Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_C11
(432 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.20
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 30 0.62
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 30 0.62
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 30 0.62
Z81555-6|CAJ85762.1| 709|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z81555-5|CAB04517.2| 694|Caenorhabditis elegans Hypothetical pr... 29 1.1
U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of ... 29 1.1
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 29 1.1
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 29 1.1
U50313-2|AAY86230.1| 883|Caenorhabditis elegans Inositol 1,4,5-... 29 1.4
U50313-1|AAY86229.1| 923|Caenorhabditis elegans Inositol 1,4,5-... 29 1.4
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 29 1.4
AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3... 29 1.4
Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical pr... 29 1.9
U88172-2|AAB42262.1| 368|Caenorhabditis elegans Hypothetical pr... 29 1.9
U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical p... 29 1.9
Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical p... 28 2.5
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 28 2.5
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 28 2.5
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 28 2.5
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 28 2.5
Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical pr... 28 3.3
AF043703-2|AAK21501.2| 68|Caenorhabditis elegans Hypothetical ... 28 3.3
Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical p... 27 4.4
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 27 4.4
Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical p... 27 4.4
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 27 4.4
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 27 4.4
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 27 4.4
AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine re... 27 4.4
U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical pr... 27 5.8
AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric ... 27 5.8
AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric ... 27 5.8
Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 27 7.7
Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical pr... 27 7.7
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 31.9 bits (69), Expect = 0.20
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Frame = +2
Query: 17 QEEKESTSAETGDKVKTDKT-ESADENKKKLDNGVEPSNVSGSEDKLWADVDKDIGELLR 193
+++K+S E DK+ KT E+ E K K D E +++K D +K E+
Sbjct: 96 KDDKKSKKTEEKDKLSVKKTQETKSERKDKKDERKEDDKKEENKEKS-KDEEKKKDEVKD 154
Query: 194 EVDPQGNEGSXXXXXLGRYDKFRKSDKKVENGAGENEANVLNPPADKKSATE 349
+ + + + + ++F+K KK E + E N K+ T+
Sbjct: 155 KKEDEKMDDKKPGEKEEKKEEFKKEMKKEEKKEEKKEEPKKNDAPKKEGETK 206
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = +2
Query: 20 EEKESTSAETGDKVKT---DKTESADENKKKLD 109
EE E+ +AET DK+KT +K E ADE +K +
Sbjct: 332 EEAEAHAAETFDKLKTVEKEKKEKADEETRKAE 364
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 30.3 bits (65), Expect = 0.62
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = +2
Query: 20 EEKESTSAETGDKVKT---DKTESADENKKKLD 109
EE E+ +AET DK+KT +K E ADE +K +
Sbjct: 332 EEAEAHAAETFDKLKTVEKEKKEKADEETRKAE 364
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 30.3 bits (65), Expect = 0.62
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +2
Query: 17 QEEKESTSAETGDKVKTDKT-ESADENKKKLDNGVEPSNVSGSEDKLWADVDKDIGELLR 193
+++K+S E DK+ KT E+ E K K D E S++K D +K E+
Sbjct: 90 KDDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKEESKEKS-KDEEKKKDEVKD 148
Query: 194 EVDPQGNEGSXXXXXLGRYDKFRKSDKKVENGAGENE 304
+ + + + + ++ +K KK E + E
Sbjct: 149 KKEDEKKDDKKPGEKEEKKEEVKKETKKEEKKEEKKE 185
>Z81555-6|CAJ85762.1| 709|Caenorhabditis elegans Hypothetical
protein F58E10.1b protein.
Length = 709
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 44 ETGDKVKTDKTESADENKKKLDNGVEPSNVSGSEDKLWADVDKDIGELLRE-VDPQGNEG 220
E D + D+ +AD E + ED A+VD + G + R D +G+
Sbjct: 78 ECMDARRVDQLPTADRRLLYSFAAAEEEDAEDDED---AEVDAEHGGIRRRRTDSEGSRI 134
Query: 221 SXXXXXLGRYDKFRKSDK 274
S LGR ++ RKS +
Sbjct: 135 SVGQASLGRLNRIRKSTR 152
>Z81555-5|CAB04517.2| 694|Caenorhabditis elegans Hypothetical
protein F58E10.1a protein.
Length = 694
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 44 ETGDKVKTDKTESADENKKKLDNGVEPSNVSGSEDKLWADVDKDIGELLRE-VDPQGNEG 220
E D + D+ +AD E + ED A+VD + G + R D +G+
Sbjct: 63 ECMDARRVDQLPTADRRLLYSFAAAEEEDAEDDED---AEVDAEHGGIRRRRTDSEGSRI 119
Query: 221 SXXXXXLGRYDKFRKSDK 274
S LGR ++ RKS +
Sbjct: 120 SVGQASLGRLNRIRKSTR 137
>U53150-7|ABB51189.1| 1375|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform c protein.
Length = 1375
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 20 EEKESTSAETGDKVKTDKTESADENKKK 103
EEKES ET D +KT+ + KKK
Sbjct: 728 EEKESKDQETNDDLKTESGQEKKRRKKK 755
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 20 EEKESTSAETGDKVKTDKTESADENKKK 103
EEKES ET D +KT+ + KKK
Sbjct: 728 EEKESKDQETNDDLKTESGQEKKRRKKK 755
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 20 EEKESTSAETGDKVKTDKTESADENKKK 103
EEKES ET D +KT+ + KKK
Sbjct: 728 EEKESKDQETNDDLKTESGQEKKRRKKK 755
>U50313-2|AAY86230.1| 883|Caenorhabditis elegans Inositol
1,4,5-trisphosphate receptorinteracting protein protein
1, isoform b protein.
Length = 883
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 53 DKVKTDKTESADENKKKLDNGVEPSNVSGSEDKLWADVDKDIGELLREVD 202
+++ + ESA E EP + +GS + W +V +++ E + E+D
Sbjct: 61 ERIPSSSVESATEQYMLEIKEEEPYSQAGSSSESWPEVKEEVIEPVEEID 110
>U50313-1|AAY86229.1| 923|Caenorhabditis elegans Inositol
1,4,5-trisphosphate receptorinteracting protein protein
1, isoform a protein.
Length = 923
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +2
Query: 53 DKVKTDKTESADENKKKLDNGVEPSNVSGSEDKLWADVDKDIGELLREVD 202
+++ + ESA E EP + +GS + W +V +++ E + E+D
Sbjct: 61 ERIPSSSVESATEQYMLEIKEEEPYSQAGSSSESWPEVKEEVIEPVEEID 110
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 29.1 bits (62), Expect = 1.4
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Frame = +2
Query: 17 QEEKESTSAETGDKVKTD-KTESADENKK-KLDNGVEPSNVSGSEDKLWADVDKDIGELL 190
+EEK+ + GDK + D K E DE+KK + + E + +DK D KD +
Sbjct: 88 EEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDK--KDEKKDEKKDE 145
Query: 191 REVDPQGNEGSXXXXXLGRYDKFRKSDKKVENGAGENEANVLNPPADKK 337
++ + ++ S + + +K + K E+ E++ DKK
Sbjct: 146 KKEKSKKSKKSSKSKKSKKSKREKKDEDKKEDDKKEDDKKDDKKEDDKK 194
>AF000195-3|AAC24268.1| 689|Caenorhabditis elegans Hmg protein 3
protein.
Length = 689
Score = 29.1 bits (62), Expect = 1.4
Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 9/123 (7%)
Frame = +2
Query: 5 EDFIQEEKESTSAE------TGDKVKTDKTESADENKKKLDNGVEPSNVSGSE--DKLWA 160
ED I K + AE D TD+ D++ KK N + S SGSE D+ +
Sbjct: 445 EDDIDPYKSTVKAEGREQDDDSDDESTDEDYDLDKDMKKQKNDKDSSEGSGSEPDDEYDS 504
Query: 161 DVDKDIGELLREVDP-QGNEGSXXXXXLGRYDKFRKSDKKVENGAGENEANVLNPPADKK 337
+KD E DP + N + +K K +K V+ A + +P K+
Sbjct: 505 GSEKDASG-TGESDPDEENIEPKKKESKEKKNKREKKEKPVKEKAVKKGKKTKDPNEPKR 563
Query: 338 SAT 346
+ T
Sbjct: 564 ATT 566
>Z72511-4|CAA96660.1| 395|Caenorhabditis elegans Hypothetical
protein F55A11.7 protein.
Length = 395
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -3
Query: 361 SGIDFCRRFFVSWWIQHICLVF 296
S +DFCRR++ IQH+C VF
Sbjct: 220 SFVDFCRRYY----IQHLCYVF 237
>U88172-2|AAB42262.1| 368|Caenorhabditis elegans Hypothetical
protein ZK354.6 protein.
Length = 368
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 20 EEKESTSAETGDKVKTDKTESADENKKKLDNGVEPSNVSGS 142
EEK+ T + D+ K + +++K+K D E N++G+
Sbjct: 8 EEKKETEEKKDDESKKKDEKKEEKSKRKEDEKKEKQNIAGA 48
>U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical
protein F27C1.11 protein.
Length = 1037
Score = 28.7 bits (61), Expect = 1.9
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Frame = +2
Query: 29 ESTSAETGDKVKTDKTESADENKKKLDNG----VEPSNVSGSEDKLWADVDKDIGELLRE 196
++TS E K K D S+ E+ K D+G + S S +K+ + I E LR
Sbjct: 236 KTTSKEVNKKPKKDTAMSSAESNKTKDSGKGTSLNNSQQSERHEKMTEKKAQMIREELRT 295
Query: 197 VDPQGNEGSXXXXXLGRYDKFRKSDKKVENGAGENEANVLNPPADKKSATEVNTTA 364
Q N + D R+++ E+ A ++ + ++++AT T+A
Sbjct: 296 NLKQQNHQNSSSDQYSEEDLIREAESDFEHDATGIQSGT-SDEEEEEAATSNATSA 350
>Z70034-11|CAA93853.2| 364|Caenorhabditis elegans Hypothetical
protein C18E9.2a protein.
Length = 364
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 17 QEEKESTSAETGDKVKTDKTESADENKKK 103
+EE+ +T AE GD+ + K E DE KKK
Sbjct: 130 KEEETATEAE-GDEKEVKKDEKKDEEKKK 157
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 28.3 bits (60), Expect = 2.5
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +2
Query: 17 QEEKESTSAETGDKVKTD-KTESADENKK-KLDNGVEPSNVSGSEDKLWADVDKDIGELL 190
+EEK+ + GDK + D K E DE+KK + + E + +DK D KD E
Sbjct: 88 EEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDK--KDEKKD--EKK 143
Query: 191 REVDPQGNEGSXXXXXLGRYDKFRKSDK-KVENGAGENEANVLNPPADKK 337
E + E S + K +KS + K + E++ + DKK
Sbjct: 144 DEKKDEKKEKSKKSKKSSKSKKSKKSKREKKDEEKKEDDKKEDDKKDDKK 193
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +2
Query: 14 IQEEKESTSAETGDKVKTDKTESADE-NKKKLDNGVEPSNV 133
++EEK+ S + + K KTES DE N++ + G +P +
Sbjct: 127 LKEEKKEKSKKVNKEKKISKTESDDEDNEQPPEPGSDPRKI 167
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 28.3 bits (60), Expect = 2.5
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Frame = +2
Query: 20 EEKESTSAETGDKVKTDKTESADEN-------KKKLDNGVEPSNVSGSEDKLWADVDKDI 178
+EK+ E DK K DK ++ D+ KKK D+ + + +DK DKD
Sbjct: 248 KEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDD 307
Query: 179 GELLREVDPQGNEGSXXXXXLGRYDKFRKSDKKVENGAGENE 304
+ +E D + + D+ K DKK ++ ++E
Sbjct: 308 EDEEKEKDKKKKDKKKDDD--DDDDEKEKKDKKKKDDKDDDE 347
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 28.3 bits (60), Expect = 2.5
Identities = 25/107 (23%), Positives = 44/107 (41%)
Frame = +2
Query: 17 QEEKESTSAETGDKVKTDKTESADENKKKLDNGVEPSNVSGSEDKLWADVDKDIGELLRE 196
+EEK+ + ++ K +K E +++KK + E SEDK + +KD ++
Sbjct: 90 KEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDD---KK 146
Query: 197 VDPQGNEGSXXXXXLGRYDKFRKSDKKVENGAGENEANVLNPPADKK 337
D + ++ S K K D K E + E +KK
Sbjct: 147 EDKKDDKKSDNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKK 193
>Z81068-8|CAB02988.1| 490|Caenorhabditis elegans Hypothetical
protein F25H5.7 protein.
Length = 490
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +2
Query: 14 IQEEKESTSAETGDKVKTDKTESADE-NKKKLDNGVEPSNV 133
++EEK+ S + + K +K+ES DE N++ + G +P +
Sbjct: 126 LREEKKEQSKKVNKEKKMNKSESVDEDNEQPPEPGSDPRKI 166
>AF043703-2|AAK21501.2| 68|Caenorhabditis elegans Hypothetical
protein W10C8.3 protein.
Length = 68
Score = 27.9 bits (59), Expect = 3.3
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 328 SWWIQHICL-VFSGAIFNFFIALSEF 254
+WW+ +ICL +FS NFF+ F
Sbjct: 42 AWWLNNICLSIFSNFRENFFLLFQFF 67
>Z93382-11|CAI46609.1| 390|Caenorhabditis elegans Hypothetical
protein F45G2.2b protein.
Length = 390
Score = 27.5 bits (58), Expect = 4.4
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 23 EKESTSAETGDKVKTD-KTESADENKKKLDNGVEPSNVSGSEDKLWADV-DKDIGELLRE 196
EK+ E K + + + + ADE + K+D E + + D++ D +K+I EL R
Sbjct: 11 EKKCKELEENHKREEEARKKYADELRAKIDQ-YEETKAAHERDRMLLDKRNKEIEELNRN 69
Query: 197 VDPQGNEGSXXXXXLGRYDKFRKSDKK 277
+ + ++ R+ +KK
Sbjct: 70 LKAESESNYENAKKASELERLREKEKK 96
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 27.5 bits (58), Expect = 4.4
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 23 EKESTSAETGDKVKTD-KTESADENKKKLDNGVEPSNVSGSEDKLWADV-DKDIGELLRE 196
EK+ E K + + + + ADE + K+D E + + D++ D +K+I EL R
Sbjct: 856 EKKCKELEENHKREEEARKKYADELRAKIDQ-YEETKAAHERDRMLLDKRNKEIEELNRN 914
Query: 197 VDPQGNEGSXXXXXLGRYDKFRKSDKK 277
+ + ++ R+ +KK
Sbjct: 915 LKAESESNYENAKKASELERLREKEKK 941
>Z70284-14|CAA94285.4| 422|Caenorhabditis elegans Hypothetical
protein K07F5.14 protein.
Length = 422
Score = 27.5 bits (58), Expect = 4.4
Identities = 18/87 (20%), Positives = 36/87 (41%)
Frame = +2
Query: 41 AETGDKVKTDKTESADENKKKLDNGVEPSNVSGSEDKLWADVDKDIGELLREVDPQGNEG 220
++ GD + ++A +KK + + SED+ D ++D R P+G +
Sbjct: 56 SDDGDDQDEETEKTAANGEKKTSRSSKRPKLFDSEDENDKDEEEDFEIKNRHSGPKGEKL 115
Query: 221 SXXXXXLGRYDKFRKSDKKVENGAGEN 301
+F+ DK E+ + E+
Sbjct: 116 MHLESRFNSDPRFKLDDKFAESDSDED 142
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 20 EEKESTSAETGDKVKTDKTESADENKKKLDNGVEPSNVSGSEDKLWADVDKD 175
++KE + + +K KT+ E +E KKK + E + ++K D +K+
Sbjct: 115 DKKEESKEDKKEKTKTEDNEGKNEEKKK-EKKEEKKDEKEKKEKTEDDKEKE 165
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 17 QEEKESTSAETGDKVKTDKTESADENKKKLD 109
+E++E + + G+K D+ E D++KKK D
Sbjct: 72 KEKREKKNKKKGNKKDEDEEEEEDKDKKKKD 102
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 27.5 bits (58), Expect = 4.4
Identities = 25/97 (25%), Positives = 34/97 (35%)
Frame = +2
Query: 20 EEKESTSAETGDKVKTDKTESADENKKKLDNGVEPSNVSGSEDKLWADVDKDIGELLREV 199
+EKES + E + K +N+ + DNG N G E + D + E
Sbjct: 140 DEKESENREEWSRRSRRKCGEESDNEIESDNGEASDN--GEESDNGEESDNEEASDNGEA 197
Query: 200 DPQGNEGSXXXXXLGRYDKFRKSDKKVENGAGENEAN 310
G E D +SD E G GE N
Sbjct: 198 SDNGEESDNEEAS----DNGEESDNGEERGNGEASDN 230
Score = 27.1 bits (57), Expect = 5.8
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +2
Query: 26 KESTSAETGDKVKTDKTESADENKKKLDNGVEPSNVSGSEDKLWADVDKDIG 181
+ES + E D + A +N ++ DNG E N S++ ++ ++IG
Sbjct: 316 EESDNEEASDNGEESDNGEASDNGEESDNGEERDNGEASDNGEESENGEEIG 367
>AF016428-1|AAO26001.1| 330|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 66 protein.
Length = 330
Score = 27.5 bits (58), Expect = 4.4
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 299 NEANVLNPPADKKSATEVNTTA*LRTKVTSIIFILIVCV 415
NE ++LN + E+ TA T + +II+ +I+CV
Sbjct: 164 NEVHILNDTLMRTRNPELVKTATNTTAIFTIIYFIIICV 202
>U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical
protein W05H9.2 protein.
Length = 851
Score = 27.1 bits (57), Expect = 5.8
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 23 EKESTSAETGDKVKTDKTESADENKKKLDNGVEPSNVSGSEDKLWADVDKDIGELLREVD 202
E E T +ETG TD E + ++++ VE + ED+ + ++D E R+ D
Sbjct: 731 ESEETGSETGSDYATD--EGPNVGRRRVRRNVELESDDDDEDEEEDEEEEDGVE--RQFD 786
Query: 203 PQ 208
P+
Sbjct: 787 PE 788
>AC006708-26|AAF60419.1| 1724|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform a protein.
Length = 1724
Score = 27.1 bits (57), Expect = 5.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 263 KSDKKVENGAGENEANVLNPPADK---KSATEVNTTA*LRTKVTSIIFILIVCVC 418
+SDK E G+NE NV +K K A EV R S+++ ++ C
Sbjct: 470 QSDKSDEENDGDNEENVSKKKEEKKKEKKAKEVKEVG--RMDAMSVLYNIVYMAC 522
>AC006708-25|AAK68883.1| 1758|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 6, isoform b protein.
Length = 1758
Score = 27.1 bits (57), Expect = 5.8
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +2
Query: 263 KSDKKVENGAGENEANVLNPPADK---KSATEVNTTA*LRTKVTSIIFILIVCVC 418
+SDK E G+NE NV +K K A EV R S+++ ++ C
Sbjct: 470 QSDKSDEENDGDNEENVSKKKEEKKKEKKAKEVKEVG--RMDAMSVLYNIVYMAC 522
>Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical
protein R107.4d protein.
Length = 817
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 161 LPTVYLHYRKHLMVQLHCLISSYFH 87
LP + Y K L+ + CL+ S+FH
Sbjct: 301 LPAKFTRYPKWLVSTMTCLLRSFFH 325
>Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical
protein R107.4c protein.
Length = 816
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 161 LPTVYLHYRKHLMVQLHCLISSYFH 87
LP + Y K L+ + CL+ S+FH
Sbjct: 301 LPAKFTRYPKWLVSTMTCLLRSFFH 325
>Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical
protein R107.4b protein.
Length = 820
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 161 LPTVYLHYRKHLMVQLHCLISSYFH 87
LP + Y K L+ + CL+ S+FH
Sbjct: 301 LPAKFTRYPKWLVSTMTCLLRSFFH 325
>Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical
protein R107.4a protein.
Length = 754
Score = 26.6 bits (56), Expect = 7.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 161 LPTVYLHYRKHLMVQLHCLISSYFH 87
LP + Y K L+ + CL+ S+FH
Sbjct: 301 LPAKFTRYPKWLVSTMTCLLRSFFH 325
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,315,976
Number of Sequences: 27780
Number of extensions: 123493
Number of successful extensions: 700
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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