Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_C21
(196 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0208 + 1532691-1533209 54 1e-08
02_03_0190 + 16188329-16188514,16188552-16188885,16190275-161907... 54 1e-08
07_01_0209 + 1544347-1544796 54 2e-08
01_04_0090 - 15940935-15941438 53 4e-08
07_01_0211 + 1568646-1568716,1568722-1569085 52 6e-08
07_01_0212 + 1571631-1572149 51 1e-07
07_01_0210 + 1555941-1556390 50 2e-07
02_05_1002 + 33426561-33427079 50 3e-07
07_01_0207 + 1528951-1529499 49 5e-07
02_05_1001 + 33423562-33424098 49 5e-07
07_01_0204 + 1476517-1477047 48 8e-07
07_01_0203 + 1469575-1470045 48 1e-06
07_01_0199 - 1420982-1421452 48 1e-06
07_01_0195 - 1387831-1388301 48 1e-06
07_01_0191 - 1354678-1355148 48 1e-06
07_01_0187 - 1321525-1321995 48 1e-06
02_05_1004 + 33444248-33444847 48 1e-06
07_01_0200 + 1433859-1434377 48 1e-06
07_01_0198 + 1417625-1418104 48 1e-06
07_01_0196 + 1400708-1401226 48 1e-06
07_01_0194 + 1384474-1384953 48 1e-06
07_01_0192 + 1367558-1368076 48 1e-06
07_01_0190 + 1351321-1351800 48 1e-06
07_01_0188 + 1334405-1334923 48 1e-06
07_01_0186 + 1318168-1318647 48 1e-06
07_01_0958 - 8041483-8042013 47 2e-06
07_01_0959 + 8055700-8055847,8056216-8056529,8057455-8057898 47 2e-06
06_02_0304 + 14053190-14053717 47 2e-06
02_05_1005 - 33445738-33446274 46 6e-06
10_02_0159 + 6020441-6020971 45 7e-06
07_01_0205 + 1481380-1481892 45 7e-06
07_01_0206 + 1484107-1484583 41 1e-04
07_01_0202 + 1464905-1465423 41 1e-04
04_03_0204 + 12643435-12644001 41 2e-04
12_02_1226 - 27182423-27182768,27182855-27183765 40 2e-04
02_03_0189 + 16182358-16182925,16183133-16183188 40 4e-04
03_05_1029 - 29835389-29835979 37 0.003
04_03_0202 + 12637271-12637499,12638217-12638821 36 0.003
05_07_0345 - 29417029-29417769 36 0.006
04_03_0203 + 12640502-12641074 36 0.006
04_04_0290 - 24174361-24174744,24175057-24175209,24175323-241755... 26 3.7
02_02_0211 + 7898434-7898574,7898759-7899349,7899575-7899821,790... 25 6.4
11_06_0117 + 20302795-20304816 25 8.5
10_01_0196 + 2142132-2142416,2142882-2143574 25 8.5
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 25 8.5
04_04_1032 - 30259180-30260519,30260650-30260720,30261099-302621... 25 8.5
01_06_1374 + 36740860-36741365,36742529-36743003,36743084-36743890 25 8.5
>07_01_0208 + 1532691-1533209
Length = 172
Score = 54.4 bits (125), Expect = 1e-08
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W ST +GCA + ++ CNY P GNYI QSPY
Sbjct: 128 GHYTQVVWRSSTAIGCARVVCNGSLG--VFITCNYSPPGNYIGQSPY 172
>02_03_0190 +
16188329-16188514,16188552-16188885,16190275-16190745,
16191055-16191249,16191519-16191643,16192082-16192142,
16192774-16193023,16193129-16193279,16193594-16193902
Length = 693
Score = 54.4 bits (125), Expect = 1e-08
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 35 KSKPKIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
K + G YTQ+ W+ ST VGCA + D ++ CNY P GN Q PY
Sbjct: 264 KDGQECGEYTQLMWTNSTRVGCASVTCDDSAGGGTFIACNYDPPGNVAGQRPY 316
Score = 47.6 bits (108), Expect = 1e-06
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 32 DKSKPKIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
+K K GHYTQM W+++T VGCA + + +++C Y P GN + Y
Sbjct: 113 EKQFYKCGHYTQMVWAKTTKVGCAAVNCDADRGT--FIICEYDPPGNVLGVLAY 164
>07_01_0209 + 1544347-1544796
Length = 149
Score = 53.6 bits (123), Expect = 2e-08
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W +ST +GCA + D F + CNY P GN++ QSPY
Sbjct: 105 GHYTQVVWRDSTAIGCARVVC-DGDLGVF-ITCNYSPPGNFVGQSPY 149
>01_04_0090 - 15940935-15941438
Length = 167
Score = 52.8 bits (121), Expect = 4e-08
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W +ST+VGCA ++ + +++CNY P GN + + PY
Sbjct: 123 GHYTQVVWRDSTNVGCARVRCDANR--GIFIICNYEPRGNIVGRRPY 167
>07_01_0211 + 1568646-1568716,1568722-1569085
Length = 144
Score = 52.0 bits (119), Expect = 6e-08
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ WS ST +GCA + + + ++ CNY P GNY + PY
Sbjct: 100 GHYTQVVWSNSTAIGCARVVCDNS--HGVFITCNYSPPGNYNGKPPY 144
>07_01_0212 + 1571631-1572149
Length = 172
Score = 51.2 bits (117), Expect = 1e-07
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W ST +GCA + + V CNY P GN +SPY
Sbjct: 126 GHYTQVVWYNSTDIGCATVVCETGDNTGVVVACNYWPPGNIPGESPY 172
>07_01_0210 + 1555941-1556390
Length = 149
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ WS ST +GCA + D F + CNY P GN +SPY
Sbjct: 105 GHYTQVVWSNSTAIGCARV-VCDNSLGVF-ITCNYSPPGNVDGESPY 149
>02_05_1002 + 33426561-33427079
Length = 172
Score = 50.0 bits (114), Expect = 3e-07
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W + VGCA++ + + ++ CNY P GNY+ PY
Sbjct: 128 GHYTQIMWRATRRVGCAMVACYNGRGT--FITCNYDPPGNYVGMRPY 172
>07_01_0207 + 1528951-1529499
Length = 182
Score = 49.2 bits (112), Expect = 5e-07
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = +2
Query: 56 HYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
HYTQ+ W+ +T +GCA + +V+CNY P GN DQSPY
Sbjct: 139 HYTQLVWNATTAIGCAEVVCDGDAG--VFVICNYYPPGNIPDQSPY 182
>02_05_1001 + 33423562-33424098
Length = 178
Score = 49.2 bits (112), Expect = 5e-07
Identities = 21/47 (44%), Positives = 27/47 (57%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W +T VGCA+ + Y VC+Y P GNY+ PY
Sbjct: 134 GHYTQVVWRRTTAVGCALATCAGGRGT--YGVCSYNPPGNYVGVRPY 178
>07_01_0204 + 1476517-1477047
Length = 176
Score = 48.4 bits (110), Expect = 8e-07
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W +T +GCA + + CNY P GN+ DQ PY
Sbjct: 132 GHYTQVVWRSTTSIGCASAACSN--GGGVIISCNYSPPGNWPDQRPY 176
>07_01_0203 + 1469575-1470045
Length = 156
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W ++T VGCA + + + +C Y PAGN +Q PY
Sbjct: 112 GHYTQVVWRDTTAVGCAAVACNANR--GVFFICTYFPAGNVQNQRPY 156
>07_01_0199 - 1420982-1421452
Length = 156
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W ++T VGCA + + + +C Y PAGN +Q PY
Sbjct: 112 GHYTQVVWRDTTAVGCAAVACNANR--GVFFICTYFPAGNVQNQRPY 156
>07_01_0195 - 1387831-1388301
Length = 156
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W ++T VGCA + + + +C Y PAGN +Q PY
Sbjct: 112 GHYTQVVWRDTTAVGCAAVACNANR--GVFFICTYFPAGNVQNQRPY 156
>07_01_0191 - 1354678-1355148
Length = 156
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W ++T VGCA + + + +C Y PAGN +Q PY
Sbjct: 112 GHYTQVVWRDTTAVGCAAVACNANR--GVFFICTYFPAGNVQNQRPY 156
>07_01_0187 - 1321525-1321995
Length = 156
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W ++T VGCA + + + +C Y PAGN +Q PY
Sbjct: 112 GHYTQVVWRDTTAVGCAAVACNANR--GVFFICTYFPAGNVQNQRPY 156
>02_05_1004 + 33444248-33444847
Length = 199
Score = 48.0 bits (109), Expect = 1e-06
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W +T VGCA + D ++ CNY P GN + + PY
Sbjct: 156 GHYTQIVWRGTTSVGCARVACDD---GGVFMTCNYYPPGNVVGERPY 199
>07_01_0200 + 1433859-1434377
Length = 172
Score = 47.6 bits (108), Expect = 1e-06
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W +T +GCA + + CNY P GN+ DQ PY
Sbjct: 128 GHYTQVVWRSTTSIGCA--RAACSNGGGVIISCNYFPPGNFPDQRPY 172
>07_01_0198 + 1417625-1418104
Length = 159
Score = 47.6 bits (108), Expect = 1e-06
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 56 HYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPYK 196
HYTQ+ WS +T +GCA + + ++ CNY PAGN+ + P++
Sbjct: 109 HYTQVMWSRTTAIGCARVDCDN---GGVFITCNYNPAGNFQGERPFE 152
>07_01_0196 + 1400708-1401226
Length = 172
Score = 47.6 bits (108), Expect = 1e-06
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W +T +GCA + + CNY P GN+ DQ PY
Sbjct: 128 GHYTQVVWRSTTSIGCA--RAACSNGGGVIISCNYFPPGNFPDQRPY 172
>07_01_0194 + 1384474-1384953
Length = 159
Score = 47.6 bits (108), Expect = 1e-06
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 56 HYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPYK 196
HYTQ+ WS +T +GCA + + ++ CNY PAGN+ + P++
Sbjct: 109 HYTQVMWSRTTAIGCARVDCDN---GGVFITCNYNPAGNFQGERPFE 152
>07_01_0192 + 1367558-1368076
Length = 172
Score = 47.6 bits (108), Expect = 1e-06
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W +T +GCA + + CNY P GN+ DQ PY
Sbjct: 128 GHYTQVVWRSTTSIGCA--RAACSNGGGVIISCNYFPPGNFPDQRPY 172
>07_01_0190 + 1351321-1351800
Length = 159
Score = 47.6 bits (108), Expect = 1e-06
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 56 HYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPYK 196
HYTQ+ WS +T +GCA + + ++ CNY PAGN+ + P++
Sbjct: 109 HYTQVMWSRTTAIGCARVDCDN---GGVFITCNYNPAGNFQGERPFE 152
>07_01_0188 + 1334405-1334923
Length = 172
Score = 47.6 bits (108), Expect = 1e-06
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W +T +GCA + + CNY P GN+ DQ PY
Sbjct: 128 GHYTQVVWRSTTSIGCA--RAACSNGGGVIISCNYFPPGNFPDQRPY 172
>07_01_0186 + 1318168-1318647
Length = 159
Score = 47.6 bits (108), Expect = 1e-06
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 56 HYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPYK 196
HYTQ+ WS +T +GCA + + ++ CNY PAGN+ + P++
Sbjct: 109 HYTQVMWSRTTAIGCARVDCDN---GGVFITCNYNPAGNFQGERPFE 152
>07_01_0958 - 8041483-8042013
Length = 176
Score = 47.2 bits (107), Expect = 2e-06
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCA-VLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ WS +T +GCA V + + CNY P GN + PY
Sbjct: 129 GHYTQVVWSRTTQIGCARVTGCNINGRSSTLIACNYNPRGNINGERPY 176
>07_01_0959 + 8055700-8055847,8056216-8056529,8057455-8057898
Length = 301
Score = 46.8 bits (106), Expect = 2e-06
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCA-VLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ WS +T +GCA V + + CNY P GN + PY
Sbjct: 254 GHYTQVVWSRTTQIGCARVTGCNINGRSSTLIACNYNPRGNINGKRPY 301
>06_02_0304 + 14053190-14053717
Length = 175
Score = 46.8 bits (106), Expect = 2e-06
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 47 KIGHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
+ GHYTQ+ W+ +T +GCA + +VVC+Y P GN + PY
Sbjct: 119 RCGHYTQVTWARTTRLGCAAVTCDS---GATFVVCSYDPPGNTNGRGPY 164
>02_05_1005 - 33445738-33446274
Length = 178
Score = 45.6 bits (103), Expect = 6e-06
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHY QM W +ST VGCA + + + C+Y P GN + Q P+
Sbjct: 135 GHYKQMMWRDSTQVGCATVTCSS---GETLMACHYEPQGNIMGQKPF 178
>10_02_0159 + 6020441-6020971
Length = 176
Score = 45.2 bits (102), Expect = 7e-06
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCA-VLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W +S +GCA V+ +R ++ CNY P GN+ + P+
Sbjct: 124 GHYTQVVWRKSVRIGCARVVCAANR---GVFITCNYDPPGNFNGERPF 168
>07_01_0205 + 1481380-1481892
Length = 170
Score = 45.2 bits (102), Expect = 7e-06
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 56 HYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
HYTQ+ W + +VGCA + + CNY P GN ++ PY
Sbjct: 125 HYTQVVWRRTAYVGCARVACNTNNGIGTIIACNYYPGGNIYNERPY 170
>07_01_0206 + 1484107-1484583
Length = 158
Score = 41.1 bits (92), Expect = 1e-04
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 56 HYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
HYTQ+ W + +VGCA + + CNY P GN ++ PY
Sbjct: 114 HYTQVVWRRTAYVGCARVACNTNGIGTI-IACNYFPRGNMKNERPY 158
>07_01_0202 + 1464905-1465423
Length = 172
Score = 41.1 bits (92), Expect = 1e-04
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGC--AVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
GHYTQ+ W +T +GC AV D + CNY P GN ++ PY
Sbjct: 129 GHYTQIVWRSTTSIGCGRAVCNNGD-----VLISCNYFPPGNVPNERPY 172
>04_03_0204 + 12643435-12644001
Length = 188
Score = 40.7 bits (91), Expect = 2e-04
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
G YTQ+ W +T +GCA + R VC+Y P GN + Q PY
Sbjct: 144 GAYTQVVWRATTQLGCA--RRTCRNGVDTVAVCDYYPPGNIVGQRPY 188
>12_02_1226 - 27182423-27182768,27182855-27183765
Length = 418
Score = 40.3 bits (90), Expect = 2e-04
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +2
Query: 17 KQSDFDKSKPKIG----HYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQ 184
K D+ + K G HYT + W +T VGC + +VC+Y P GNY+
Sbjct: 359 KSYDYKSNSCKAGAMCTHYTAIVWKNTTAVGCGRVVCTS---GDTIMVCSYWPPGNYVGV 415
Query: 185 SPY 193
PY
Sbjct: 416 KPY 418
>02_03_0189 + 16182358-16182925,16183133-16183188
Length = 207
Score = 39.5 bits (88), Expect = 4e-04
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 56 HYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGN 172
HY QM W+++T VGCA + + ++VC Y P GN
Sbjct: 137 HYKQMVWAKTTKVGCASVSCDANRGT--FMVCEYDPPGN 173
>03_05_1029 - 29835389-29835979
Length = 196
Score = 36.7 bits (81), Expect = 0.003
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
G YTQ+ W + VGCA +C Y P GN QSPY
Sbjct: 153 GTYTQVVWRRTAEVGCAQATCTT---GATLTICLYNPHGNVQGQSPY 196
>04_03_0202 + 12637271-12637499,12638217-12638821
Length = 277
Score = 36.3 bits (80), Expect = 0.003
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 59 YTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
YTQ+ W +T VGC + +VC+Y P GNY PY
Sbjct: 236 YTQVVWRNTTQVGCGRIVCDS---GDSLLVCDYFPPGNYGTGRPY 277
>05_07_0345 - 29417029-29417769
Length = 246
Score = 35.5 bits (78), Expect = 0.006
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCAVLQTQDRQWNKFYVVCNYGPAGNYIDQSP 190
GH+TQ+ W+++ VGC + ++ C+Y P GN+ + P
Sbjct: 202 GHFTQIVWNDTKLVGCG---RSECVAGGVFITCSYDPPGNWKGEVP 244
>04_03_0203 + 12640502-12641074
Length = 190
Score = 35.5 bits (78), Expect = 0.006
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = +2
Query: 53 GHYTQMAWSESTHVGCA-----VLQTQDRQWNKFYVVCNYGPAGNYIDQSPY 193
G YTQM W +T +GCA L VC Y P GN Q PY
Sbjct: 139 GEYTQMVWRATTQIGCARWLCRCLGDTCPLVLDTVAVCEYYPPGNIAGQRPY 190
>04_04_0290 -
24174361-24174744,24175057-24175209,24175323-24175581,
24175659-24176167
Length = 434
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -3
Query: 149 IQRRIYSTVDLEF-AKQHIRREW 84
+ RR++ST+DLEF A I EW
Sbjct: 166 LDRRLFSTIDLEFCACYTIELEW 188
>02_02_0211 +
7898434-7898574,7898759-7899349,7899575-7899821,
7900020-7900118,7900158-7900321,7900371-7900870,
7901007-7901256,7901461-7901549,7901823-7902064,
7902175-7902479,7902798-7902906,7903150-7903313
Length = 966
Score = 25.4 bits (53), Expect = 6.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 60 THRWHGLSPLTSDVLFCKLKIDSGIN 137
T W GLS L S + CK+ I GI+
Sbjct: 790 TLTWKGLSTLLSFLDSCKIDIQKGIS 815
>11_06_0117 + 20302795-20304816
Length = 673
Score = 25.0 bits (52), Expect = 8.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 95 GCAVLQTQDRQWNKFY 142
GC +L+ D WN+FY
Sbjct: 633 GCTLLRYIDLSWNRFY 648
>10_01_0196 + 2142132-2142416,2142882-2143574
Length = 325
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +2
Query: 113 TQDRQWNKFYVVCNYGPAGNYI 178
T D W KFY C + G+ I
Sbjct: 100 TDDENWKKFYASCTHMGRGSKI 121
>07_03_1575 -
27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/20 (60%), Positives = 14/20 (70%), Gaps = 3/20 (15%)
Frame = +2
Query: 146 VCNYG---PAGNYIDQSPYK 196
VC+Y PA N IDQSP+K
Sbjct: 670 VCSYANGLPAENKIDQSPHK 689
>04_04_1032 -
30259180-30260519,30260650-30260720,30261099-30262118,
30263886-30264121
Length = 888
Score = 25.0 bits (52), Expect = 8.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 5 EAPLKQSDFDKSKPKIGHYTQMAWSESTHVGCAVLQTQD 121
E LKQ D ++ KI + + S+S C+ +T+D
Sbjct: 373 EGYLKQPDSFSAEQKISEFAEKQRSDSCERECSETETED 411
>01_06_1374 + 36740860-36741365,36742529-36743003,36743084-36743890
Length = 595
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 175 VITSRPVVAYNVEFIPLSILSLQNSTSDVSGLRPCHLCVMAYF 47
++ +RP +N+EF P S S + T D H V+AY+
Sbjct: 536 LLMARPF--WNIEFTPPSPESFNHMTEDGEPCVDSHAQVLAYY 576
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,622,242
Number of Sequences: 37544
Number of extensions: 97138
Number of successful extensions: 314
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 14,793,348
effective HSP length: 44
effective length of database: 13,141,412
effective search space used: 262828240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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