Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_C06
(553 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces ... 108 5e-25
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 99 2e-22
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 93 3e-20
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 67 1e-12
SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme Fub2|Schiz... 27 2.4
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 26 3.2
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 25 5.6
SPBC1773.16c |||transcription factor |Schizosaccharomyces pombe|... 25 5.6
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 25 7.4
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 25 9.8
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 9.8
>SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 108 bits (260), Expect = 5e-25
Identities = 58/187 (31%), Positives = 104/187 (55%), Gaps = 6/187 (3%)
Frame = +3
Query: 9 GLPARGKSQLAHRLARHLNWNGESTKVFDCSEYRRRHMALYGSHD---IFRADNQQGSAI 179
GLPARGKS + ++L R+ NW + K F+ +RR+H + SHD F N++ S +
Sbjct: 3 GLPARGKSYIVNKLVRYYNWLQYNCKAFNVGNFRRKHAS--HSHDDASFFDPSNEEASKL 60
Query: 180 RRQSAREAVQDAVLWLKDGNS-VAIFDGTNITREQRRELSEYCLVDMGFRILFIECYCEE 356
R A + + + W ++ + V IFD TN T ++R+ + ++ LFIE C +
Sbjct: 61 RESFAMDTLDALLQWFEEEDGVVGIFDATNSTSKRRKAIVDHLSKVPYVTTLFIESICND 120
Query: 357 QSLLETNIIEILHYSADYKSMSEEEAVDDLRKKLEHYMRQYEPIEAGSESIS--YVRVEN 530
+ L+ N + + DYK ++ E+++ D ++++ Y R+YEP+ E ++ Y++V N
Sbjct: 121 EQLIAAN-MRMKLVGPDYKDLNPEQSLRDFQERVRMYERKYEPLGKSEEDLNLRYIKVIN 179
Query: 531 MGETVTA 551
+G+ V A
Sbjct: 180 VGKKVVA 186
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 99 bits (238), Expect = 2e-22
Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 6/182 (3%)
Frame = +3
Query: 9 GLPARGKSQLAHRLARHLNWNGESTKVFDCSEYRRRHMA-LYG-SHDIFRADNQQGSAIR 182
G+PA GKS + +L+R+ NW + + F + RR A Y S D F N++ R
Sbjct: 150 GIPATGKSYIGSKLSRYYNWLKYNCRFFSVGDKRREEGASTYSMSADFFDIKNEETFKFR 209
Query: 183 RQSAREAVQDAVLWLKDGNSV-AIFDGTNITREQRRELSEYCLVDMGFRILFIECYCEEQ 359
A E ++D + W+ N V I D TN T E+R+ L + + I+F+E C +
Sbjct: 210 ENVALETLEDLLHWMIHENGVIGILDATNSTHERRKHLYDRISKEADIGIMFLESLCTDD 269
Query: 360 SLLETNIIEILHYSADYKSMSEEEAVDDLRKKLEHYMRQYEPIEAGSES---ISYVRVEN 530
L E NI ++ DY+ E A+ DLR++++ Y + YEP++ E + YV+V N
Sbjct: 270 ILFEENI-KLKIKGPDYEGYDTESALKDLRERVDLYKKYYEPLDERDEQLPFLQYVKVIN 328
Query: 531 MG 536
+G
Sbjct: 329 VG 330
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 92.7 bits (220), Expect = 3e-20
Identities = 55/182 (30%), Positives = 95/182 (52%), Gaps = 1/182 (0%)
Frame = +3
Query: 9 GLPARGKSQLAHRLARHLNWNGESTKVFDCSEYRRRHMALYGSHDIFRADNQQGSAIRRQ 188
GLPARGKS +A + R+L W G + + + ++Y S + A ++ R
Sbjct: 59 GLPARGKSNIAVSIDRYLRWLGFNCRFYSLAKYIDERTREMTSSPVKSAASENHVFSRND 118
Query: 189 SAREAVQDAVLWL-KDGNSVAIFDGTNITREQRRELSEYCLVDMGFRILFIECYCEEQSL 365
+ + D ++L K+ VAI+D TN TR RR L + + GF+ILFIE C ++ +
Sbjct: 119 TIERCLADLEIFLLKEKGQVAIYDATNGTRRTRRILYDR-FKNCGFKILFIESLCNKEDV 177
Query: 366 LETNIIEILHYSADYKSMSEEEAVDDLRKKLEHYMRQYEPIEAGSESISYVRVENMGETV 545
+ NI E +H S ++++ E A + ++++ YE I+ + S+V++ N ET+
Sbjct: 178 INANIQEAIHVSEEFRNWDLEMAEKEYCRRIDILKCHYETID--EKDYSFVKMINFAETI 235
Query: 546 TA 551
A
Sbjct: 236 IA 237
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 67.3 bits (157), Expect = 1e-12
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 1/177 (0%)
Frame = +3
Query: 9 GLPARGKSQLAHRLARHLNWNGESTKVFDCSEYRRRHMALYGSHDIFRADNQQGSAIRRQ 188
GLPA GK+ A +L+R+L W ST ++D E D ++N +
Sbjct: 16 GLPASGKTSSAMKLSRYLTWMSVSTHLYDTKEI-----------DNSLSENSNSDSENLA 64
Query: 189 SAREAVQDAVLWL-KDGNSVAIFDGTNITREQRRELSEYCLVDMGFRILFIECYCEEQSL 365
+ D + + K G VAI D T + R+ + E ++F+E C Q +
Sbjct: 65 KTLSPIFDNLESVFKKGTDVAILDFNQCTLKFRKSIVELAKA-RNMLLMFVEVVCTNQKI 123
Query: 366 LETNIIEILHYSADYKSMSEEEAVDDLRKKLEHYMRQYEPIEAGSESISYVRVENMG 536
++ NI ++ +S +KS EE+ + + + Y + Y P+ + +E ++VR+ + G
Sbjct: 124 IDENITDMCQHSPYFKSFPFEESKNKILDSIHEYEKHYTPL-SEAEECTFVRIVDFG 179
>SPBC16H5.03c |fub2|uba2|SUMO E1-like activator enzyme
Fub2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/78 (21%), Positives = 29/78 (37%)
Frame = +3
Query: 243 VAIFDGTNITREQRRELSEYCLVDMGFRILFIECYCEEQSLLETNIIEILHYSADYKSMS 422
+ I + + +L L R+L E C+ T +L + K+M+
Sbjct: 389 LCITQAIKVLQGDLNDLKNIYLAKRPTRVLHCEKTCKPNPYCPTCSFVLLQLGVNDKNMT 448
Query: 423 EEEAVDDLRKKLEHYMRQ 476
VDD+ K HY +
Sbjct: 449 LRVLVDDILKSRLHYSEE 466
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 26.2 bits (55), Expect = 3.2
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +3
Query: 267 ITREQRRELSEYCLVDMG-FRILFIEC-YCEEQSLLETNIIEILHYSADYKSMSEEEAVD 440
+ E + Y L D F + F E Y +++E + + +Y+ M A+D
Sbjct: 1251 LAEESEKNARNYDLFDDSIFSMSFAELKYTALSNIVEMEKLGFANRRNNYQDMVNSIALD 1310
Query: 441 DLRKKLEHYMRQYEPIEAGSESISYVR 521
+R K M++ ++AG +S+ +R
Sbjct: 1311 -IRNKSRRRMQRQRELDAGHQSLLNLR 1336
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 25.4 bits (53), Expect = 5.6
Identities = 26/81 (32%), Positives = 38/81 (46%)
Frame = +3
Query: 93 DCSEYRRRHMALYGSHDIFRADNQQGSAIRRQSAREAVQDAVLWLKDGNSVAIFDGTNIT 272
DC +RRR+ L GS + QQ S +RR A + L + + I D + +
Sbjct: 594 DCPYWRRRYFQLIGSKLV---AFQQFSKVRR---------ATIDLSE--ATHIVDDNHYS 639
Query: 273 REQRRELSEYCLVDMGFRILF 335
E+ EL Y + GFRI+F
Sbjct: 640 DEE--ELEGYLYFESGFRIIF 658
>SPBC1773.16c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 595
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 173 RYTQAECTRGRTRRSTMA*GWEQCRYIRWDKYNSRAA 283
R + C T ++ M G E+CRY++ K+++RAA
Sbjct: 12 RRKKLRCNGELTCQNCMVYG-EECRYVKRVKHDNRAA 47
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 25.0 bits (52), Expect = 7.4
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = -2
Query: 546 LPSLPYSRRARN*STLTQLRSVHIASCNVPTSFSDHRLLPLHSYS 412
LPSL R ++ STL++ S+H+ S + P S H L +SY+
Sbjct: 135 LPSLS-RRNSKKSSTLSRSISLHLRSESAPISLPIH-LYKSYSYN 177
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 261 TNITREQRRELSEYCLVDMGFRILFIECYCEEQSL 365
T+ T EQ EL+E + + G +LF E EE+++
Sbjct: 210 TDYTVEQEEELNEEGVNESGVPVLFNEADEEEEAV 244
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 24.6 bits (51), Expect = 9.8
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +3
Query: 291 LSEYCLVDMGFRILFIECYCEEQSLLETNIIEIL 392
L EYC+V F + C LL N+ E++
Sbjct: 756 LDEYCMVQYTDHFYFRDHLCVATELLGKNLYELI 789
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,314,050
Number of Sequences: 5004
Number of extensions: 45909
Number of successful extensions: 135
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -