Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_C15
(429 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens ... 107 1e-23
BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein. 100 2e-21
BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein. 100 2e-21
DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid b... 97 2e-20
U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding prot... 96 4e-20
M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein. 96 4e-20
BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger, ... 96 4e-20
AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9 p... 96 4e-20
DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid b... 93 4e-19
BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (... 93 4e-19
BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domai... 85 1e-16
DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid b... 82 9e-16
AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid b... 58 1e-08
BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein. 55 1e-07
BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein. 55 1e-07
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 51 1e-06
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 51 1e-06
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 51 1e-06
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 51 1e-06
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 51 1e-06
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 51 1e-06
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 51 1e-06
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 51 1e-06
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 51 1e-06
BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein. 50 4e-06
BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domai... 50 4e-06
AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domai... 50 4e-06
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 48 1e-05
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 48 1e-05
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 48 1e-05
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 48 1e-05
BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for IM... 41 0.002
BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein. 39 0.006
AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domai... 39 0.006
AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domai... 39 0.006
AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens ... 39 0.006
AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens ... 39 0.006
AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein. 39 0.006
U79569-1|AAD00321.1| 269|Homo sapiens no arches protein. 33 0.54
EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and polyadenyl... 33 0.54
CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein. 33 0.54
BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein. 33 0.54
BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and polyadenyl... 33 0.54
AK091495-1|BAC03676.1| 212|Homo sapiens protein ( Homo sapiens ... 33 0.54
M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein. 32 0.72
D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein. 32 0.72
DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein. 32 0.72
BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domai... 32 0.72
AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein pr... 32 0.72
AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domai... 32 0.72
AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens ... 32 0.72
AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens ... 32 0.72
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 32 0.72
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 32 0.72
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 32 0.72
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 32 0.72
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 32 0.72
AF074086-5|AAD21095.2| 666|Homo sapiens gag protein. 32 0.72
AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein. 32 0.72
AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein. 32 0.72
AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domai... 31 1.3
AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domai... 31 1.3
AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein. 31 1.3
AK128465-1|BAC87453.1| 310|Homo sapiens protein ( Homo sapiens ... 31 1.7
U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein. 31 2.2
M80482-1|AAA59998.1| 969|Homo sapiens subtilisin-like protease ... 31 2.2
D87995-1|BAA21793.1| 956|Homo sapiens PACE4A-II protein. 31 2.2
D87994-1|BAA21792.1| 962|Homo sapiens PACE4E-II protein. 31 2.2
D87993-1|BAA21791.1| 975|Homo sapiens PACE4E-I protein. 31 2.2
BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domai... 31 2.2
BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif prote... 31 2.2
BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif prote... 31 2.2
BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif prote... 31 2.2
BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif prote... 31 2.2
BC000218-1|AAH00218.1| 618|Homo sapiens delta-like 3 (Drosophil... 31 2.2
AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein pr... 31 2.2
AK075302-1|BAC11535.1| 587|Homo sapiens protein ( Homo sapiens ... 31 2.2
AF241373-1|AAF62542.1| 618|Homo sapiens DLL3 protein precursor ... 31 2.2
AB208955-1|BAD92192.1| 800|Homo sapiens paired basic amino acid... 31 2.2
AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein. 31 2.2
AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein. 31 2.2
AB001914-4|BAA21627.1| 975|Homo sapiens PACE4E-I protein. 31 2.2
AB001914-3|BAA21626.1| 962|Homo sapiens PACE4E-II protein. 31 2.2
AB001914-2|BAA21625.1| 956|Homo sapiens PACE4A-II protein. 31 2.2
AB001914-1|BAA21624.1| 969|Homo sapiens PACE4A-I protein. 31 2.2
BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein. 30 2.9
AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular... 30 2.9
AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding ... 30 2.9
AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding ... 30 2.9
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 29 5.1
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 29 5.1
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 29 5.1
L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1... 29 5.1
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 29 5.1
D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternativel... 29 5.1
BC105930-1|AAI05931.1| 651|Homo sapiens ZNF816A protein protein. 29 5.1
BC105740-1|AAI05741.1| 652|Homo sapiens ZNF816A protein protein. 29 5.1
BC105739-1|AAI05740.1| 651|Homo sapiens ZNF816A protein protein. 29 5.1
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 29 5.1
BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type a... 29 5.1
BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein. 29 5.1
BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein. 29 5.1
BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein. 29 5.1
BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein. 29 5.1
BC005211-1|AAH05211.1| 170|Homo sapiens zinc finger, CCHC domai... 29 5.1
BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for IM... 29 5.1
AY314006-1|AAP79899.1| 1817|Homo sapiens DEC-205/DCL-1 fusion pr... 29 5.1
AY184222-1|AAN85434.1| 1873|Homo sapiens DEC-205/DCL-1 fusion pr... 29 5.1
AK000101-1|BAA90946.1| 170|Homo sapiens protein ( Homo sapiens ... 29 5.1
AF064827-1|AAC62622.1| 1722|Homo sapiens gp200-MR6 protein. 29 5.1
AF011333-1|AAC17636.1| 1722|Homo sapiens DEC-205 protein. 29 5.1
AC093873-1|AAY24189.1| 806|Homo sapiens unknown protein. 29 5.1
AB208915-1|BAD92152.1| 1340|Homo sapiens lymphocyte antigen 75 v... 29 5.1
AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein. 29 5.1
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h... 29 6.7
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 29 6.7
M64283-1|AAA52699.1| 453|Homo sapiens heparan sulfate proteogly... 29 6.7
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 29 6.7
AL590103-9|CAI12132.1| 196|Homo sapiens heparan sulfate proteog... 29 6.7
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 29 6.7
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 29 6.7
AK027618-1|BAB55237.1| 849|Homo sapiens protein ( Homo sapiens ... 29 6.7
AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven... 29 8.8
AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven... 29 8.8
AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven... 29 8.8
AF284337-1|AAG14458.1| 221|Homo sapiens SEBOX protein. 29 8.8
AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo ... 29 8.8
>AK054592-1|BAB70769.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 167
Score = 107 bits (258), Expect = 1e-23
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 8/101 (7%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGVCARD------AGFNRQREKCFKCNRTGHFARDCKEE 301
MSS+ C+KC R+GH+AREC GG R GF R+ C++C +GH A+DC +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRDICYRCGESGHLAKDCDLQ 60
Query: 302 ADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 418
D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 EDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 101
Score = 79.8 bits (188), Expect = 4e-15
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 334
CY C + GH AR+C +KC+ C GH +DC + +CYRC TG
Sbjct: 88 CYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDCTKV--KCYRCGETG 134
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNC 418
H+A C+++ E +CY C ++GH+AR C
Sbjct: 135 HVAINCSKT-SEVNCYRCGESGHLAREC 161
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEA 304
CY+C TGH A C++ C++C +GH AR+C EA
Sbjct: 127 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIEA 165
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECT 199
SK S CY+C +GH ARECT
Sbjct: 141 SKTSEVNCYRCGESGHLARECT 162
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 377 CYNCNKTGHIARNCPEG 427
C+ C ++GH AR CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>BC014911-1|AAH14911.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 100 bits (239), Expect = 2e-21
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 11/104 (10%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGG-----VCARDAGF----NRQREKCFKCNRTGHFARDC 292
MSS+ C+KC R+GH+AREC GG + +R GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 293 KEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 418
+ D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 79.8 bits (188), Expect = 4e-15
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 334
CY C + GH AR+C +KC+ C GH +DC + +CYRC TG
Sbjct: 91 CYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDCTKV--KCYRCGETG 137
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNC 418
H+A C+++ E +CY C ++GH+AR C
Sbjct: 138 HVAINCSKT-SEVNCYRCGESGHLAREC 164
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEA 304
CY+C TGH A C++ C++C +GH AR+C EA
Sbjct: 130 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIEA 168
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECT 199
SK S CY+C +GH ARECT
Sbjct: 144 SKTSEVNCYRCGESGHLARECT 165
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 377 CYNCNKTGHIARNCPEG 427
C+ C ++GH AR CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>BC000288-1|AAH00288.1| 170|Homo sapiens CNBP protein protein.
Length = 170
Score = 100 bits (239), Expect = 2e-21
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 11/104 (10%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGG-----VCARDAGF----NRQREKCFKCNRTGHFARDC 292
MSS+ C+KC R+GH+AREC GG + +R GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 293 KEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 418
+ D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 DLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 79.8 bits (188), Expect = 4e-15
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 334
CY C + GH AR+C +KC+ C GH +DC + +CYRC TG
Sbjct: 91 CYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDCTKV--KCYRCGETG 137
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNC 418
H+A C+++ E +CY C ++GH+AR C
Sbjct: 138 HVAINCSKT-SEVNCYRCGESGHLAREC 164
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEA 304
CY+C TGH A C++ C++C +GH AR+C EA
Sbjct: 130 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIEA 168
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECT 199
SK S CY+C +GH ARECT
Sbjct: 144 SKTSEVNCYRCGESGHLARECT 165
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 377 CYNCNKTGHIARNCPEG 427
C+ C ++GH AR CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>DQ092366-1|AAY96754.1| 171|Homo sapiens cellular nucleic acid
binding protein beta variant 1 protein.
Length = 171
Score = 97.1 bits (231), Expect = 2e-20
Identities = 45/105 (42%), Positives = 64/105 (60%), Gaps = 12/105 (11%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQG-----GVCARDAGF----NRQREKCFKCNRTGHFARDC 292
MSS+ C+KC R+GH+AREC G G+ +R GF + + C++C +GH A+DC
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Query: 293 K-EEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 418
+E + CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 DLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 105
Score = 81.8 bits (193), Expect = 9e-16
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE---EADRC-YR 319
+CY+C +GH A++C ++ E C+ C R GH A+DCKE E ++C Y
Sbjct: 46 ICYRCGESGHLAKDCDL-----------QEDEACYNCGRGGHIAKDCKEPKREREQCCYN 94
Query: 320 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 418
C GH+AR+C + DE CY+C + GHI ++C
Sbjct: 95 CGKPGHLARDCDHA-DEQKCYSCGEFGHIQKDC 126
Score = 79.8 bits (188), Expect = 4e-15
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 334
CY C + GH AR+C +KC+ C GH +DC + +CYRC TG
Sbjct: 92 CYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDCTKV--KCYRCGETG 138
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNC 418
H+A C+++ E +CY C ++GH+AR C
Sbjct: 139 HVAINCSKT-SEVNCYRCGESGHLAREC 165
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEA 304
CY+C TGH A C++ C++C +GH AR+C EA
Sbjct: 131 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIEA 169
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECT 199
SK S CY+C +GH ARECT
Sbjct: 145 SKTSEVNCYRCGESGHLARECT 166
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 377 CYNCNKTGHIARNCPEG 427
C+ C ++GH AR CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>U19765-1|AAA91782.1| 177|Homo sapiens nucleic acid binding protein
protein.
Length = 177
Score = 96.3 bits (229), Expect = 4e-20
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 18/111 (16%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGVCARD------AGFNRQR----------EKCFKCNRT 271
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 272 GHFARDCKEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 418
GH A+DC + D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 82.2 bits (194), Expect = 7e-16
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE---EADRC-YR 319
+CY+C +GH A++C + Q + C+ C R GH A+DCKE E ++C Y
Sbjct: 53 ICYRCGESGHLAKDC------------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYN 100
Query: 320 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 418
C GH+AR+C + DE CY+C + GHI ++C
Sbjct: 101 CGKPGHLARDCDHA-DEQKCYSCGEFGHIQKDC 132
Score = 79.8 bits (188), Expect = 4e-15
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 334
CY C + GH AR+C +KC+ C GH +DC + +CYRC TG
Sbjct: 98 CYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDCTKV--KCYRCGETG 144
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNC 418
H+A C+++ E +CY C ++GH+AR C
Sbjct: 145 HVAINCSKT-SEVNCYRCGESGHLAREC 171
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEA 304
CY+C TGH A C++ C++C +GH AR+C EA
Sbjct: 137 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIEA 175
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECT 199
SK S CY+C +GH ARECT
Sbjct: 151 SKTSEVNCYRCGESGHLARECT 172
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 377 CYNCNKTGHIARNCPEG 427
C+ C ++GH AR CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>M28372-1|AAA61975.1| 177|Homo sapiens SRE-binding protein protein.
Length = 177
Score = 96.3 bits (229), Expect = 4e-20
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 18/111 (16%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGVCARD------AGFNRQR----------EKCFKCNRT 271
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 272 GHFARDCKEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 418
GH A+DC + D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 82.2 bits (194), Expect = 7e-16
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE---EADRC-YR 319
+CY+C +GH A++C + Q + C+ C R GH A+DCKE E ++C Y
Sbjct: 53 ICYRCGESGHLAKDC------------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYN 100
Query: 320 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 418
C GH+AR+C + DE CY+C + GHI ++C
Sbjct: 101 CGKPGHLARDCDHA-DEQKCYSCGEFGHIQKDC 132
Score = 79.8 bits (188), Expect = 4e-15
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 334
CY C + GH AR+C +KC+ C GH +DC + +CYRC TG
Sbjct: 98 CYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDCTKV--KCYRCGETG 144
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNC 418
H+A C+++ E +CY C ++GH+AR C
Sbjct: 145 HVAINCSKT-SEVNCYRCGESGHLAREC 171
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEA 304
CY+C TGH A C++ C++C +GH AR+C EA
Sbjct: 137 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIEA 175
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECT 199
SK S CY+C +GH ARECT
Sbjct: 151 SKTSEVNCYRCGESGHLARECT 172
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 377 CYNCNKTGHIARNCPEG 427
C+ C ++GH AR CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>BC093058-1|AAH93058.1| 177|Homo sapiens CCHC-type zinc finger,
nucleic acid binding protein protein.
Length = 177
Score = 96.3 bits (229), Expect = 4e-20
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 18/111 (16%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGVCARD------AGFNRQR----------EKCFKCNRT 271
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 272 GHFARDCKEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 418
GH A+DC + D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 82.2 bits (194), Expect = 7e-16
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE---EADRC-YR 319
+CY+C +GH A++C + Q + C+ C R GH A+DCKE E ++C Y
Sbjct: 53 ICYRCGESGHLAKDC------------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYN 100
Query: 320 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 418
C GH+AR+C + DE CY+C + GHI ++C
Sbjct: 101 CGKPGHLARDCDHA-DEQKCYSCGEFGHIQKDC 132
Score = 79.8 bits (188), Expect = 4e-15
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 334
CY C + GH AR+C +KC+ C GH +DC + +CYRC TG
Sbjct: 98 CYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDCTKV--KCYRCGETG 144
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNC 418
H+A C+++ E +CY C ++GH+AR C
Sbjct: 145 HVAINCSKT-SEVNCYRCGESGHLAREC 171
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEA 304
CY+C TGH A C++ C++C +GH AR+C EA
Sbjct: 137 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIEA 175
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECT 199
SK S CY+C +GH ARECT
Sbjct: 151 SKTSEVNCYRCGESGHLARECT 172
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 377 CYNCNKTGHIARNCPEG 427
C+ C ++GH AR CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>AY329622-1|AAR89462.1| 177|Homo sapiens zinc finger protein 9
protein.
Length = 177
Score = 96.3 bits (229), Expect = 4e-20
Identities = 46/111 (41%), Positives = 61/111 (54%), Gaps = 18/111 (16%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGVCARD------AGFNRQR----------EKCFKCNRT 271
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 272 GHFARDCKEEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 418
GH A+DC + D CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 GHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 82.2 bits (194), Expect = 7e-16
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE---EADRC-YR 319
+CY+C +GH A++C + Q + C+ C R GH A+DCKE E ++C Y
Sbjct: 53 ICYRCGESGHLAKDC------------DLQEDACYNCGRGGHIAKDCKEPKREREQCCYN 100
Query: 320 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 418
C GH+AR+C + DE CY+C + GHI ++C
Sbjct: 101 CGKPGHLARDCDHA-DEQKCYSCGEFGHIQKDC 132
Score = 79.8 bits (188), Expect = 4e-15
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 334
CY C + GH AR+C +KC+ C GH +DC + +CYRC TG
Sbjct: 98 CYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDCTKV--KCYRCGETG 144
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNC 418
H+A C+++ E +CY C ++GH+AR C
Sbjct: 145 HVAINCSKT-SEVNCYRCGESGHLAREC 171
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEA 304
CY+C TGH A C++ C++C +GH AR+C EA
Sbjct: 137 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIEA 175
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECT 199
SK S CY+C +GH ARECT
Sbjct: 151 SKTSEVNCYRCGESGHLARECT 172
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 377 CYNCNKTGHIARNCPEG 427
C+ C ++GH AR CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>DQ091187-1|AAY89856.1| 178|Homo sapiens cellular nucleic acid
binding protein alpha variant 1 protein.
Length = 178
Score = 93.1 bits (221), Expect = 4e-19
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGVCARD------AGFNRQR----------EKCFKCNRT 271
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 272 GHFARDCK-EEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 418
GH A+DC +E + CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 GHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Score = 81.8 bits (193), Expect = 9e-16
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE---EADRC-YR 319
+CY+C +GH A++C ++ E C+ C R GH A+DCKE E ++C Y
Sbjct: 53 ICYRCGESGHLAKDCDL-----------QEDEACYNCGRGGHIAKDCKEPKREREQCCYN 101
Query: 320 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 418
C GH+AR+C + DE CY+C + GHI ++C
Sbjct: 102 CGKPGHLARDCDHA-DEQKCYSCGEFGHIQKDC 133
Score = 79.8 bits (188), Expect = 4e-15
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 334
CY C + GH AR+C +KC+ C GH +DC + +CYRC TG
Sbjct: 99 CYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDCTKV--KCYRCGETG 145
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNC 418
H+A C+++ E +CY C ++GH+AR C
Sbjct: 146 HVAINCSKT-SEVNCYRCGESGHLAREC 172
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEA 304
CY+C TGH A C++ C++C +GH AR+C EA
Sbjct: 138 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIEA 176
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECT 199
SK S CY+C +GH ARECT
Sbjct: 152 SKTSEVNCYRCGESGHLARECT 173
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 377 CYNCNKTGHIARNCPEG 427
C+ C ++GH AR CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>BT019613-1|AAV38419.1| 178|Homo sapiens zinc finger protein 9 (a
cellular retroviral nucleic acid binding protein)
protein.
Length = 178
Score = 93.1 bits (221), Expect = 4e-19
Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 19/112 (16%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGVCARD------AGFNRQR----------EKCFKCNRT 271
MSS+ C+KC R+GH+AREC GG R GF R + C++C +
Sbjct: 1 MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGES 60
Query: 272 GHFARDCK-EEADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNC 418
GH A+DC +E + CY C GHIA++C + E CYNC K GH+AR+C
Sbjct: 61 GHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Score = 81.8 bits (193), Expect = 9e-16
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE---EADRC-YR 319
+CY+C +GH A++C ++ E C+ C R GH A+DCKE E ++C Y
Sbjct: 53 ICYRCGESGHLAKDCDL-----------QEDEACYNCGRGGHIAKDCKEPKREREQCCYN 101
Query: 320 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 418
C GH+AR+C + DE CY+C + GHI ++C
Sbjct: 102 CGKPGHLARDCDHA-DEQKCYSCGEFGHIQKDC 133
Score = 79.8 bits (188), Expect = 4e-15
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 334
CY C + GH AR+C +KC+ C GH +DC + +CYRC TG
Sbjct: 99 CYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDCTKV--KCYRCGETG 145
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNC 418
H+A C+++ E +CY C ++GH+AR C
Sbjct: 146 HVAINCSKT-SEVNCYRCGESGHLAREC 172
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEA 304
CY+C TGH A C++ C++C +GH AR+C EA
Sbjct: 138 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIEA 176
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECT 199
SK S CY+C +GH ARECT
Sbjct: 152 SKTSEVNCYRCGESGHLARECT 173
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 377 CYNCNKTGHIARNCPEG 427
C+ C ++GH AR CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>BC021176-1|AAH21176.1| 166|Homo sapiens zinc finger, CCHC domain
containing 13 protein.
Length = 166
Score = 85.0 bits (201), Expect = 1e-16
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = +2
Query: 149 SVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCN 325
++CY C R+GH A++C +D R R+ C+ C R GH ARDC +++ +CY C
Sbjct: 65 NICYNCGRSGHIAKDC-------KDPKRER-RQHCYTCGRLGHLARDCDRQKEQKCYSCG 116
Query: 326 GTGHIARECAQSPDEPSCYNCNKTGHIARNC 418
GHI ++CAQ CY C + GH+A NC
Sbjct: 117 KLGHIQKDCAQ----VKCYRCGEIGHVAINC 143
Score = 72.9 bits (171), Expect = 4e-13
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKC---------FKCNRTGHFARDC 292
MSS + C +GH+AR C +GG R G + + +C + C +G A++C
Sbjct: 1 MSSKDFFACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNC 60
Query: 293 KEEADRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNC 418
+ CY C +GHIA++C E CY C + GH+AR+C
Sbjct: 61 VLLGNICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDC 104
Score = 72.1 bits (169), Expect = 7e-13
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Frame = +2
Query: 146 SSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCK----EEADRC 313
S CY C +G A+ C G C+ C R+GH A+DCK E C
Sbjct: 44 SYTCYCCGESGRNAKNCVLLG------------NICYNCGRSGHIAKDCKDPKRERRQHC 91
Query: 314 YRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 424
Y C GH+AR+C + ++ CY+C K GHI ++C +
Sbjct: 92 YTCGRLGHLARDCDRQKEQ-KCYSCGKLGHIQKDCAQ 127
>DQ092367-1|AAY96755.1| 172|Homo sapiens cellular nucleic acid
binding protein beta variant 2 protein.
Length = 172
Score = 81.8 bits (193), Expect = 9e-16
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE-EADR---CYR 319
+CY+C +GH A++C E C+ C R GH A+DCKE + +R CY
Sbjct: 46 ICYRCGESGHLAKDCD----------LQEDVEACYNCGRGGHIAKDCKEPKREREQCCYN 95
Query: 320 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 418
C GH+AR+C + DE CY+C + GHI ++C
Sbjct: 96 CGKPGHLARDCDHA-DEQKCYSCGEFGHIQKDC 127
Score = 81.0 bits (191), Expect = 2e-15
Identities = 41/95 (43%), Positives = 55/95 (57%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYR 319
MSS+ C+KC R+GH+AREC GG R G R R + F+ F D CYR
Sbjct: 1 MSSNECFKCGRSGHWARECPTGG--GRGRGM-RSRGRGFQ------FVSSSLP--DICYR 49
Query: 320 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 424
C +GH+A++C D +CYNC + GHIA++C E
Sbjct: 50 CGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKE 84
Score = 79.8 bits (188), Expect = 4e-15
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 334
CY C + GH AR+C +KC+ C GH +DC + +CYRC TG
Sbjct: 93 CYNCGKPGHLARDCDHA-----------DEQKCYSCGEFGHIQKDCTKV--KCYRCGETG 139
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNC 418
H+A C+++ E +CY C ++GH+AR C
Sbjct: 140 HVAINCSKT-SEVNCYRCGESGHLAREC 166
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEA 304
CY+C TGH A C++ C++C +GH AR+C EA
Sbjct: 132 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIEA 170
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECT 199
SK S CY+C +GH ARECT
Sbjct: 146 SKTSEVNCYRCGESGHLARECT 167
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 377 CYNCNKTGHIARNCPEG 427
C+ C ++GH AR CP G
Sbjct: 6 CFKCGRSGHWARECPTG 22
>AY436367-1|AAR11855.1| 54|Homo sapiens cellular nucleic acid
binding protein protein.
Length = 54
Score = 58.0 bits (134), Expect = 1e-08
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +2
Query: 272 GHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 418
GH +DC + +CYRC TGH+A C+++ E +CY C ++GH+AR C
Sbjct: 3 GHIQKDCTKV--KCYRCGETGHVAINCSKT-SEVNCYRCGESGHLAREC 48
Score = 51.2 bits (117), Expect = 1e-06
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +2
Query: 248 KCFKCNRTGHFARDCKEEAD-RCYRCNGTGHIAREC 352
KC++C TGH A +C + ++ CYRC +GH+AREC
Sbjct: 13 KCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 48
Score = 38.7 bits (86), Expect = 0.008
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEA 304
CY+C TGH A C++ C++C +GH AR+C EA
Sbjct: 14 CYRCGETGHVAINCSK-----------TSEVNCYRCGESGHLARECTIEA 52
Score = 35.1 bits (77), Expect = 0.10
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECT 199
SK S CY+C +GH ARECT
Sbjct: 28 SKTSEVNCYRCGESGHLARECT 49
>BC032736-1|AAH32736.1| 271|Homo sapiens ZCCHC9 protein protein.
Length = 271
Score = 54.8 bits (126), Expect = 1e-07
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEAD-- 307
+K ++ VC+ C + GH +C + +D G C++C T H CK + D
Sbjct: 123 AKKNAMVCFHCRKPGHGIADCP-AALENQDMGTGI----CYRCGSTEHEITKCKAKVDPA 177
Query: 308 -------RCYRCNGTGHIARECAQSP-----DEPSCYNCNKTGHIARNCPE 424
+C+ C GH++R C +P D C C H+ ++CPE
Sbjct: 178 LGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE------- 298
M + +CY+C T H +C + V F KCF C GH +R C +
Sbjct: 152 MGTGICYRCGSTEHEITKC-KAKVDPALGEF--PFAKCFVCGEMGHLSRSCPDNPKGLYA 208
Query: 299 EADRCYRCNGTGHIARECAQS 361
+ C C H+ ++C +S
Sbjct: 209 DGGGCKLCGSVEHLKKDCPES 229
>BC014841-1|AAH14841.1| 274|Homo sapiens ZCCHC9 protein protein.
Length = 274
Score = 54.8 bits (126), Expect = 1e-07
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEAD-- 307
+K ++ VC+ C + GH +C + +D G C++C T H CK + D
Sbjct: 123 AKKNAMVCFHCRKPGHGIADCP-AALENQDMGTGI----CYRCGSTEHEITKCKAKVDPA 177
Query: 308 -------RCYRCNGTGHIARECAQSP-----DEPSCYNCNKTGHIARNCPE 424
+C+ C GH++R C +P D C C H+ ++CPE
Sbjct: 178 LGEFPFAKCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCGSVEHLKKDCPE 228
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE------- 298
M + +CY+C T H +C + V F KCF C GH +R C +
Sbjct: 152 MGTGICYRCGSTEHEITKC-KAKVDPALGEF--PFAKCFVCGEMGHLSRSCPDNPKGLYA 208
Query: 299 EADRCYRCNGTGHIARECAQS 361
+ C C H+ ++C +S
Sbjct: 209 DGGGCKLCGSVEHLKKDCPES 229
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 51.2 bits (117), Expect = 1e-06
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
K + DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 123 KPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 165
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGHIAREC 352
++C+ C H A++C + +C+ C H+ C
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 51.2 bits (117), Expect = 1e-06
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
K + DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 123 KPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 165
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGHIAREC 352
++C+ C H A++C + +C+ C H+ C
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 51.2 bits (117), Expect = 1e-06
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
K + DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 100 KPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 142
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGHIAREC 352
++C+ C H A++C + +C+ C H+ C
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 141
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 51.2 bits (117), Expect = 1e-06
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
K + DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 100 KPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 142
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGHIAREC 352
++C+ C H A++C + +C+ C H+ C
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 141
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 51.2 bits (117), Expect = 1e-06
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
K + DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 100 KPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 142
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGHIAREC 352
++C+ C H A++C + +C+ C H+ C
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 141
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 51.2 bits (117), Expect = 1e-06
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
K + DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 100 KPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 142
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGHIAREC 352
++C+ C H A++C + +C+ C H+ C
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 141
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 51.2 bits (117), Expect = 1e-06
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
K + DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 100 KPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 142
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGHIAREC 352
++C+ C H A++C + +C+ C H+ C
Sbjct: 104 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 141
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 51.2 bits (117), Expect = 1e-06
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
K + DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 123 KPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 165
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGHIAREC 352
++C+ C H A++C + +C+ C H+ C
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 51.2 bits (117), Expect = 1e-06
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
K + DRCY C G H A+EC+ P C+ C H+ NCP
Sbjct: 123 KPKGDRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANCP 165
Score = 29.9 bits (64), Expect = 3.8
Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGHIAREC 352
++C+ C H A++C + +C+ C H+ C
Sbjct: 127 DRCYNCGGLDHHAKECSLPPQPKKCHYCQSIMHMVANC 164
>BC107584-1|AAI07585.1| 239|Homo sapiens ZCCHC3 protein protein.
Length = 239
Score = 49.6 bits (113), Expect = 4e-06
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +2
Query: 230 FNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 409
+ Q + CFKC H + C + DRC+RC GH++ C + C C K GH
Sbjct: 164 YKGQPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYCRKG---IVCNLCGKRGHAF 218
Query: 410 RNCPE 424
CP+
Sbjct: 219 AQCPK 223
Score = 35.9 bits (79), Expect = 0.058
Identities = 19/75 (25%), Positives = 30/75 (40%)
Frame = +2
Query: 137 KMSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 316
K C+KC H + CTQ ++CF+C GH + C+ + C
Sbjct: 165 KGQPKTCFKCGSRTHMSGSCTQ--------------DRCFRCGEEGHLSPYCR-KGIVCN 209
Query: 317 RCNGTGHIARECAQS 361
C GH +C ++
Sbjct: 210 LCGKRGHAFAQCPKA 224
Score = 33.9 bits (74), Expect = 0.23
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEG 427
K + C++C H++ C Q C+ C + GH++ C +G
Sbjct: 165 KGQPKTCFKCGSRTHMSGSCTQD----RCFRCGEEGHLSPYCRKG 205
>BC069238-1|AAH69238.1| 403|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 403
Score = 49.6 bits (113), Expect = 4e-06
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +2
Query: 230 FNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 409
+ Q + CFKC H + C + DRC+RC GH++ C + C C K GH
Sbjct: 328 YKGQPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYCRKG---IVCNLCGKRGHAF 382
Query: 410 RNCPE 424
CP+
Sbjct: 383 AQCPK 387
Score = 35.9 bits (79), Expect = 0.058
Identities = 19/75 (25%), Positives = 30/75 (40%)
Frame = +2
Query: 137 KMSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 316
K C+KC H + CTQ ++CF+C GH + C+ + C
Sbjct: 329 KGQPKTCFKCGSRTHMSGSCTQ--------------DRCFRCGEEGHLSPYCR-KGIVCN 373
Query: 317 RCNGTGHIARECAQS 361
C GH +C ++
Sbjct: 374 LCGKRGHAFAQCPKA 388
Score = 33.9 bits (74), Expect = 0.23
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEG 427
K + C++C H++ C Q C+ C + GH++ C +G
Sbjct: 329 KGQPKTCFKCGSRTHMSGSCTQD----RCFRCGEEGHLSPYCRKG 369
>AL034548-4|CAB81631.1| 404|Homo sapiens zinc finger, CCHC domain
containing 3 protein.
Length = 404
Score = 49.6 bits (113), Expect = 4e-06
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +2
Query: 230 FNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 409
+ Q + CFKC H + C + DRC+RC GH++ C + C C K GH
Sbjct: 329 YKGQPKTCFKCGSRTHMSGSCTQ--DRCFRCGEEGHLSPYCRKG---IVCNLCGKRGHAF 383
Query: 410 RNCPE 424
CP+
Sbjct: 384 AQCPK 388
Score = 35.9 bits (79), Expect = 0.058
Identities = 19/75 (25%), Positives = 30/75 (40%)
Frame = +2
Query: 137 KMSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 316
K C+KC H + CTQ ++CF+C GH + C+ + C
Sbjct: 330 KGQPKTCFKCGSRTHMSGSCTQ--------------DRCFRCGEEGHLSPYCR-KGIVCN 374
Query: 317 RCNGTGHIARECAQS 361
C GH +C ++
Sbjct: 375 LCGKRGHAFAQCPKA 389
Score = 33.9 bits (74), Expect = 0.23
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEG 427
K + C++C H++ C Q C+ C + GH++ C +G
Sbjct: 330 KGQPKTCFKCGSRTHMSGSCTQD----RCFRCGEEGHLSPYCRKG 370
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 48.4 bits (110), Expect = 1e-05
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
+ + DRCY C G H A+EC P C+ C H+ +CP
Sbjct: 133 RSKGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASCP 175
Score = 32.7 bits (71), Expect = 0.54
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGHIAREC 352
++C+ C H A++CK + +C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 48.4 bits (110), Expect = 1e-05
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
+ + DRCY C G H A+EC P C+ C H+ +CP
Sbjct: 133 RSKGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASCP 175
Score = 32.7 bits (71), Expect = 0.54
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGHIAREC 352
++C+ C H A++CK + +C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 48.4 bits (110), Expect = 1e-05
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
+ + DRCY C G H A+EC P C+ C H+ +CP
Sbjct: 133 RSKGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASCP 175
Score = 32.7 bits (71), Expect = 0.54
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGHIAREC 352
++C+ C H A++CK + +C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 48.4 bits (110), Expect = 1e-05
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
+ + DRCY C G H A+EC P C+ C H+ +CP
Sbjct: 133 RSKGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASCP 175
Score = 32.7 bits (71), Expect = 0.54
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCK--EEADRCYRCNGTGHIAREC 352
++C+ C H A++CK + +C+ C H+ C
Sbjct: 137 DRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVASC 174
>BC005990-1|AAH05990.1| 405|Homo sapiens Unknown (protein for
IMAGE:4046616) protein.
Length = 405
Score = 41.1 bits (92), Expect = 0.002
Identities = 24/92 (26%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT 331
+C C++ GH ++ C R+ +CF C+R GH C A C C
Sbjct: 242 ICRNCDKRGHLSKNCP----------LPRKVRRCFLCSRRGHLLYSC--PAPLCEYCPVP 289
Query: 332 GHIARECA-QSPDEPSCYNCNKTGHIARNCPE 424
+ R C + + C C+ GH C E
Sbjct: 290 KMLDRSCLFRHSWDKQCDRCHMLGHYTDACTE 321
Score = 40.3 bits (90), Expect = 0.003
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCA---------RDAGFNRQREK-CFKCNRTGHFARDCKEEA 304
C+ C+R GH C +C R F +K C +C+ GH+ C E
Sbjct: 265 CFLCSRRGHLLYSCP-APLCEYCPVPKMLDRSCLFRHSWDKQCDRCHMLGHYTDACTEIW 323
Query: 305 DRCYRCNGTGHIARECAQSPDEPS----CYNCNKTGHIARNCPE 424
+ + G + ++P PS CY+C + GH CPE
Sbjct: 324 RQYHLTTKPGPPKKP--KTPSRPSALAYCYHCAQKGHYGHECPE 365
>BC036940-1|AAH36940.1| 542|Homo sapiens ZCCHC7 protein protein.
Length = 542
Score = 39.1 bits (87), Expect = 0.006
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT 331
+C C++ GH ++ C R+ +CF C+R GH C A C C
Sbjct: 241 ICRNCDKRGHLSKNCP----------LPRKVRRCFLCSRRGHLLYSC--PAPLCEYCPVP 288
Query: 332 GHIARECA-QSPDEPSCYNCNKTGHIARNCPE 424
+ C + + C C+ GH C E
Sbjct: 289 KMLDHSCLFRHSWDKQCDRCHMLGHYTDACTE 320
Score = 38.3 bits (85), Expect = 0.011
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 14/104 (13%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCA---------RDAGFNRQREK-CFKCNRTGHFARDCKEEA 304
C+ C+R GH C +C F +K C +C+ GH+ C E
Sbjct: 264 CFLCSRRGHLLYSCP-APLCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYTDACTEIW 322
Query: 305 DRCYRCNGTGHIARECAQSPDEPS----CYNCNKTGHIARNCPE 424
+ + G + ++P PS CY+C + GH CPE
Sbjct: 323 RQYHLTTKPGPPKKP--KTPSRPSALAYCYHCAQKGHYGHECPE 364
>AL512604-1|CAI12725.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 39.1 bits (87), Expect = 0.006
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT 331
+C C++ GH ++ C R+ +CF C+R GH C A C C
Sbjct: 242 ICRNCDKRGHLSKNCP----------LPRKVRRCFLCSRRGHLLYSC--PAPLCEYCPVP 289
Query: 332 GHIARECA-QSPDEPSCYNCNKTGHIARNCPE 424
+ C + + C C+ GH C E
Sbjct: 290 KMLDHSCLFRHSWDKQCDRCHMLGHYTDACTE 321
Score = 38.3 bits (85), Expect = 0.011
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 14/104 (13%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCA---------RDAGFNRQREK-CFKCNRTGHFARDCKEEA 304
C+ C+R GH C +C F +K C +C+ GH+ C E
Sbjct: 265 CFLCSRRGHLLYSCP-APLCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYTDACTEIW 323
Query: 305 DRCYRCNGTGHIARECAQSPDEPS----CYNCNKTGHIARNCPE 424
+ + G + ++P PS CY+C + GH CPE
Sbjct: 324 RQYHLTTKPGPPKKP--KTPSRPSALAYCYHCAQKGHYGHECPE 365
>AL158155-1|CAI13846.2| 543|Homo sapiens zinc finger, CCHC domain
containing 7 protein.
Length = 543
Score = 39.1 bits (87), Expect = 0.006
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT 331
+C C++ GH ++ C R+ +CF C+R GH C A C C
Sbjct: 242 ICRNCDKRGHLSKNCP----------LPRKVRRCFLCSRRGHLLYSC--PAPLCEYCPVP 289
Query: 332 GHIARECA-QSPDEPSCYNCNKTGHIARNCPE 424
+ C + + C C+ GH C E
Sbjct: 290 KMLDHSCLFRHSWDKQCDRCHMLGHYTDACTE 321
Score = 38.3 bits (85), Expect = 0.011
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 14/104 (13%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCA---------RDAGFNRQREK-CFKCNRTGHFARDCKEEA 304
C+ C+R GH C +C F +K C +C+ GH+ C E
Sbjct: 265 CFLCSRRGHLLYSCP-APLCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYTDACTEIW 323
Query: 305 DRCYRCNGTGHIARECAQSPDEPS----CYNCNKTGHIARNCPE 424
+ + G + ++P PS CY+C + GH CPE
Sbjct: 324 RQYHLTTKPGPPKKP--KTPSRPSALAYCYHCAQKGHYGHECPE 365
>AK074608-1|BAC11087.1| 391|Homo sapiens protein ( Homo sapiens
cDNA FLJ90127 fis, clone HEMBB1000106, weakly similar to
CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
Length = 391
Score = 39.1 bits (87), Expect = 0.006
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT 331
+C C++ GH ++ C R+ +CF C+R GH C A C C
Sbjct: 90 ICRNCDKRGHLSKNCP----------LPRKVRRCFLCSRRGHLLYSC--PAPLCEYCPVP 137
Query: 332 GHIARECA-QSPDEPSCYNCNKTGHIARNCPE 424
+ C + + C C+ GH C E
Sbjct: 138 KMLDHSCLFRHSWDKQCDRCHMLGHYTDACTE 169
Score = 38.3 bits (85), Expect = 0.011
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 14/104 (13%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCA---------RDAGFNRQREK-CFKCNRTGHFARDCKEEA 304
C+ C+R GH C +C F +K C +C+ GH+ C E
Sbjct: 113 CFLCSRRGHLLYSCP-APLCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYTDACTEIW 171
Query: 305 DRCYRCNGTGHIARECAQSPDEPS----CYNCNKTGHIARNCPE 424
+ + G + ++P PS CY+C + GH CPE
Sbjct: 172 RQYHLTTKPGPPKKP--KTPSRPSALAYCYHCAQKGHYGHECPE 213
>AK026264-1|BAB15418.1| 454|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22611 fis, clone HSI04961. ).
Length = 454
Score = 39.1 bits (87), Expect = 0.006
Identities = 23/92 (25%), Positives = 35/92 (38%), Gaps = 1/92 (1%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT 331
+C C++ GH ++ C R+ +CF C+R GH C A C C
Sbjct: 242 ICRNCDKRGHLSKNCP----------LPRKVRRCFLCSRRGHLLYSC--PAPLCEYCPVP 289
Query: 332 GHIARECA-QSPDEPSCYNCNKTGHIARNCPE 424
+ C + + C C+ GH C E
Sbjct: 290 KMLDHSCLFRHSWDKQCDRCHMLGHYTDACTE 321
Score = 38.3 bits (85), Expect = 0.011
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 14/104 (13%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCA---------RDAGFNRQREK-CFKCNRTGHFARDCKEEA 304
C+ C+R GH C +C F +K C +C+ GH+ C E
Sbjct: 265 CFLCSRRGHLLYSCP-APLCEYCPVPKMLDHSCLFRHSWDKQCDRCHMLGHYTDACTEIW 323
Query: 305 DRCYRCNGTGHIARECAQSPDEPS----CYNCNKTGHIARNCPE 424
+ + G + ++P PS CY+C + GH CPE
Sbjct: 324 RQYHLTTKPGPPKKP--KTPSRPSALAYCYHCAQKGHYGHECPE 365
>AF480924-1|AAM81186.1| 622|Homo sapiens gag protein protein.
Length = 622
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGVCARD-AGFNRQREK--CFKCNRTGHFARDC 292
M +C++C R GH REC + ARD G R C +C R H+ +C
Sbjct: 503 MRGRICFRCGREGHLMREC-RAKFPARDRQGIENSRRPGLCPRCRRGNHWVSEC 555
Score = 29.1 bits (62), Expect = 6.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 233 NRQREKCFKCNRTGHFARDCK 295
N + CF+C R GH R+C+
Sbjct: 502 NMRGRICFRCGREGHLMRECR 522
>U79569-1|AAD00321.1| 269|Homo sapiens no arches protein.
Length = 269
Score = 32.7 bits (71), Expect = 0.54
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQG 205
CYKC GH+A CT+G
Sbjct: 245 CYKCGEKGHYANRCTKG 261
>EF191081-1|ABN05292.1| 269|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 269
Score = 32.7 bits (71), Expect = 0.54
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQG 205
CYKC GH+A CT+G
Sbjct: 245 CYKCGEKGHYANRCTKG 261
>CR542161-1|CAG46958.1| 269|Homo sapiens CPSF4 protein.
Length = 269
Score = 32.7 bits (71), Expect = 0.54
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQG 205
CYKC GH+A CT+G
Sbjct: 245 CYKCGEKGHYANRCTKG 261
>BC050738-1|AAH50738.1| 243|Homo sapiens CPSF4 protein protein.
Length = 243
Score = 32.7 bits (71), Expect = 0.54
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQG 205
CYKC GH+A CT+G
Sbjct: 219 CYKCGEKGHYANRCTKG 235
>BC003101-1|AAH03101.1| 244|Homo sapiens cleavage and
polyadenylation specific factor 4, 30kDa protein.
Length = 244
Score = 32.7 bits (71), Expect = 0.54
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQG 205
CYKC GH+A CT+G
Sbjct: 220 CYKCGEKGHYANRCTKG 236
>AK091495-1|BAC03676.1| 212|Homo sapiens protein ( Homo sapiens
cDNA FLJ34176 fis, clone FCBBF3016178. ).
Length = 212
Score = 32.7 bits (71), Expect = 0.54
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 218 RDAGFNRQREKCFKCNRTGHFARDCKE 298
R G N + KC+ C + GHF ++C++
Sbjct: 126 RSQGSNPKVGKCYNCEKPGHFKKECRQ 152
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQ 202
CY C + GHF +EC Q
Sbjct: 137 CYNCEKPGHFKKECRQ 152
Score = 29.9 bits (64), Expect = 3.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 344 RECAQSPDEPSCYNCNKTGHIARNC 418
R +P CYNC K GH + C
Sbjct: 126 RSQGSNPKVGKCYNCEKPGHFKKEC 150
Score = 29.1 bits (62), Expect = 6.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 308 RCYRCNGTGHIARECAQSPDEPSCYN 385
+CY C GH +EC Q + YN
Sbjct: 136 KCYNCEKPGHFKKECRQISVQKGPYN 161
>M14123-2|AAA88031.1| 434|Homo sapiens gag 2 protein protein.
Length = 434
Score = 32.3 bits (70), Expect = 0.72
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 377 CYNCNKTGHIARNCP 421
CYNC + GH+ +NCP
Sbjct: 314 CYNCGQIGHLKKNCP 328
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 155 CYKCNRTGHFAREC---TQGGVCARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 310
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 314 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 369
>D83776-1|BAA12105.1| 1516|Homo sapiens KIAA0191 protein.
Length = 1516
Score = 32.3 bits (70), Expect = 0.72
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQG-GVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT 331
C C + GH+ ++C + + R + + EK + N +RD + D
Sbjct: 1167 CRVCGKIGHYMKDCPKRKSLLFRLKKKDSEEEK--EGNEEEKDSRDVLDPRDL------- 1217
Query: 332 GHIARECAQSPDEPSCYNCNKTGHIARNCPE 424
H R+ + P + C+ C GH+ R CPE
Sbjct: 1218 -HDTRDF-RDPRDLRCFICGDAGHVRRECPE 1246
>DQ058013-1|AAY87451.1| 668|Homo sapiens gag protein.
Length = 668
Score = 32.3 bits (70), Expect = 0.72
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 377 CYNCNKTGHIARNCP 421
CYNC + GH+ +NCP
Sbjct: 545 CYNCGQIGHLKKNCP 559
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = +2
Query: 248 KCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 418
KC+ C + GH ++C + T RE PD C C K H A C
Sbjct: 544 KCYNCGQIGHLKKNCPVLNKQNITIQATTTTGRE---PPD--LCPRCKKGKHWASQC 595
Score = 29.1 bits (62), Expect = 6.7
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Frame = +2
Query: 155 CYKCNRTGHFAREC----TQGGVCARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 310
CY C + GH + C Q R+ + C +C + H+A C+ + D+
Sbjct: 545 CYNCGQIGHLKKNCPVLNKQNITIQATTTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>BC131734-1|AAI31735.1| 1645|Homo sapiens zinc finger, CCHC domain
containing 11 protein.
Length = 1645
Score = 32.3 bits (70), Expect = 0.72
Identities = 21/90 (23%), Positives = 36/90 (40%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTG 334
C C + GH+ ++C + + E+ + N +RD + D
Sbjct: 1295 CRVCGKIGHYMKDCPKRKSSLLFRLKKKDSEEEKEGNEEEKDSRDVLDPRDL-------- 1346
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNCPE 424
H R+ + P + C+ C GH+ R CPE
Sbjct: 1347 HDTRDF-RDPRDLRCFICGDAGHVRRECPE 1375
>AL832323-1|CAD38618.1| 899|Homo sapiens hypothetical protein
protein.
Length = 899
Score = 32.3 bits (70), Expect = 0.72
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQR 244
CY C +GH+A++C Q + A G R R
Sbjct: 854 CYNCGVSGHYAQDCKQSSMEANQQGTYRLR 883
Score = 29.9 bits (64), Expect = 3.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKEEA 304
C+ C +GH+A+DCK+ +
Sbjct: 854 CYNCGVSGHYAQDCKQSS 871
Score = 29.5 bits (63), Expect = 5.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 374 SCYNCNKTGHIARNCPE 424
SCYNC +GH A++C +
Sbjct: 853 SCYNCGVSGHYAQDCKQ 869
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 311 CYRCNGTGHIARECAQSPDE 370
CY C +GH A++C QS E
Sbjct: 854 CYNCGVSGHYAQDCKQSSME 873
>AL138849-1|CAI23476.1| 1644|Homo sapiens zinc finger, CCHC domain
containing 11 protein.
Length = 1644
Score = 32.3 bits (70), Expect = 0.72
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQG-GVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT 331
C C + GH+ ++C + + R + + EK + N +RD + D
Sbjct: 1295 CRVCGKIGHYMKDCPKRKSLLFRLKKKDSEEEK--EGNEEEKDSRDVLDPRDL------- 1345
Query: 332 GHIARECAQSPDEPSCYNCNKTGHIARNCPE 424
H R+ + P + C+ C GH+ R CPE
Sbjct: 1346 -HDTRDF-RDPRDLRCFICGDAGHVRRECPE 1374
>AK127846-1|BAC87158.1| 483|Homo sapiens protein ( Homo sapiens
cDNA FLJ45949 fis, clone PLACE7007973. ).
Length = 483
Score = 32.3 bits (70), Expect = 0.72
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = +2
Query: 311 CYRCNGTGHIARECAQSP--DEP--SCYNCNKTGHIARNCPE 424
CY+C GH C P ++P +C C K + NCPE
Sbjct: 437 CYQCGKPGHWKANCPYGPRGEKPCTACPLCRKLRYWKENCPE 478
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +2
Query: 350 CAQSPDEPSCYNCNKTGHIARNCPEG 427
C + +CY C K GH NCP G
Sbjct: 428 CPKDTFPGNCYQCGKPGHWKANCPYG 453
>AK000288-1|BAA91057.1| 298|Homo sapiens protein ( Homo sapiens
cDNA FLJ20281 fis, clone HEP03769. ).
Length = 298
Score = 32.3 bits (70), Expect = 0.72
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQR 244
CY C +GH+A++C Q + A G R R
Sbjct: 253 CYNCGVSGHYAQDCKQSSMEANQQGTYRLR 282
Score = 29.9 bits (64), Expect = 3.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKEEA 304
C+ C +GH+A+DCK+ +
Sbjct: 253 CYNCGVSGHYAQDCKQSS 270
Score = 29.5 bits (63), Expect = 5.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 374 SCYNCNKTGHIARNCPE 424
SCYNC +GH A++C +
Sbjct: 252 SCYNCGVSGHYAQDCKQ 268
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 311 CYRCNGTGHIARECAQSPDE 370
CY C +GH A++C QS E
Sbjct: 253 CYNCGVSGHYAQDCKQSSME 272
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 32.3 bits (70), Expect = 0.72
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 377 CYNCNKTGHIARNCP 421
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 155 CYKCNRTGHFAREC---TQGGVCARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 310
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 32.3 bits (70), Expect = 0.72
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 377 CYNCNKTGHIARNCP 421
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 155 CYKCNRTGHFAREC---TQGGVCARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 310
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 32.3 bits (70), Expect = 0.72
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 377 CYNCNKTGHIARNCP 421
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 155 CYKCNRTGHFAREC---TQGGVCARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 310
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 32.3 bits (70), Expect = 0.72
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 377 CYNCNKTGHIARNCP 421
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 155 CYKCNRTGHFAREC---TQGGVCARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 310
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 32.3 bits (70), Expect = 0.72
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 377 CYNCNKTGHIARNCP 421
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 155 CYKCNRTGHFAREC---TQGGVCARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 310
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF074086-5|AAD21095.2| 666|Homo sapiens gag protein.
Length = 666
Score = 32.3 bits (70), Expect = 0.72
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 377 CYNCNKTGHIARNCP 421
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 155 CYKCNRTGHFAREC---TQGGVCARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 310
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AF074086-1|AAF88165.1| 666|Homo sapiens gag protein protein.
Length = 666
Score = 32.3 bits (70), Expect = 0.72
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2
Query: 377 CYNCNKTGHIARNCP 421
CYNC + GH+ +NCP
Sbjct: 546 CYNCGQIGHLKKNCP 560
Score = 31.1 bits (67), Expect = 1.7
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 155 CYKCNRTGHFAREC---TQGGVCARDAGFNRQ-REKCFKCNRTGHFARDCKEEADR 310
CY C + GH + C + + + R+ + C +C + H+A C+ + D+
Sbjct: 546 CYNCGQIGHLKKNCPVLNKQNITIQATTTGREPPDLCPRCKKGKHWASQCRSKFDK 601
>AB051531-1|BAB21835.1| 855|Homo sapiens KIAA1744 protein protein.
Length = 855
Score = 32.3 bits (70), Expect = 0.72
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQR 244
CY C +GH+A++C Q + A G R R
Sbjct: 810 CYNCGVSGHYAQDCKQSSMEANQQGTYRLR 839
Score = 29.9 bits (64), Expect = 3.8
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKEEA 304
C+ C +GH+A+DCK+ +
Sbjct: 810 CYNCGVSGHYAQDCKQSS 827
Score = 29.5 bits (63), Expect = 5.1
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 374 SCYNCNKTGHIARNCPE 424
SCYNC +GH A++C +
Sbjct: 809 SCYNCGVSGHYAQDCKQ 825
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 311 CYRCNGTGHIARECAQSPDE 370
CY C +GH A++C QS E
Sbjct: 810 CYNCGVSGHYAQDCKQSSME 829
>AL513320-1|CAI14334.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = -2
Query: 335 APCHYICSNGQPPPCSRAQSARCGCT*STSPAAG*SQRRGRIRHLACTRGRSAPSC---C 165
A CH CS C A + C C A +R G +L C RG+ PSC C
Sbjct: 1107 AACHLECSCHNNSTCEPA-TGTCRCGPGFYGQACEHRRSGATCNLDCRRGQFGPSCTLHC 1165
Query: 164 TC 159
C
Sbjct: 1166 DC 1167
>AL512413-3|CAH70834.1| 1229|Homo sapiens multiple EGF-like-domains 6
protein.
Length = 1229
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = -2
Query: 335 APCHYICSNGQPPPCSRAQSARCGCT*STSPAAG*SQRRGRIRHLACTRGRSAPSC---C 165
A CH CS C A + C C A +R G +L C RG+ PSC C
Sbjct: 1107 AACHLECSCHNNSTCEPA-TGTCRCGPGFYGQACEHRRSGATCNLDCRRGQFGPSCTLHC 1165
Query: 164 TC 159
C
Sbjct: 1166 DC 1167
>AB011539-1|BAA32467.2| 1246|Homo sapiens MEGF6 protein.
Length = 1246
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = -2
Query: 335 APCHYICSNGQPPPCSRAQSARCGCT*STSPAAG*SQRRGRIRHLACTRGRSAPSC---C 165
A CH CS C A + C C A +R G +L C RG+ PSC C
Sbjct: 1124 AACHLECSCHNNSTCEPA-TGTCRCGPGFYGQACEHRRSGATCNLDCRRGQFGPSCTLHC 1182
Query: 164 TC 159
C
Sbjct: 1183 DC 1184
>AK128465-1|BAC87453.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ46608 fis, clone TKIDN2003396, weakly similar
to Homo sapiens paternally expressed 10 (PEG10). ).
Length = 310
Score = 31.1 bits (67), Expect = 1.7
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 236 RQREKCFKCNRTGHFARDCKEEADRC-YRCNGTGH 337
++ + C C+++GHF RDC + R N T H
Sbjct: 275 QETQLCLYCSQSGHFTRDCLAKRSRAPATTNNTAH 309
>U89505-1|AAC51293.1| 366|Homo sapiens Hlark protein.
Length = 366
Score = 30.7 bits (66), Expect = 2.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 365 DEPSCYNCNKTGHIARNCP 421
D+ CY C K GH ++ CP
Sbjct: 158 DQSGCYRCGKEGHWSKECP 176
Score = 28.7 bits (61), Expect = 8.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 149 SVCYKCNRTGHFAREC 196
S CY+C + GH+++EC
Sbjct: 160 SGCYRCGKEGHWSKEC 175
>M80482-1|AAA59998.1| 969|Homo sapiens subtilisin-like protease
protein.
Length = 969
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQGGVCARDAGF--NRQREKCFKCNRTGHFARDCKEEAD 307
S +++ C C R G + + V AGF + ++ C KC+ + + C +E +
Sbjct: 757 SSRAATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPE 812
Query: 308 RCYRCNGTGHIARECAQSPDEPSCY 382
+C C +AR EP Y
Sbjct: 813 KCTVCKEGFSLARGSCIPDCEPGTY 837
>D87995-1|BAA21793.1| 956|Homo sapiens PACE4A-II protein.
Length = 956
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQGGVCARDAGF--NRQREKCFKCNRTGHFARDCKEEAD 307
S +++ C C R G + + V AGF + ++ C KC+ + + C +E +
Sbjct: 744 SSRAATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPE 799
Query: 308 RCYRCNGTGHIARECAQSPDEPSCY 382
+C C +AR EP Y
Sbjct: 800 KCTVCKEGFSLARGSCIPDCEPGTY 824
>D87994-1|BAA21792.1| 962|Homo sapiens PACE4E-II protein.
Length = 962
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQGGVCARDAGF--NRQREKCFKCNRTGHFARDCKEEAD 307
S +++ C C R G + + V AGF + ++ C KC+ + + C +E +
Sbjct: 744 SSRAATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPE 799
Query: 308 RCYRCNGTGHIARECAQSPDEPSCY 382
+C C +AR EP Y
Sbjct: 800 KCTVCKEGFSLARGSCIPDCEPGTY 824
>D87993-1|BAA21791.1| 975|Homo sapiens PACE4E-I protein.
Length = 975
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQGGVCARDAGF--NRQREKCFKCNRTGHFARDCKEEAD 307
S +++ C C R G + + V AGF + ++ C KC+ + + C +E +
Sbjct: 757 SSRAATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPE 812
Query: 308 RCYRCNGTGHIARECAQSPDEPSCY 382
+C C +AR EP Y
Sbjct: 813 KCTVCKEGFSLARGSCIPDCEPGTY 837
>BC101478-1|AAI01479.1| 949|Homo sapiens zinc finger, CCHC domain
containing 14 protein.
Length = 949
Score = 30.7 bits (66), Expect = 2.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 374 SCYNCNKTGHIARNCPE 424
SCYNC TGH A++C +
Sbjct: 907 SCYNCGATGHRAQDCKQ 923
Score = 29.5 bits (63), Expect = 5.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKE 298
C+ C TGH A+DCK+
Sbjct: 908 CYNCGATGHRAQDCKQ 923
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 137 KMSSSVCYKCNRTGHFARECTQ 202
K + CY C TGH A++C Q
Sbjct: 902 KSGNLSCYNCGATGHRAQDCKQ 923
Score = 28.7 bits (61), Expect = 8.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 311 CYRCNGTGHIARECAQ 358
CY C TGH A++C Q
Sbjct: 908 CYNCGATGHRAQDCKQ 923
>BC032735-1|AAH32735.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 30.7 bits (66), Expect = 2.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 365 DEPSCYNCNKTGHIARNCP 421
D+ CY C K GH ++ CP
Sbjct: 158 DQSGCYRCGKEGHWSKECP 176
Score = 28.7 bits (61), Expect = 8.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 149 SVCYKCNRTGHFAREC 196
S CY+C + GH+++EC
Sbjct: 160 SGCYRCGKEGHWSKEC 175
>BC004951-1|AAH04951.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 30.7 bits (66), Expect = 2.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 365 DEPSCYNCNKTGHIARNCP 421
D+ CY C K GH ++ CP
Sbjct: 158 DQSGCYRCGKEGHWSKECP 176
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 149 SVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRT 271
S CY+C + GH+++EC R A F Q + + RT
Sbjct: 160 SGCYRCGKEGHWSKECPVDRT-GRVADFTEQYNEQYGAVRT 199
>BC003503-1|AAH03503.1| 359|Homo sapiens RNA binding motif protein
4B protein.
Length = 359
Score = 30.7 bits (66), Expect = 2.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 365 DEPSCYNCNKTGHIARNCP 421
D+ CY C K GH ++ CP
Sbjct: 158 DQSGCYRCGKEGHWSKECP 176
Score = 29.9 bits (64), Expect = 3.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 149 SVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRT 271
S CY+C + GH+++EC R A F Q + + RT
Sbjct: 160 SGCYRCGKEGHWSKECPVDRT-GRVADFTEQYNEQYGAVRT 199
>BC000307-1|AAH00307.1| 364|Homo sapiens RNA binding motif protein
4 protein.
Length = 364
Score = 30.7 bits (66), Expect = 2.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 365 DEPSCYNCNKTGHIARNCP 421
D+ CY C K GH ++ CP
Sbjct: 158 DQSGCYRCGKEGHWSKECP 176
Score = 28.7 bits (61), Expect = 8.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 149 SVCYKCNRTGHFAREC 196
S CY+C + GH+++EC
Sbjct: 160 SGCYRCGKEGHWSKEC 175
>BC000218-1|AAH00218.1| 618|Homo sapiens delta-like 3 (Drosophila)
protein.
Length = 618
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +2
Query: 188 RECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRC 313
R C GG C G +R C C G RDC+E AD C
Sbjct: 398 RACANGGTCVEGGGAHR----C-SC-ALGFGGRDCRERADPC 433
>AL117532-1|CAB55981.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 30.7 bits (66), Expect = 2.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 374 SCYNCNKTGHIARNCPE 424
SCYNC TGH A++C +
Sbjct: 790 SCYNCGATGHRAQDCKQ 806
Score = 29.5 bits (63), Expect = 5.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKE 298
C+ C TGH A+DCK+
Sbjct: 791 CYNCGATGHRAQDCKQ 806
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 137 KMSSSVCYKCNRTGHFARECTQ 202
K + CY C TGH A++C Q
Sbjct: 785 KSGNLSCYNCGATGHRAQDCKQ 806
Score = 28.7 bits (61), Expect = 8.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 311 CYRCNGTGHIARECAQ 358
CY C TGH A++C Q
Sbjct: 791 CYNCGATGHRAQDCKQ 806
>AK075302-1|BAC11535.1| 587|Homo sapiens protein ( Homo sapiens
cDNA FLJ90821 fis, clone Y79AA1001328, highly similar to
Delta-like protein 3 precursor. ).
Length = 587
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +2
Query: 188 RECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRC 313
R C GG C G +R C C G RDC+E AD C
Sbjct: 398 RACANGGTCVEGGGAHR----C-SC-ALGFGGRDCRERADPC 433
>AF241373-1|AAF62542.1| 618|Homo sapiens DLL3 protein precursor
protein.
Length = 618
Score = 30.7 bits (66), Expect = 2.2
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +2
Query: 188 RECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRC 313
R C GG C G +R C C G RDC+E AD C
Sbjct: 398 RACANGGTCVEGGGAHR----C-SC-ALGFGGRDCRERADPC 433
>AB208955-1|BAD92192.1| 800|Homo sapiens paired basic amino acid
cleaving system 4 isoform a preproprotein variant
protein.
Length = 800
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQGGVCARDAGF--NRQREKCFKCNRTGHFARDCKEEAD 307
S +++ C C R G + + V AGF + ++ C KC+ + + C +E +
Sbjct: 588 SSRAATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPE 643
Query: 308 RCYRCNGTGHIARECAQSPDEPSCY 382
+C C +AR EP Y
Sbjct: 644 KCTVCKEGFSLARGSCIPDCEPGTY 668
>AB030243-1|BAB83129.1| 949|Homo sapiens BDG-29 protein.
Length = 949
Score = 30.7 bits (66), Expect = 2.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 374 SCYNCNKTGHIARNCPE 424
SCYNC TGH A++C +
Sbjct: 907 SCYNCGATGHRAQDCKQ 923
Score = 29.5 bits (63), Expect = 5.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKE 298
C+ C TGH A+DCK+
Sbjct: 908 CYNCGATGHRAQDCKQ 923
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 137 KMSSSVCYKCNRTGHFARECTQ 202
K + CY C TGH A++C Q
Sbjct: 902 KSGNLSCYNCGATGHRAQDCKQ 923
Score = 28.7 bits (61), Expect = 8.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 311 CYRCNGTGHIARECAQ 358
CY C TGH A++C Q
Sbjct: 908 CYNCGATGHRAQDCKQ 923
>AB011151-1|BAA25505.2| 910|Homo sapiens KIAA0579 protein protein.
Length = 910
Score = 30.7 bits (66), Expect = 2.2
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 374 SCYNCNKTGHIARNCPE 424
SCYNC TGH A++C +
Sbjct: 868 SCYNCGATGHRAQDCKQ 884
Score = 29.5 bits (63), Expect = 5.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKE 298
C+ C TGH A+DCK+
Sbjct: 869 CYNCGATGHRAQDCKQ 884
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 137 KMSSSVCYKCNRTGHFARECTQ 202
K + CY C TGH A++C Q
Sbjct: 863 KSGNLSCYNCGATGHRAQDCKQ 884
Score = 28.7 bits (61), Expect = 8.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 311 CYRCNGTGHIARECAQ 358
CY C TGH A++C Q
Sbjct: 869 CYNCGATGHRAQDCKQ 884
>AB001914-4|BAA21627.1| 975|Homo sapiens PACE4E-I protein.
Length = 975
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQGGVCARDAGF--NRQREKCFKCNRTGHFARDCKEEAD 307
S +++ C C R G + + V AGF + ++ C KC+ + + C +E +
Sbjct: 757 SSRAATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPE 812
Query: 308 RCYRCNGTGHIARECAQSPDEPSCY 382
+C C +AR EP Y
Sbjct: 813 KCTVCKEGFSLARGSCIPDCEPGTY 837
>AB001914-3|BAA21626.1| 962|Homo sapiens PACE4E-II protein.
Length = 962
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQGGVCARDAGF--NRQREKCFKCNRTGHFARDCKEEAD 307
S +++ C C R G + + V AGF + ++ C KC+ + + C +E +
Sbjct: 744 SSRAATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPE 799
Query: 308 RCYRCNGTGHIARECAQSPDEPSCY 382
+C C +AR EP Y
Sbjct: 800 KCTVCKEGFSLARGSCIPDCEPGTY 824
>AB001914-2|BAA21625.1| 956|Homo sapiens PACE4A-II protein.
Length = 956
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQGGVCARDAGF--NRQREKCFKCNRTGHFARDCKEEAD 307
S +++ C C R G + + V AGF + ++ C KC+ + + C +E +
Sbjct: 744 SSRAATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPE 799
Query: 308 RCYRCNGTGHIARECAQSPDEPSCY 382
+C C +AR EP Y
Sbjct: 800 KCTVCKEGFSLARGSCIPDCEPGTY 824
>AB001914-1|BAA21624.1| 969|Homo sapiens PACE4A-I protein.
Length = 969
Score = 30.7 bits (66), Expect = 2.2
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQGGVCARDAGF--NRQREKCFKCNRTGHFARDCKEEAD 307
S +++ C C R G + + V AGF + ++ C KC+ + + C +E +
Sbjct: 757 SSRAATQCLSCRR-GFYHHQEMNTCVTLCPAGFYADESQKNCLKCHPS---CKKCVDEPE 812
Query: 308 RCYRCNGTGHIARECAQSPDEPSCY 382
+C C +AR EP Y
Sbjct: 813 KCTVCKEGFSLARGSCIPDCEPGTY 837
>BC063524-1|AAH63524.1| 919|Homo sapiens RBBP6 protein protein.
Length = 919
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 362 PDEPSCYNCNKTGHIARNCP 421
P +C+ C K GH +NCP
Sbjct: 156 PPSYTCFRCGKPGHYIKNCP 175
Score = 28.7 bits (61), Expect = 8.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKEEADR 310
CF+C + GH+ ++C D+
Sbjct: 161 CFRCGKPGHYIKNCPTNGDK 180
>AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular
protein PACT protein.
Length = 1625
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 362 PDEPSCYNCNKTGHIARNCP 421
P +C+ C K GH +NCP
Sbjct: 23 PPSYTCFRCGKPGHYIKNCP 42
Score = 28.7 bits (61), Expect = 8.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKEEADR 310
CF+C + GH+ ++C D+
Sbjct: 28 CFRCGKPGHYIKNCPTNGDK 47
>AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding
protein 6 isoform 2 protein.
Length = 1758
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 362 PDEPSCYNCNKTGHIARNCP 421
P +C+ C K GH +NCP
Sbjct: 156 PPSYTCFRCGKPGHYIKNCP 175
Score = 28.7 bits (61), Expect = 8.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKEEADR 310
CF+C + GH+ ++C D+
Sbjct: 161 CFRCGKPGHYIKNCPTNGDK 180
>AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding
protein 6 isoform 1 protein.
Length = 1792
Score = 30.3 bits (65), Expect = 2.9
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 362 PDEPSCYNCNKTGHIARNCP 421
P +C+ C K GH +NCP
Sbjct: 156 PPSYTCFRCGKPGHYIKNCP 175
Score = 28.7 bits (61), Expect = 8.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKEEADR 310
CF+C + GH+ ++C D+
Sbjct: 161 CFRCGKPGHYIKNCPTNGDK 180
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 311 CYRCNGTGHIARECA-QSPDEP 373
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 311 CYRCNGTGHIARECA-QSPDEP 373
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 311 CYRCNGTGHIARECA-QSPDEP 373
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>L49345-1|AAB03514.1| 571|Homo sapiens transcription factor ZFM1
protein.
Length = 571
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 311 CYRCNGTGHIARECA-QSPDEP 373
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 311 CYRCNGTGHIARECA-QSPDEP 373
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternatively
spliced product protein.
Length = 548
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 311 CYRCNGTGHIARECA-QSPDEP 373
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>BC105930-1|AAI05931.1| 651|Homo sapiens ZNF816A protein protein.
Length = 651
Score = 29.5 bits (63), Expect = 5.1
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQ-GGVCARDAGFNRQR-----EKCFKCNRTGH-FARDC 292
++MSS VC++ TG +C + G + + R EK +KCN G F R+
Sbjct: 295 TQMSSLVCHRRLHTGEKPYKCNECGKTFSEKSSLRCHRRLHTGEKPYKCNECGKTFGRNS 354
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 403
+ + EC ++ + S C+ H
Sbjct: 355 ALVIHKAIHTGEKPYKCNECGKTFSQKSSLQCHHILH 391
>BC105740-1|AAI05741.1| 652|Homo sapiens ZNF816A protein protein.
Length = 652
Score = 29.5 bits (63), Expect = 5.1
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQ-GGVCARDAGFNRQR-----EKCFKCNRTGH-FARDC 292
++MSS VC++ TG +C + G + + R EK +KCN G F R+
Sbjct: 296 TQMSSLVCHRRLHTGEKPYKCNECGKTFSEKSSLRCHRRLHTGEKPYKCNECGKTFGRNS 355
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 403
+ + EC ++ + S C+ H
Sbjct: 356 ALVIHKAIHTGEKPYKCNECGKTFSQKSSLQCHHILH 392
>BC105739-1|AAI05740.1| 651|Homo sapiens ZNF816A protein protein.
Length = 651
Score = 29.5 bits (63), Expect = 5.1
Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 7/97 (7%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQ-GGVCARDAGFNRQR-----EKCFKCNRTGH-FARDC 292
++MSS VC++ TG +C + G + + R EK +KCN G F R+
Sbjct: 295 TQMSSLVCHRRLHTGEKPYKCNECGKTFSEKSSLRCHRRLHTGEKPYKCNECGKTFGRNS 354
Query: 293 KEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 403
+ + EC ++ + S C+ H
Sbjct: 355 ALVIHKAIHTGEKPYKCNECGKTFSQKSSLQCHHILH 391
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 311 CYRCNGTGHIARECA-QSPDEP 373
C +C G GHIA +C Q P +P
Sbjct: 404 CTKCGGAGHIASDCKFQRPGDP 425
>BC022543-1|AAH22543.1| 217|Homo sapiens zinc finger CCHC-type and
RNA binding motif 1 protein.
Length = 217
Score = 29.5 bits (63), Expect = 5.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 365 DEPSCYNCNKTGHIARNCPE 424
D+ CY C ++GH++ CP+
Sbjct: 103 DKSKCYECGESGHLSYACPK 122
>BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 311 CYRCNGTGHIARECA-QSPDEP 373
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>BC010177-1|AAH10177.1| 140|Homo sapiens ZCRB1 protein protein.
Length = 140
Score = 29.5 bits (63), Expect = 5.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 365 DEPSCYNCNKTGHIARNCPE 424
D+ CY C ++GH++ CP+
Sbjct: 103 DKSKCYECGESGHLSYACPK 122
>BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 311 CYRCNGTGHIARECA-QSPDEP 373
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 311 CYRCNGTGHIARECA-QSPDEP 373
C +C G GHIA +C Q P +P
Sbjct: 279 CTKCGGAGHIASDCKFQRPGDP 300
>BC005211-1|AAH05211.1| 170|Homo sapiens zinc finger, CCHC domain
containing 10 protein.
Length = 170
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 209 VCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIAR 346
+ R A N+Q +C KC GH+ +C + +R + T + +
Sbjct: 9 IARRQAEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAELKK 54
>BC005099-1|AAH05099.1| 141|Homo sapiens Unknown (protein for
IMAGE:3609027) protein.
Length = 141
Score = 29.5 bits (63), Expect = 5.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 365 DEPSCYNCNKTGHIARNCPE 424
D+ CY C ++GH++ CP+
Sbjct: 103 DKSKCYECGESGHLSYACPK 122
>AY314006-1|AAP79899.1| 1817|Homo sapiens DEC-205/DCL-1 fusion
protein variant V33-2 protein.
Length = 1817
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 158 YKCNRTGHFARECTQGGVCARDAGFNRQREKCFK 259
Y C R G + + +C D G+ R E C+K
Sbjct: 483 YVCKRKGEKLNDASSDKMCPPDEGWKRHGETCYK 516
>AY184222-1|AAN85434.1| 1873|Homo sapiens DEC-205/DCL-1 fusion
protein variant V34-2 protein.
Length = 1873
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 158 YKCNRTGHFARECTQGGVCARDAGFNRQREKCFK 259
Y C R G + + +C D G+ R E C+K
Sbjct: 483 YVCKRKGEKLNDASSDKMCPPDEGWKRHGETCYK 516
>AK000101-1|BAA90946.1| 170|Homo sapiens protein ( Homo sapiens
cDNA FLJ20094 fis, clone COL04320. ).
Length = 170
Score = 29.5 bits (63), Expect = 5.1
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 209 VCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIAR 346
+ R A N+Q +C KC GH+ +C + +R + T + +
Sbjct: 9 IARRQAEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAELKK 54
>AF064827-1|AAC62622.1| 1722|Homo sapiens gp200-MR6 protein.
Length = 1722
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 158 YKCNRTGHFARECTQGGVCARDAGFNRQREKCFK 259
Y C R G + + +C D G+ R E C+K
Sbjct: 483 YVCKRKGEKLNDASSDKMCPPDEGWKRHGETCYK 516
>AF011333-1|AAC17636.1| 1722|Homo sapiens DEC-205 protein.
Length = 1722
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 158 YKCNRTGHFARECTQGGVCARDAGFNRQREKCFK 259
Y C R G + + +C D G+ R E C+K
Sbjct: 483 YVCKRKGEKLNDASSDKMCPPDEGWKRHGETCYK 516
>AC093873-1|AAY24189.1| 806|Homo sapiens unknown protein.
Length = 806
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 158 YKCNRTGHFARECTQGGVCARDAGFNRQREKCFK 259
Y C R G + + +C D G+ R E C+K
Sbjct: 483 YVCKRKGEKLNDASSDKMCPPDEGWKRHGETCYK 516
>AB208915-1|BAD92152.1| 1340|Homo sapiens lymphocyte antigen 75
variant protein.
Length = 1340
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 158 YKCNRTGHFARECTQGGVCARDAGFNRQREKCFK 259
Y C R G + + +C D G+ R E C+K
Sbjct: 101 YVCKRKGEKLNDASSDKMCPPDEGWKRHGETCYK 134
>AB062361-1|BAB56132.1| 217|Homo sapiens ZCRB1 protein protein.
Length = 217
Score = 29.5 bits (63), Expect = 5.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 365 DEPSCYNCNKTGHIARNCPE 424
D+ CY C ++GH++ CP+
Sbjct: 103 DKSKCYECGESGHLSYACPK 122
>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
heparan sulfate proteoglycan core protein protein.
Length = 4393
Score = 29.1 bits (62), Expect = 6.7
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRT--GHFARDCKEEADRC--YRC 322
C +C+ GH + G C + + + +C +C G R ++ C Y
Sbjct: 1158 CERCSCHGHSEACEPETGAC-QGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGD 1216
Query: 323 NGTGHIARECAQSPD-EPSCYNCNKTGHIARNC 418
G A C D P+C C+ GH R+C
Sbjct: 1217 PAAGQAAHTCFLDTDGHPTCDACSP-GHSGRHC 1248
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 29.1 bits (62), Expect = 6.7
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRT--GHFARDCKEEADRC--YRC 322
C +C+ GH + G C + + + +C +C G R ++ C Y
Sbjct: 1156 CERCSCHGHSEACEPETGAC-QGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGD 1214
Query: 323 NGTGHIARECAQSPD-EPSCYNCNKTGHIARNC 418
G A C D P+C C+ GH R+C
Sbjct: 1215 PAAGQAAHTCFLDTDGHPTCDACSP-GHSGRHC 1246
>M64283-1|AAA52699.1| 453|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 453
Score = 29.1 bits (62), Expect = 6.7
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRT--GHFARDCKEEADRC--YRC 322
C +C+ GH + G C + + + +C +C G R ++ C Y
Sbjct: 139 CERCSCHGHSEACEPETGAC-QGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGD 197
Query: 323 NGTGHIARECAQSPD-EPSCYNCNKTGHIARNC 418
G A C D P+C C+ GH R+C
Sbjct: 198 PAAGQAAHTCFLDTDGHPTCDACSP-GHSGRHC 229
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 29.1 bits (62), Expect = 6.7
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRT--GHFARDCKEEADRC--YRC 322
C +C+ GH + G C + + + +C +C G R ++ C Y
Sbjct: 1156 CERCSCHGHSEACEPETGAC-QGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGD 1214
Query: 323 NGTGHIARECAQSPD-EPSCYNCNKTGHIARNC 418
G A C D P+C C+ GH R+C
Sbjct: 1215 PAAGQAAHTCFLDTDGHPTCDACSP-GHSGRHC 1246
>AL590103-9|CAI12132.1| 196|Homo sapiens heparan sulfate
proteoglycan 2 protein.
Length = 196
Score = 29.1 bits (62), Expect = 6.7
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRT--GHFARDCKEEADRC--YRC 322
C +C+ GH + G C + + + +C +C G R ++ C Y
Sbjct: 10 CERCSCHGHSEACEPETGAC-QGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGD 68
Query: 323 NGTGHIARECAQSPD-EPSCYNCNKTGHIARNC 418
G A C D P+C C+ GH R+C
Sbjct: 69 PAAGQAAHTCFLDTDGHPTCDACSP-GHSGRHC 100
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 29.1 bits (62), Expect = 6.7
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRT--GHFARDCKEEADRC--YRC 322
C +C+ GH + G C + + + +C +C G R ++ C Y
Sbjct: 1156 CERCSCHGHSEACEPETGAC-QGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGD 1214
Query: 323 NGTGHIARECAQSPD-EPSCYNCNKTGHIARNC 418
G A C D P+C C+ GH R+C
Sbjct: 1215 PAAGQAAHTCFLDTDGHPTCDACSP-GHSGRHC 1246
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteoglycan
perlecan protein.
Length = 4370
Score = 29.1 bits (62), Expect = 6.7
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRT--GHFARDCKEEADRC--YRC 322
C +C+ GH + G C + + + +C +C G R ++ C Y
Sbjct: 1135 CERCSCHGHSEACEPETGAC-QGCQHHTEGPRCEQCQPGYYGDAQRGTPQDCQLCPCYGD 1193
Query: 323 NGTGHIARECAQSPD-EPSCYNCNKTGHIARNC 418
G A C D P+C C+ GH R+C
Sbjct: 1194 PAAGQAAHTCFLDTDGHPTCDACSP-GHSGRHC 1225
>AK027618-1|BAB55237.1| 849|Homo sapiens protein ( Homo sapiens
cDNA FLJ14712 fis, clone NT2RP3000825, weakly similar to
NEUROGENIC LOCUS NOTCH 3 PROTEIN. ).
Length = 849
Score = 29.1 bits (62), Expect = 6.7
Identities = 26/91 (28%), Positives = 32/91 (35%), Gaps = 3/91 (3%)
Frame = +2
Query: 164 CNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIA 343
CN C G +C GF R + CNR C D C +C G
Sbjct: 621 CNPPCQHGGICLAGNLCTCPYGFVGPRCETMVCNRHCENGGQCL-TPDIC-QCK-PGWYG 677
Query: 344 RECAQSPDEPSCYN---CNKTGHIARNCPEG 427
C+ + +P C N CNK CP G
Sbjct: 678 PTCSTALCDPVCLNGGSCNKPNTCL--CPNG 706
>AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 341 LCAPCHYICSNGQPPPCSRAQSARCGC 261
+C PCH S G P C++ + +C C
Sbjct: 1962 VCGPCHCAVSKGFDPDCNKT-NGQCQC 1987
>AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 341 LCAPCHYICSNGQPPPCSRAQSARCGC 261
+C PCH S G P C++ + +C C
Sbjct: 1962 VCGPCHCAVSKGFDPDCNKT-NGQCQC 1987
>AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
G-type receptor 1 (flamingo homolog, Drosophila) protein.
Length = 3014
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 341 LCAPCHYICSNGQPPPCSRAQSARCGC 261
+C PCH S G P C++ + +C C
Sbjct: 1962 VCGPCHCAVSKGFDPDCNKT-NGQCQC 1987
>AF284337-1|AAG14458.1| 221|Homo sapiens SEBOX protein.
Length = 221
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -2
Query: 308 GQPPPCSRAQSARCGCT*STSPAAG*SQRRG 216
GQPPP S C S+ PA G S R+G
Sbjct: 141 GQPPPSSGTPQRTSVCRHSSCPAPGLSPRQG 171
>AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo 2
protein.
Length = 3014
Score = 28.7 bits (61), Expect = 8.8
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 341 LCAPCHYICSNGQPPPCSRAQSARCGC 261
+C PCH S G P C++ + +C C
Sbjct: 1962 VCGPCHCAVSKGFDPDCNKT-NGQCQC 1987
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,066,509
Number of Sequences: 237096
Number of extensions: 1239586
Number of successful extensions: 5210
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 3849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4845
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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