Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_C15
(429 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 88 3e-18
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 61 3e-10
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 58 2e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 58 2e-09
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 58 3e-09
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 58 3e-09
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 58 3e-09
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 56 8e-09
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 56 8e-09
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 56 8e-09
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 40 0.001
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 40 0.001
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 40 0.001
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.002
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.002
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 36 0.012
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 36 0.012
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 36 0.016
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 35 0.028
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 35 0.028
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 35 0.028
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 35 0.028
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 34 0.038
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 32 0.15
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 32 0.20
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 32 0.20
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 30 0.61
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 30 0.61
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 30 0.61
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 30 0.61
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 30 0.61
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 30 0.81
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 1.1
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 29 1.4
U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical pr... 29 1.4
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 1.4
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 1.4
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 28 2.5
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 28 2.5
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 28 2.5
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 28 3.3
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 27 4.3
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 27 4.3
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 27 4.3
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 27 4.3
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 27 4.3
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 27 5.7
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 5.7
U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family ... 27 5.7
U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family ... 27 5.7
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 27 5.7
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 27 5.7
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 5.7
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 5.7
AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical ... 27 7.5
AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical ... 27 7.5
Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical pr... 26 10.0
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 26 10.0
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 26 10.0
AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein. 26 10.0
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 87.8 bits (208), Expect = 3e-18
Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 22/113 (19%)
Frame = +2
Query: 149 SVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEE--------- 301
S CY C TGHF+R+C +GG G C+ C GH++RDC
Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGY 94
Query: 302 -----------ADRCYRCNGTGHIARECAQ--SPDEPSCYNCNKTGHIARNCP 421
+CY C +GHI+REC + S +E CY C +TGHI+R+CP
Sbjct: 95 GGRGGEGRSFGGQKCYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCP 147
Score = 70.1 bits (164), Expect = 6e-13
Identities = 40/125 (32%), Positives = 51/125 (40%), Gaps = 30/125 (24%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEAD---- 307
MS CYKC + GH +R C G G C+ C TGHF+RDC +
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRG-GGGGSTCYNCQETGHFSRDCPKGGSGGGQ 59
Query: 308 --------RCYRCNGTGHIARECAQSPDE------------------PSCYNCNKTGHIA 409
CY C G GH +R+C + E CYNC ++GHI+
Sbjct: 60 RGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHIS 119
Query: 410 RNCPE 424
R C E
Sbjct: 120 RECTE 124
Score = 53.2 bits (122), Expect = 8e-08
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEAD 307
CY C R+GH +RECT+ G + + ++C++C TGH +RDC + +
Sbjct: 109 CYNCGRSGHISRECTESG--------SAEEKRCYQCQETGHISRDCPSQTN 151
Score = 49.2 bits (112), Expect = 1e-06
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 10/52 (19%)
Frame = +2
Query: 302 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEG 427
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+G
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKG 53
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 61.3 bits (142), Expect = 3e-10
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Frame = +2
Query: 137 KMSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADR-- 310
K++ S C+ C GH +C + + D CFKC H +CK++ +
Sbjct: 225 KITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGF 277
Query: 311 ----CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPE 424
C+ C GHI+R+C Q+ PD C C H+ R+CPE
Sbjct: 278 PYATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPE 324
Score = 31.5 bits (68), Expect = 0.27
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 3/75 (4%)
Frame = +2
Query: 203 GGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 373
G V DA +R K + R G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 374 SCYNCNKTGHIARNC 418
C+ C H C
Sbjct: 255 VCFKCGSMEHSIHEC 269
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 58.4 bits (135), Expect = 2e-09
Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 325
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 326 GTGHIARECAQSPDEP--SCYNCNKTGHIARNC 418
GH A +C Q P P C NC + GH A++C
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDC 654
Score = 47.6 bits (108), Expect = 4e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADR------CY 316
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 317 RCNGTGHIARECAQSPDE 370
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +2
Query: 251 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 415
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 416 CPE 424
C +
Sbjct: 631 CDQ 633
Score = 40.3 bits (90), Expect = 6e-04
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 263 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPE 424
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ 610
Score = 32.3 bits (70), Expect = 0.15
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2
Query: 137 KMSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDC 292
K+ C C + GHFA++C V E C +C GH+ +C
Sbjct: 635 KVPRGPCRNCGQEGHFAKDCQNERVRMEPT------EPCRRCAEEGHWGYEC 680
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 58.4 bits (135), Expect = 2e-09
Identities = 32/93 (34%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 325
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 326 GTGHIARECAQSPDEP--SCYNCNKTGHIARNC 418
GH A +C Q P P C NC + GH A++C
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDC 654
Score = 47.6 bits (108), Expect = 4e-06
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADR------CY 316
C C GHFA +C Q V R C C + GHFA+DC+ E R C
Sbjct: 618 CRNCGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCR 668
Query: 317 RCNGTGHIARECAQSPDE 370
RC GH EC P +
Sbjct: 669 RCAEEGHWGYECPTRPKD 686
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Frame = +2
Query: 251 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQS--PDEPSCYNCNKTGHIARN 415
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGP-CRNCGIEGHFAVD 630
Query: 416 CPE 424
C +
Sbjct: 631 CDQ 633
Score = 40.3 bits (90), Expect = 6e-04
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 263 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPE 424
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ 610
Score = 32.3 bits (70), Expect = 0.15
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +2
Query: 137 KMSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDC 292
K+ C C + GHFA++C V E C +C GH+ +C
Sbjct: 635 KVPRGPCRNCGQEGHFAKDCQNERVRMEPT------EPCRRCAEEGHWGYEC 680
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 58.0 bits (134), Expect = 3e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQG-----GVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 316
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 317 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 46.4 bits (105), Expect = 9e-06
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 269 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 424
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 46.4 bits (105), Expect = 9e-06
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 269 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 424
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +2
Query: 239 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 358
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +2
Query: 239 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 358
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 15/105 (14%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 328
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 329 -----------TGHIARECAQSPDE--PSCYNCNKTGHIARNCPE 424
G A + + C+NC GH + CPE
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 36.7 bits (81), Expect = 0.007
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEE 301
C+ C + GH + +C + R+ C+ C + GH +RDC EE
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 300
Score = 31.5 bits (68), Expect = 0.27
Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 15/106 (14%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQ--------GGVCARDAGF--NRQREKCFKCNRTGHFARDCKEE 301
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 302 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPE 424
+ + N G + Q E +C+NC + GH + +CPE
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPE 388
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 58.0 bits (134), Expect = 3e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQG-----GVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 316
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 317 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 46.4 bits (105), Expect = 9e-06
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 269 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 424
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 46.4 bits (105), Expect = 9e-06
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 269 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 424
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +2
Query: 239 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 358
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +2
Query: 239 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 358
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 15/105 (14%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 328
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 329 -----------TGHIARECAQSPDE--PSCYNCNKTGHIARNCPE 424
G A + + C+NC GH + CPE
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 36.7 bits (81), Expect = 0.007
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEE 301
C+ C + GH + +C + R+ C+ C + GH +RDC EE
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 300
Score = 31.5 bits (68), Expect = 0.27
Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 15/106 (14%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQ--------GGVCARDAGF--NRQREKCFKCNRTGHFARDCKEE 301
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 302 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPE 424
+ + N G + Q E +C+NC + GH + +CPE
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPE 388
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 58.0 bits (134), Expect = 3e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQG-----GVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 316
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 317 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 46.4 bits (105), Expect = 9e-06
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 269 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 424
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 46.4 bits (105), Expect = 9e-06
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = +2
Query: 269 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 424
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +2
Query: 239 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 358
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = +2
Query: 239 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 358
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413
Score = 38.7 bits (86), Expect = 0.002
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 15/105 (14%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG-- 328
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 329 -----------TGHIARECAQSPDE--PSCYNCNKTGHIARNCPE 424
G A + + C+NC GH + CPE
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 36.7 bits (81), Expect = 0.007
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEE 301
C+ C + GH + +C + R+ C+ C + GH +RDC EE
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEE 300
Score = 31.5 bits (68), Expect = 0.27
Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 15/106 (14%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQ--------GGVCARDAGF--NRQREKCFKCNRTGHFARDCKEE 301
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 302 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPE 424
+ + N G + Q E +C+NC + GH + +CPE
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPE 388
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 56.4 bits (130), Expect = 8e-09
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQG--------GVCARDAGF-NRQREKCFKCNRTGHFARDCKEEA 304
VCY C + GH +RECT+ G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGF--GGDGGFGGGEERGP 241
Query: 305 DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 242 MKCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 278
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +2
Query: 227 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 358
G + CF C + GH + DC KE R CY C GH +REC +
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 41.1 bits (92), Expect = 3e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 296 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 424
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 35.5 bits (78), Expect = 0.016
Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 17/107 (15%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEE-ADRCYRCNGT 331
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 332 GHIAR----------------ECAQSPDEPSCYNCNKTGHIARNCPE 424
G A + C+NC GH + CPE
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 56.4 bits (130), Expect = 8e-09
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQG--------GVCARDAGF-NRQREKCFKCNRTGHFARDCKEEA 304
VCY C + GH +RECT+ G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGF--GGDGGFGGGEERGP 241
Query: 305 DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 242 MKCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 278
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +2
Query: 227 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 358
G + CF C + GH + DC KE R CY C GH +REC +
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 41.1 bits (92), Expect = 3e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 296 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 424
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 35.5 bits (78), Expect = 0.016
Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 17/107 (15%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEE-ADRCYRCNGT 331
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 332 GHIAR----------------ECAQSPDEPSCYNCNKTGHIARNCPE 424
G A + C+NC GH + CPE
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 56.4 bits (130), Expect = 8e-09
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
Frame = +2
Query: 152 VCYKCNRTGHFARECTQG--------GVCARDAGF-NRQREKCFKCNRTGHFARDCKEEA 304
VCY C + GH +RECT+ G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGGGAGFGNNGGNDGF--GGDGGFGGGEERGP 241
Query: 305 DRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 421
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 242 MKCFNCKGEGHRSAECPEPPR--GCFNCGEQGHRSNECP 278
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Frame = +2
Query: 227 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 358
G + CF C + GH + DC KE R CY C GH +REC +
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 41.1 bits (92), Expect = 3e-04
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 296 EEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE 424
E + C+ C GH + +C + E CYNC + GH +R C E
Sbjct: 155 ERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTE 200
Score = 35.5 bits (78), Expect = 0.016
Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 17/107 (15%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEE-ADRCYRCNGT 331
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 332 GHIAR----------------ECAQSPDEPSCYNCNKTGHIARNCPE 424
G A + C+NC GH + CPE
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPE 259
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 245 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 409
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 410 RNCPE 424
NCP+
Sbjct: 688 WNCPK 692
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 212 CARDAGFNRQREKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 376
C++ + N +KC +C ++G C + +R C+RCN GHIA C + + S
Sbjct: 644 CSKKSKDNAS-QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 698
Score = 27.9 bits (59), Expect = 3.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 137 KMSSSVCYKCNRTGHFAREC 196
K+ + C++CN GH A C
Sbjct: 671 KLKNRACFRCNEMGHIAWNC 690
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 245 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 409
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 410 RNCPE 424
NCP+
Sbjct: 591 WNCPK 595
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 212 CARDAGFNRQREKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 376
C++ + N +KC +C ++G C + +R C+RCN GHIA C + + S
Sbjct: 547 CSKKSKDNAS-QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 601
Score = 27.9 bits (59), Expect = 3.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 137 KMSSSVCYKCNRTGHFAREC 196
K+ + C++CN GH A C
Sbjct: 574 KLKNRACFRCNEMGHIAWNC 593
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +2
Query: 245 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 409
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 410 RNCPE 424
NCP+
Sbjct: 602 WNCPK 606
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 212 CARDAGFNRQREKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 376
C++ + N +KC +C ++G C + +R C+RCN GHIA C + + S
Sbjct: 558 CSKKSKDNAS-QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 612
Score = 27.9 bits (59), Expect = 3.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 137 KMSSSVCYKCNRTGHFAREC 196
K+ + C++CN GH A C
Sbjct: 585 KLKNRACFRCNEMGHIAWNC 604
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 355
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.5 bits (73), Expect = 0.066
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 302 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 418
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 146 SSVCYKCNRTGHFARECT-QGGVCARDAGFNRQREKCFKCNRTG 274
S+ C+ C + GH A EC+ CA N + +C ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.002
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 355
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 33.5 bits (73), Expect = 0.066
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 302 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 418
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 146 SSVCYKCNRTGHFARECT-QGGVCARDAGFNRQREKCFKCNRTG 274
S+ C+ C + GH A EC+ CA N + +C ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 35.9 bits (79), Expect = 0.012
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 272 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 427
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCK 295
C C H + EC DA + KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECP-------DAPNVTNQIKCTNCGAFGHISKDCK 469
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 35.9 bits (79), Expect = 0.012
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +2
Query: 272 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 427
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 27.9 bits (59), Expect = 3.3
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCK 295
C C H + EC DA + KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECP-------DAPNVTNQIKCTNCGAFGHISKDCK 469
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 35.5 bits (78), Expect = 0.016
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2
Query: 374 SCYNCNKTGHIARNCPEG 427
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.9 bits (69), Expect = 0.20
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQG 205
MS CYKC + GH +R C G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNG 22
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 340
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 302 ADR-CYRCNGTGHIAREC 352
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 34.7 bits (76), Expect = 0.028
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +2
Query: 308 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPE 424
RC+RC H A+ C D CY C H++ CPE
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
Score = 31.1 bits (67), Expect = 0.35
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 248 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 358
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 34.7 bits (76), Expect = 0.028
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +2
Query: 308 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPE 424
RC+RC H A+ C D CY C H++ CPE
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
Score = 31.1 bits (67), Expect = 0.35
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 248 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 358
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 34.7 bits (76), Expect = 0.028
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +2
Query: 308 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPE 424
RC+RC H A+ C D CY C H++ CPE
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
Score = 31.1 bits (67), Expect = 0.35
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 248 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 358
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 34.7 bits (76), Expect = 0.028
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +2
Query: 308 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPE 424
RC+RC H A+ C D CY C H++ CPE
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
Score = 31.1 bits (67), Expect = 0.35
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 248 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 358
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 34.3 bits (75), Expect = 0.038
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARN 415
C C+ GH A C + R N H + + PD+ + CY C + GH A
Sbjct: 206 CHNCHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 416 CPEG 427
C +G
Sbjct: 265 CHKG 268
Score = 31.9 bits (69), Expect = 0.20
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 140 MSSSVCYKCNRTGHFARECTQGGV 211
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE 349
C+KC GH+A C + A + N T H+A E
Sbjct: 252 CYKCGEKGHYANRCHKGA-LAFLSN-TAHLAHE 282
Score = 27.5 bits (58), Expect = 4.3
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 374 SCYNCNKTGHIARNCP 421
+C+NC++ GH A CP
Sbjct: 205 TCHNCHERGHKATTCP 220
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.3 bits (70), Expect = 0.15
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVC--ARDAGFNRQREKCFKCNRTGHFARDCKEEADR 310
C++C+R GHF C Q + AR + ++ N +G ++ +E DR
Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410
Score = 31.5 bits (68), Expect = 0.27
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 338 IARECAQ--SPDEPSCYNCNKTGHIARNCPE 424
+ R+C Q +P + C+ C++ GH +CP+
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQ 1372
Score = 29.1 bits (62), Expect = 1.4
Identities = 25/80 (31%), Positives = 33/80 (41%)
Frame = +2
Query: 188 RECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 367
R+C QG A +RQ C +C+R GHF C + A AR+ S
Sbjct: 1344 RKCNQGS-----APTDRQ---CHQCHRIGHFVESCPQRA--------LAKEARKRFGSNS 1387
Query: 368 EPSCYNCNKTGHIARNCPEG 427
S Y N +G +N EG
Sbjct: 1388 TNSSYRSNDSGRGFKNGEEG 1407
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 31.9 bits (69), Expect = 0.20
Identities = 20/65 (30%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +2
Query: 149 SVCYKCNRTGHFAR--ECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRC 322
S C C+ T H R EC R+ CF C R+GH C C C
Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHC 370
Query: 323 NGTGH 337
G H
Sbjct: 371 KGNHH 375
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 31.9 bits (69), Expect = 0.20
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 311 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 424
CY+C GH++++C QS N KT H N E
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLE 349
Score = 31.1 bits (67), Expect = 0.35
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 371 PSCYNCNKTGHIARNCPE 424
P CY C GH++++CP+
Sbjct: 311 PYCYKCKVVGHVSKDCPQ 328
Score = 27.5 bits (58), Expect = 4.3
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQ 202
CYKC GH +++C Q
Sbjct: 313 CYKCKVVGHVSKDCPQ 328
Score = 26.6 bits (56), Expect = 7.5
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +2
Query: 251 CFKCNRTGHFARDCKEEA 304
C+KC GH ++DC + +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 30.3 bits (65), Expect = 0.61
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +2
Query: 158 YKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGH 337
Y C G+ A + Q +C + GF QR + + G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 338 IAREC 352
C
Sbjct: 338 NDGRC 342
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 30.3 bits (65), Expect = 0.61
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +2
Query: 158 YKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGH 337
Y C G+ A + Q +C + GF QR + + G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 338 IAREC 352
C
Sbjct: 338 NDGRC 342
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 30.3 bits (65), Expect = 0.61
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = +2
Query: 158 YKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGH 337
Y C G+ A + Q +C + GF QR + + G D + C R NGT +
Sbjct: 278 YVCQNDGYCAHDSNQMPICYCEQGFTGQRCEIECPSGFGGIHCDLPLQRPHCSRSNGTCY 337
Query: 338 IAREC 352
C
Sbjct: 338 NDGRC 342
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 30.3 bits (65), Expect = 0.61
Identities = 27/100 (27%), Positives = 35/100 (35%), Gaps = 2/100 (2%)
Frame = +2
Query: 134 SKMSSSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRC 313
SK S +CNR G F C + G C G KC C + + A C
Sbjct: 663 SKTSFPDSCQCNRVGSFGHTCDETGQCKCRPGV--AGIKCDHCLPSFWGIHLIAQGALSC 720
Query: 314 --YRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEG 427
C+ G +C Q+ + C N G CP G
Sbjct: 721 RPCGCSAFGSSRSDCEQTTGKCECKN-GALGDKCDLCPNG 759
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 30.3 bits (65), Expect = 0.61
Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Frame = +2
Query: 188 RECTQGGVCARDA-GFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSP 364
R C Q CA GF K C+ G DC +++ +C C G R+C Q
Sbjct: 825 RRCDQ---CAIGTYGFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQ 880
Query: 365 DE----PSCYNCNKTGH 403
P C C H
Sbjct: 881 PGFWGFPECRTCQCNDH 897
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 29.9 bits (64), Expect = 0.81
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +2
Query: 146 SSVCYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADR 310
+ +C +C + G C+ + + R +CF C GH + C + DR
Sbjct: 578 NGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHISTYCPKRIDR 629
Score = 29.9 bits (64), Expect = 0.81
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +2
Query: 311 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 424
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 281 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 424
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 29.1 bits (62), Expect = 1.4
Identities = 24/91 (26%), Positives = 32/91 (35%), Gaps = 2/91 (2%)
Frame = +2
Query: 161 KCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRC--YRCNGTG 334
+CNR G F C + G C G KC C + + A C C+ G
Sbjct: 739 QCNRVGSFGHTCDETGQCKCRPGV--AGIKCDHCLPSFWGIHLIAQGALSCRPCGCSAFG 796
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNCPEG 427
+C Q+ + C N G CP G
Sbjct: 797 SSRSDCEQTTGKCECKN-GALGDKCDLCPNG 826
>U28741-4|AAA68328.1| 747|Caenorhabditis elegans Hypothetical
protein F35D2.4 protein.
Length = 747
Score = 29.1 bits (62), Expect = 1.4
Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Frame = +2
Query: 212 CARDAGFNRQREKCFKCNRTGHFARD-----CKEEADRCYRCNGTGHIARECAQ----SP 364
C R FNR +C C T + D C + +R NG EC + SP
Sbjct: 5 CTRLQYFNRIELRCEICPNTTIPSDDMMSCKCSKNQIEIFR-NGFVPTCEECPEGTLSSP 63
Query: 365 DEPSCYNCN 391
D+ C NCN
Sbjct: 64 DQTGCLNCN 72
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 296 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 403
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.1 bits (62), Expect = 1.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 236 RQREKCFKCNRTGHFARDCKEEA 304
R + +C C GH AR+CK++A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
Score = 29.1 bits (62), Expect = 1.4
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKC 262
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
Score = 27.1 bits (57), Expect = 5.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 377 CYNCNKTGHIARNC 418
C+ C GH+ARNC
Sbjct: 576 CHYCKNVGHMARNC 589
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 28.3 bits (60), Expect = 2.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 377 CYNCNKTGHIARNCPE 424
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 161 KCNRT---GHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE 298
KCNR G+F R C+Q CA + +C +C + G+ C E
Sbjct: 1239 KCNRPCLKGYFGRHCSQSCRCANSKSCDHISGRC-QCPK-GYAGHSCTE 1285
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +2
Query: 161 KCNRT---GHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKE 298
KCNR G+F R C+Q CA + +C +C + G+ C E
Sbjct: 1239 KCNRPCLKGYFGRHCSQSCRCANSKSCDHISGRC-QCPK-GYAGHSCTE 1285
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN-GT 331
CY C + GH A EC + D N +R+ + + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRRK---KSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 332 GHIARECAQSPDEPS 376
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 209 VCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCNG 328
VC DAG + C C + + DC KE D C G
Sbjct: 675 VCTDDAGTAHIVDDCTSCVCSAEGSADCYKEACDESLECRG 715
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 209 VCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCNG 328
VC DAG + C C + + DC KE D C G
Sbjct: 609 VCTDDAGTAHIVDDCTSCVCSAEGSADCYKEACDESLECRG 649
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 209 VCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCNG 328
VC DAG + C C + + DC KE D C G
Sbjct: 675 VCTDDAGTAHIVDDCTSCVCSAEGSADCYKEACDESLECRG 715
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 209 VCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCNG 328
VC DAG + C C + + DC KE D C G
Sbjct: 609 VCTDDAGTAHIVDDCTSCVCSAEGSADCYKEACDESLECRG 649
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 209 VCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCNG 328
VC DAG + C C + + DC KE D C G
Sbjct: 609 VCTDDAGTAHIVDDCTSCVCSAEGSADCYKEACDESLECRG 649
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 209 VCARDAGFNRQREKCFKCNRTGHFARDC-KEEADRCYRCNG 328
VC DAG + C C + + DC KE D C G
Sbjct: 609 VCTDDAGTAHIVDDCTSCVCSAEGSADCYKEACDESLECRG 649
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.1 bits (57), Expect = 5.7
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Frame = +2
Query: 179 HFAREC---TQGGV---CARDAGFNRQREKCF--KCNRTGHFARDCKEEADRCYRCNGTG 334
H + C TQG V C+ + G +E +C+R D + C CN TG
Sbjct: 936 HTCKPCGCHTQGAVNPQCSEENGECECKENYIGAQCDRCKENHGDVENGCPAC-DCNDTG 994
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNCPE 424
I +C Q + +C K G + C +
Sbjct: 995 SIGSDCDQVSGQCNC----KQGVFGKQCDQ 1020
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.1 bits (57), Expect = 5.7
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +2
Query: 173 TGHFARECT---QGGVCARDAGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 337
T +FA+ C +G + + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 338 IARECAQSPDEPSCYNC--NKTGHIARNC 418
+ + P+ CY C N G +C
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESC 1973
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.1 bits (57), Expect = 5.7
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +2
Query: 173 TGHFARECT---QGGVCARDAGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 337
T +FA+ C +G + + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 338 IARECAQSPDEPSCYNC--NKTGHIARNC 418
+ + P+ CY C N G +C
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESC 1973
>U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform a protein.
Length = 95
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +2
Query: 239 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 406
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 407 ARNCPEG 427
+ P+G
Sbjct: 65 RKFGPKG 71
Score = 26.6 bits (56), Expect = 7.5
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDC---KEEAD-RCYRC 322
C KC ++ + A E + GG + + CFKCN C EA+ C +C
Sbjct: 11 CPKCGKSVYAAEEMSAGGY--------KWHKFCFKCNMCNKLLDSCTVAPHEAELYCKQC 62
Query: 323 NG 328
+G
Sbjct: 63 HG 64
>U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform b protein.
Length = 113
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +2
Query: 239 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 406
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 407 ARNCPEG 427
+ P+G
Sbjct: 65 RKFGPKG 71
Score = 26.6 bits (56), Expect = 7.5
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 4/62 (6%)
Frame = +2
Query: 155 CYKCNRTGHFARECTQGGVCARDAGFNRQREKCFKCNRTGHFARDC---KEEAD-RCYRC 322
C KC ++ + A E + GG + + CFKCN C EA+ C +C
Sbjct: 11 CPKCGKSVYAAEEMSAGGY--------KWHKFCFKCNMCNKLLDSCTVAPHEAELYCKQC 62
Query: 323 NG 328
+G
Sbjct: 63 HG 64
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.1 bits (57), Expect = 5.7
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Frame = +2
Query: 179 HFAREC---TQGGV---CARDAGFNRQREKCF--KCNRTGHFARDCKEEADRCYRCNGTG 334
H + C TQG V C+ + G +E +C+R D + C CN TG
Sbjct: 936 HTCKPCGCHTQGAVNPQCSEENGECECKENYIGAQCDRCKENHGDVENGCPAC-DCNDTG 994
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNCPE 424
I +C Q + +C K G + C +
Sbjct: 995 SIGSDCDQVSGQCNC----KQGVFGKQCDQ 1020
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.1 bits (57), Expect = 5.7
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Frame = +2
Query: 179 HFAREC---TQGGV---CARDAGFNRQREKCF--KCNRTGHFARDCKEEADRCYRCNGTG 334
H + C TQG V C+ + G +E +C+R D + C CN TG
Sbjct: 936 HTCKPCGCHTQGAVNPQCSEENGECECKENYIGAQCDRCKENHGDVENGCPAC-DCNDTG 994
Query: 335 HIARECAQSPDEPSCYNCNKTGHIARNCPE 424
I +C Q + +C K G + C +
Sbjct: 995 SIGSDCDQVSGQCNC----KQGVFGKQCDQ 1020
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.1 bits (57), Expect = 5.7
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +2
Query: 173 TGHFARECT---QGGVCARDAGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 337
T +FA+ C +G + + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 338 IARECAQSPDEPSCYNC--NKTGHIARNC 418
+ + P+ CY C N G +C
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESC 1973
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.1 bits (57), Expect = 5.7
Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)
Frame = +2
Query: 173 TGHFARECT---QGGVCARDAGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 337
T +FA+ C +G + + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 338 IARECAQSPDEPSCYNC--NKTGHIARNC 418
+ + P+ CY C N G +C
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESC 1973
>AC024809-9|AAO12399.1| 700|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2b protein.
Length = 700
Score = 26.6 bits (56), Expect = 7.5
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +2
Query: 287 DCKEEADRCYRCNGTGH-IARECAQSPDEPSCYNCNKTGHIARNCP 421
D +E C CN H + + PD + C K H+ CP
Sbjct: 249 DVADEMVFCDMCNTCVHMVCAGIEELPDPAEPWKCAKCAHMGTPCP 294
>AC024809-8|AAF59546.2| 741|Caenorhabditis elegans Hypothetical
protein Y53G8AR.2a protein.
Length = 741
Score = 26.6 bits (56), Expect = 7.5
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +2
Query: 287 DCKEEADRCYRCNGTGH-IARECAQSPDEPSCYNCNKTGHIARNCP 421
D +E C CN H + + PD + C K H+ CP
Sbjct: 290 DVADEMVFCDMCNTCVHMVCAGIEELPDPAEPWKCAKCAHMGTPCP 335
>Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical
protein DY3.7 protein.
Length = 922
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 338 CAPCHYICSNGQPPPCSRAQSARC 267
C P H NG P PC R A+C
Sbjct: 542 CVP-HEARGNGGPGPCKRKPGAQC 564
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/55 (23%), Positives = 21/55 (38%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 409
E C NR+G + D + D C + + D C C K+ H++
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHLS 109
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/55 (23%), Positives = 21/55 (38%)
Frame = +2
Query: 245 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 409
E C NR+G + D + D C + + D C C K+ H++
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHLS 109
>AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein.
Length = 922
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 338 CAPCHYICSNGQPPPCSRAQSARC 267
C P H NG P PC R A+C
Sbjct: 542 CVP-HEARGNGGPGPCKRKPGAQC 564
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,151,238
Number of Sequences: 27780
Number of extensions: 183702
Number of successful extensions: 922
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -