.19
03_02_0489 + 8836306-8836500,8836906-8837082,8837175-8837321,883... 31 0.44
07_03_0982 + 23116343-23117089,23117227-23117313,23117424-231175... 31 0.58
06_03_1450 + 30246702-30247346,30248603-30248689,30248789-302489... 30 1.0
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 29 1.8
02_02_0121 + 7005356-7005418,7007533-7007632,7007713-7007810,700... 29 3.1
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 29 3.1
12_01_0751 - 6759380-6759686,6759770-6759859,6759964-6760211,676... 28 4.1
02_01_0403 - 2938242-2941334 28 4.1
01_02_0095 - 11076493-11077644,11077845-11077918,11078155-11078320 28 4.1
01_05_0099 - 18098169-18098390,18098878-18098972,18099063-180991... 28 5.4
09_04_0437 - 17587944-17588909 27 7.2
08_01_0305 - 2555227-2555635,2555785-2556254 27 7.2
06_01_0441 + 3130906-3131424,3131847-3132269 27 7.2
05_02_0031 - 5832475-5832696,5832789-5833064,5833303-5833380,583... 27 7.2
03_02_0646 + 10141967-10142476,10143721-10144254 27 7.2
01_06_1014 - 33810112-33811995 27 7.2
11_04_0307 + 16185405-16185713,16185847-16185942,16186626-161867... 27 9.5
08_02_0671 - 19890187-19890295,19891186-19891320,19891551-198919... 27 9.5
05_01_0201 - 1441063-1443836,1444658-1445758,1446367-1447179,144... 27 9.5
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 27 9.5
>05_03_0396 - 13477465-13477761,13477970-13478341,13478414-13478887
Length = 380
Score = 64.5 bits (150), Expect = 5e-11
Identities = 29/51 (56%), Positives = 40/51 (78%)
Frame = +2
Query: 383 RVTNCYKWYTSNAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 535
R+++ YK ++ F R K++G+++ WRGN ANVIRYFPTQALNFAFKD +
Sbjct: 119 RLSHPYKGI-ADCFGRTIKDEGVIALWRGNTANVIRYFPTQALNFAFKDHF 168
>02_05_0538 + 29841801-29842280,29842559-29842930,29843013-29843309
Length = 382
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +2
Query: 383 RVTNCYKWYTSNAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 535
R++ YK + F R K++G S WRGN ANVIRYFPTQALNFAFKD +
Sbjct: 121 RLSEPYKGI-GDCFGRTIKDEGFASLWRGNTANVIRYFPTQALNFAFKDYF 170
>11_06_0633 + 25681756-25682061,25682961-25683329,25683419-25683733
Length = 329
Score = 60.1 bits (139), Expect = 1e-09
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +2
Query: 413 SNAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFK 526
++AF R+ +E+G+ + WRGN ANVIRYFPTQA NFAFK
Sbjct: 72 ADAFGRVLREEGVAALWRGNQANVIRYFPTQAFNFAFK 109
>05_06_0233 +
26599068-26599466,26601214-26601829,26601871-26601917,
26602101-26602268
Length = 409
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +2
Query: 413 SNAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 535
++ R +++G+LS WRGN VIRY+P+ ALNF+ KD Y
Sbjct: 96 ADCVARTVRDEGVLSLWRGNGTAVIRYYPSVALNFSLKDLY 136
>03_01_0644 -
4719954-4720022,4720445-4720912,4721009-4721312,
4722321-4722745
Length = 421
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 431 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 535
I QGL FW+GNF N++R P +A+NF D Y
Sbjct: 171 IATTQGLKGFWKGNFVNILRTAPFKAVNFYAYDTY 205
>05_01_0505 + 4207841-4208455,4209982-4210143,4210247-4210717
Length = 415
Score = 36.7 bits (81), Expect = 0.012
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 410 TSNAFVRIPKEQGLLSFWRGNFANVIRYFPTQALN-FAF 523
T+ F I K +G +RGNF NVIR P++A+ FAF
Sbjct: 171 TAEVFQSIMKHEGWTGLFRGNFVNVIRVAPSKAIELFAF 209
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 35.1 bits (77), Expect = 0.036
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +2
Query: 419 AFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 535
+F I + +GLL F+RGN A+V R P AL++ ++Y
Sbjct: 83 SFRTISRTEGLLGFYRGNGASVARIVPYAALHYMAYEEY 121
>01_01_0282 -
2349336-2349583,2349719-2349786,2349880-2349950,
2350022-2350123,2350309-2350449,2350540-2350716,
2352228-2352338
Length = 305
Score = 35.1 bits (77), Expect = 0.036
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 428 RIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 535
RI +E+G +FW+GN ++ P A++F ++Y
Sbjct: 59 RIVREEGFGAFWKGNLVTIVHRLPYSAISFYSYERY 94
>09_04_0608 +
18924648-18924899,18926341-18926435,18926903-18927236,
18927345-18927582,18927813-18928069
Length = 391
Score = 34.3 bits (75), Expect = 0.062
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 407 YTSNAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 511
+ +FV I ++ G W GN N+IR PTQA+
Sbjct: 127 HIGGSFVEIIEQNGWQGLWAGNTINMIRIIPTQAI 161
>08_02_1279 -
25841767-25842017,25842181-25842418,25842685-25843018,
25843498-25843592,25845461-25845700
Length = 385
Score = 34.3 bits (75), Expect = 0.062
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 419 AFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 511
+FV I ++ G W GN N++R PTQAL
Sbjct: 127 SFVEIVEQNGWQGLWAGNTINMLRIIPTQAL 157
>06_03_0677 - 23440273-23440749,23440824-23440985,23442007-23442627
Length = 419
Score = 34.3 bits (75), Expect = 0.062
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 413 SNAFVRIPKEQGLLSFWRGNFANVIRYFPTQALN-FAF 523
+ F I K +G +RGNF NVIR P++A+ FAF
Sbjct: 174 TEVFQSIMKTEGWTGLFRGNFVNVIRVAPSKAIELFAF 211
>01_06_0447 +
29452194-29452361,29453232-29453317,29453403-29453610,
29454252-29454381,29454561-29454745,29454858-29454989,
29455747-29455851
Length = 337
Score = 32.7 bits (71), Expect = 0.19
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 428 RIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 535
++ + G+L F++GN A+V+R P AL++ ++Y
Sbjct: 73 KLKQHDGILGFYKGNGASVLRIVPYAALHYMAYERY 108
>03_02_0489 +
8836306-8836500,8836906-8837082,8837175-8837321,
8837636-8837737,8837824-8837894,8837992-8838059,
8838595-8838836
Length = 333
Score = 31.5 bits (68), Expect = 0.44
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 428 RIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 535
RI E+G +FW+GN + P +++F ++Y
Sbjct: 87 RIVYEEGFRAFWKGNLVTIAHRLPYSSISFYTYERY 122
>07_03_0982 +
23116343-23117089,23117227-23117313,23117424-23117555,
23118135-23118269,23118644-23118709,23118797-23118907,
23119237-23119329,23119555-23119659,23119752-23119829
Length = 517
Score = 31.1 bits (67), Expect = 0.58
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 223 RHFVRLCGPLWVDTCGQGRTSAHTE 149
RH R CG ++ D C QGRT+ E
Sbjct: 389 RHHCRNCGEIFCDKCSQGRTALTAE 413
>06_03_1450 +
30246702-30247346,30248603-30248689,30248789-30248920,
30249016-30249162,30250375-30250440,30250519-30250629,
30251551-30251584,30251667-30251743,30251829-30251906
Length = 458
Score = 30.3 bits (65), Expect = 1.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 223 RHFVRLCGPLWVDTCGQGRTSAHTE 149
RH R CG ++ D C QGRT T+
Sbjct: 359 RHHCRNCGDIFCDKCTQGRTPLTTD 383
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 446 GLLSFWRGNFANVIRYFPTQALNF 517
G+L+F+RGN NV++ P A+ F
Sbjct: 281 GMLAFFRGNGLNVVKVAPESAIRF 304
>02_02_0121 +
7005356-7005418,7007533-7007632,7007713-7007810,
7007933-7008021,7008111-7008171,7008253-7008339,
7008409-7008486,7008583-7008639,7008731-7008786,
7008877-7009012,7009103-7009324
Length = 348
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 218 MSNLADPVAFAKDFLGLAGISCLPVS 295
+ +LAD VA DF GL + CL VS
Sbjct: 102 VDDLADQVADVLDFFGLGSVMCLGVS 127
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -3
Query: 241 DWIGEIRHFVRLCGPL-W-VDTCGQGRTSAHTEWKNHEK 131
D G +HF R G W D CG+ R + H++WK H K
Sbjct: 147 DLTGIKKHFCRKHGEKKWKCDRCGK-RYAVHSDWKAHSK 184
>12_01_0751 -
6759380-6759686,6759770-6759859,6759964-6760211,
6760268-6760328,6760504-6760523,6760695-6760818,
6760941-6760987,6761744-6761866
Length = 339
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -1
Query: 474 KLPRQNESRPCSLGMRTK-AFDVYHL*QLVTRQICSAVQCGD 352
K+ RQN+ + C G+R K F H+ Q+ + + QC D
Sbjct: 90 KIFRQNDEKTCHQGLRIKMPFSHCHMLQMSVQLLIYVFQCED 131
>02_01_0403 - 2938242-2941334
Length = 1030
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 211 RLCGPLWVDTCGQGRTSAHTEWKNHEK 131
+LCGP+ V CG +TS + K H K
Sbjct: 640 KLCGPMLVHHCGSDKTS-YVSKKRHNK 665
>01_02_0095 - 11076493-11077644,11077845-11077918,11078155-11078320
Length = 463
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -3
Query: 280 GDTSQAKKVFGERDWIGEIRHFVRLCGPLWVDTCGQGRTS-AHTEWKNHEKRTPDF*SGD 104
GDT + K+++ E ++ E + RL L G T+ A W+ ++R DF
Sbjct: 321 GDTDRMKEIYKEWEYRYE-NYDPRLTNMLTRAHLRNGMTNEAELLWEKVKERGGDFDFET 379
Query: 103 LELFRDH 83
ELFR+H
Sbjct: 380 CELFREH 386
>01_05_0099 -
18098169-18098390,18098878-18098972,18099063-18099131,
18099277-18099352,18101412-18101524,18104137-18104185,
18104540-18104572,18105446-18105552,18106892-18106990,
18107122-18107203
Length = 314
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 416 NAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAF 523
+ F I K +GL +RG ++ FPT A + F
Sbjct: 66 SGFQHILKNEGLPGLYRGLSPTIVALFPTWAAKYCF 101
>09_04_0437 - 17587944-17588909
Length = 321
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 413 SNAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDK 532
++A VR+ +++G+ S WRG+ V R A A D+
Sbjct: 172 ADAIVRMARDEGVCSLWRGSPLTVKRAMIVAASQLATYDQ 211
>08_01_0305 - 2555227-2555635,2555785-2556254
Length = 292
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3
Query: 514 VERLSREVPDDIGEVTTPE 458
+ERL RE+ D GE TTPE
Sbjct: 43 LERLGREIGDRSGENTTPE 61
>06_01_0441 + 3130906-3131424,3131847-3132269
Length = 313
Score = 27.5 bits (58), Expect = 7.2
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -3
Query: 178 GQGRTSAHTEWKNHEKRTPDF*SGDLELFRDH-RSTGVGVCTFLKFDRSRSLA 23
GQGR S H W H T +GD+++ H + G + T L + R R L+
Sbjct: 33 GQGRASVHAAWTVH---THHLNAGDVDILMLHSAANGRYLATGLGWTRRRLLS 82
>05_02_0031 -
5832475-5832696,5832789-5833064,5833303-5833380,
5833464-5833550,5833639-5833699,5833792-5833880,
5834001-5834098,5834197-5834296,5834876-5834953
Length = 362
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 218 MSNLADPVAFAKDFLGLAGISCLPVS 295
+ +LAD VA DF GL + CL V+
Sbjct: 107 VEDLADQVADVLDFFGLGSVMCLGVT 132
>03_02_0646 + 10141967-10142476,10143721-10144254
Length = 347
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 416 NAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDK 532
+A I E+GL + W+G ++R P QA+ +A D+
Sbjct: 294 HAIRTIYTEEGLRALWKGLLPRLMRIPPGQAIMWAVADQ 332
>01_06_1014 - 33810112-33811995
Length = 627
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 339 NLTQHQMGSYRACHSETGRQEIPAKPRKSLANATG 235
N T G++RAC E +QEI P K+ N G
Sbjct: 267 NATWDFSGTHRACLVEEYKQEIEISPVKNQPNTDG 301
>11_04_0307 +
16185405-16185713,16185847-16185942,16186626-16186730,
16186938-16187090,16188395-16188478,16188566-16188694,
16188986-16189165,16189555-16189677,16189678-16189794,
16189889-16190053
Length = 486
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 209 IMWSSLGGYLRTRKDFGTHGMEKPR 135
++W L GYL T + F H +EK R
Sbjct: 132 LVWKLLLGYLPTERAFWPHELEKKR 156
>08_02_0671 -
19890187-19890295,19891186-19891320,19891551-19891917,
19892909-19893044,19894924-19894974,19895053-19895134,
19895801-19895853,19895989-19896065,19896234-19896273,
19897666-19897767,19897989-19898031,19898127-19899288,
19899902-19900271
Length = 908
Score = 27.1 bits (57), Expect = 9.5
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 295 RMTCPVAAHLMLRQIASSNVPALYSRTDLPSDQLLQVVYVERLRPHSQGAG-SALILA 465
R+ P+ M +A ++ A+ +RT V ++RLR H GAG ALIL+
Sbjct: 47 RVPTPIQRKAMPLILAGHDIAAM-ARTGSGKTAAFLVPMIQRLRRHDAGAGIRALILS 103
>05_01_0201 -
1441063-1443836,1444658-1445758,1446367-1447179,
1447386-1447440
Length = 1580
Score = 27.1 bits (57), Expect = 9.5
Identities = 23/85 (27%), Positives = 32/85 (37%)
Frame = +3
Query: 171 PCPQVSTQRGPHNRTKCRISPIQSRSPKTFLAWLVSPACLSPNDMPCSCPSDAASNC*LQ 350
P P VS P + T C SP+ + SP A VSP PC P +C L
Sbjct: 246 PAPCVSPVAAP-SPTPCA-SPVAAPSP----APCVSPVAAPSPAPPCKSPVPEDKSCELT 299
Query: 351 CPRTVQQNRSAE*PTATSGIRRTPS 425
+ N++ P + P+
Sbjct: 300 ANTVTESNKNIPGPDVQACNNEVPT 324
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 437 KEQGLLSFWRGNFANVIRYFPTQALNF 517
+E L F+RGN NV++ P A+ F
Sbjct: 279 REGSLRGFFRGNGLNVVKVAPESAIRF 305
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,118,368
Number of Sequences: 37544
Number of extensions: 401253
Number of successful extensions: 1246
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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