Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_C21
(196 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 23 0.25
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 0.33
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 0.33
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 20 2.3
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 20 2.3
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 20 2.3
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 20 2.3
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 19 4.1
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 19 5.4
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 19 5.4
DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. 19 7.1
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 19 7.1
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 19 7.1
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 19 7.1
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 18 9.4
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 18 9.4
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 18 9.4
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 18 9.4
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 18 9.4
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 23.4 bits (48), Expect = 0.25
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 65 QMAWSESTHVGCAVLQ-TQDRQWNKFYVVCNYGPAGNY 175
Q+ W E+ + G VL+ D+ W V+ N GNY
Sbjct: 87 QLQWDEADYGGIGVLRLPPDKVWKPDIVLFN-NADGNY 123
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 0.33
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 86 WTQTMPSVCNGLF 48
WT T P++C G+F
Sbjct: 495 WTITTPAICVGVF 507
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 0.33
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 86 WTQTMPSVCNGLF 48
WT T P++C G+F
Sbjct: 548 WTITTPAICVGVF 560
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.2 bits (40), Expect = 2.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 108 CKLKIDSGINSTLYATTGRLVIT 176
C+ K + L AT GRLVIT
Sbjct: 181 CRTKHRLTGETRLSATKGRLVIT 203
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 2.3
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 106 NSTSDVSGLRPCHLCVMAYFGFRL 35
N+ + GL+ CH V G+++
Sbjct: 136 NNVQGLRGLKSCHTGVGRNVGYKI 159
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 2.3
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 106 NSTSDVSGLRPCHLCVMAYFGFRL 35
N+ + GL+ CH V G+++
Sbjct: 136 NNVQGLRGLKSCHTGVGRNVGYKI 159
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.2 bits (40), Expect = 2.3
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 106 NSTSDVSGLRPCHLCVMAYFGFRL 35
N+ + GL+ CH V G+++
Sbjct: 136 NNVQGLRGLKSCHTGVGRNVGYKI 159
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 19.4 bits (38), Expect = 4.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -1
Query: 79 RPCHLCVMAYFGFRLVE 29
RP H + Y G +VE
Sbjct: 334 RPDHAVLCVYMGLSMVE 350
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 19.0 bits (37), Expect = 5.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 71 PSVCNGLFWV*TCRS 27
P+V + LFW+ C S
Sbjct: 41 PTVFSVLFWLGYCNS 55
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 19.0 bits (37), Expect = 5.4
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 71 PSVCNGLFWV*TCRS 27
P+V + LFW+ C S
Sbjct: 489 PTVFSVLFWLGYCNS 503
>DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein.
Length = 152
Score = 18.6 bits (36), Expect = 7.1
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -1
Query: 67 LCVMAYFGFRLVEVTL 20
LC+++Y R ++TL
Sbjct: 11 LCIVSYMMVRCDDITL 26
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 18.6 bits (36), Expect = 7.1
Identities = 6/25 (24%), Positives = 9/25 (36%)
Frame = +2
Query: 74 WSESTHVGCAVLQTQDRQWNKFYVV 148
W GC L +WN + +
Sbjct: 493 WPHEDKRGCYQLAINHIRWNSAFAI 517
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 18.6 bits (36), Expect = 7.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 120 IDSGINSTLYATTGR 164
I+SG+N +YA R
Sbjct: 381 INSGMNPVIYACWSR 395
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 18.6 bits (36), Expect = 7.1
Identities = 6/25 (24%), Positives = 9/25 (36%)
Frame = +2
Query: 74 WSESTHVGCAVLQTQDRQWNKFYVV 148
W GC L +WN + +
Sbjct: 583 WPHEDKRGCYQLAINHIRWNSAFAI 607
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +2
Query: 32 DKSKPKI 52
DKSKPK+
Sbjct: 147 DKSKPKV 153
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +2
Query: 32 DKSKPKI 52
DKSKPK+
Sbjct: 152 DKSKPKV 158
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 18.2 bits (35), Expect = 9.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 190 GRLIDVITSRPVVAYNVEFIPL 125
GRL+D + V +V+F+ L
Sbjct: 332 GRLLDFVEKGRVKFSSVQFLVL 353
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +2
Query: 32 DKSKPKI 52
DKSKPK+
Sbjct: 152 DKSKPKV 158
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = +2
Query: 149 CNYGPAGNYI 178
CN GPA Y+
Sbjct: 407 CNAGPAKYYL 416
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,273
Number of Sequences: 438
Number of extensions: 1169
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used: 2541420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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