Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_C10
         (413 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC091496-1|AAH91496.1|  620|Homo sapiens FBXO21 protein protein.       30   3.5  
BC042333-1|AAH42333.1|  477|Homo sapiens FBXO21 protein protein.       30   3.5  
BC034045-1|AAH34045.1|  537|Homo sapiens FBXO21 protein protein.       30   3.5  
AF174601-1|AAF04522.1|  621|Homo sapiens F-box protein Fbx21 pro...    30   3.5  
AB020682-1|BAA74898.1|  621|Homo sapiens KIAA0875 protein protein.     30   3.5  

>BC091496-1|AAH91496.1|  620|Homo sapiens FBXO21 protein protein.
          Length = 620

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +2

Query: 347 NRNIHT-PHGYVQKYYNVLYE 406
           N N+H+ PHG+ Q +YNVL E
Sbjct: 528 NMNVHSLPHGHHQPFYNVLVE 548


>BC042333-1|AAH42333.1|  477|Homo sapiens FBXO21 protein protein.
          Length = 477

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +2

Query: 347 NRNIHT-PHGYVQKYYNVLYE 406
           N N+H+ PHG+ Q +YNVL E
Sbjct: 385 NMNVHSLPHGHHQPFYNVLVE 405


>BC034045-1|AAH34045.1|  537|Homo sapiens FBXO21 protein protein.
          Length = 537

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +2

Query: 347 NRNIHT-PHGYVQKYYNVLYE 406
           N N+H+ PHG+ Q +YNVL E
Sbjct: 445 NMNVHSLPHGHHQPFYNVLVE 465


>AF174601-1|AAF04522.1|  621|Homo sapiens F-box protein Fbx21
           protein.
          Length = 621

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +2

Query: 347 NRNIHT-PHGYVQKYYNVLYE 406
           N N+H+ PHG+ Q +YNVL E
Sbjct: 529 NMNVHSLPHGHHQPFYNVLVE 549


>AB020682-1|BAA74898.1|  621|Homo sapiens KIAA0875 protein protein.
          Length = 621

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +2

Query: 347 NRNIHT-PHGYVQKYYNVLYE 406
           N N+H+ PHG+ Q +YNVL E
Sbjct: 529 NMNVHSLPHGHHQPFYNVLVE 549


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,035,438
Number of Sequences: 237096
Number of extensions: 880162
Number of successful extensions: 1488
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1488
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)