Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_C12
         (524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            25   1.6  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   6.3  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   8.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.3  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    23   8.3  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 7/19 (36%), Positives = 16/19 (84%)
 Frame = -2

Query: 292 GSTRVQSVWCRDSLNHQES 236
           G+T+V+ +W +++ NH++S
Sbjct: 129 GTTQVKVLWLKNNANHEQS 147


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +3

Query: 378  PEASVRG-EGKRRRTLDREADGRRHSHRHGSAGLFGRPAPQTHRIRSRR 521
            PEA  +G  G++    D +A G       GS G  G  AP+  + +  +
Sbjct: 895  PEAKKKGGRGRKDYISDSDASGGEVGGGGGSGGEEGSGAPKERKRKGEK 943


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 177 GVPGDSKLGTPG 212
           G PGD+K G PG
Sbjct: 533 GTPGDAKEGRPG 544


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 366 EQREPEASVRGEGKRRRTLDREADGRRHSH 455
           EQRE E       +R R  +RE +  R  H
Sbjct: 511 EQREKEREREAARERERERERERERERMMH 540


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -3

Query: 312 PHVGPFAVQLVCSQCGV 262
           P  G F + LVC  CGV
Sbjct: 3   PQAGRFLLLLVCVFCGV 19


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,695
Number of Sequences: 2352
Number of extensions: 11464
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)