Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_C10
(413 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 24 0.78
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 24 0.78
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 24 0.78
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 24 0.78
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 24 0.78
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 24 0.78
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 24 0.78
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 24 0.78
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 24 0.78
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 0.78
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 0.78
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 20 9.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 20 9.6
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.78
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 338 FKENRNIHTPHGYVQKYYNVLY 403
+ N N + H Y + YYN+ Y
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINY 115
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.78
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 338 FKENRNIHTPHGYVQKYYNVLY 403
+ N N + H Y + YYN+ Y
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINY 115
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.78
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 338 FKENRNIHTPHGYVQKYYNVLY 403
+ N N + H Y + YYN+ Y
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINY 115
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.78
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 338 FKENRNIHTPHGYVQKYYNVLY 403
+ N N + H Y + YYN+ Y
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINY 115
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.78
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 338 FKENRNIHTPHGYVQKYYNVLY 403
+ N N + H Y + YYN+ Y
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINY 115
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.78
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 338 FKENRNIHTPHGYVQKYYNVLY 403
+ N N + H Y + YYN+ Y
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINY 115
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.78
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 338 FKENRNIHTPHGYVQKYYNVLY 403
+ N N + H Y + YYN+ Y
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINY 115
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.78
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 338 FKENRNIHTPHGYVQKYYNVLY 403
+ N N + H Y + YYN+ Y
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINY 115
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 0.78
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 338 FKENRNIHTPHGYVQKYYNVLY 403
+ N N + H Y + YYN+ Y
Sbjct: 94 YNNNYNNYNKHNYNKLYYNINY 115
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 0.78
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 338 FKENRNIHTPHGYVQKYYNVLY 403
+ N N + H Y + YYN+ Y
Sbjct: 327 YNNNYNNYNKHNYNKLYYNINY 348
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.8 bits (49), Expect = 0.78
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 338 FKENRNIHTPHGYVQKYYNVLY 403
+ N N + H Y + YYN+ Y
Sbjct: 327 YNNNYNNYNKHNYNKLYYNINY 348
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 20.2 bits (40), Expect = 9.6
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 6 FGTRVNFS*IINATKRKTNQ 65
FG V+FS + A KTN+
Sbjct: 585 FGVGVSFSAVYGALLTKTNR 604
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.2 bits (40), Expect = 9.6
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 6 FGTRVNFS*IINATKRKTNQ 65
FG V+FS + A KTN+
Sbjct: 675 FGVGVSFSAVYGALLTKTNR 694
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,837
Number of Sequences: 438
Number of extensions: 2444
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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