Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0013_C06
(553 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical... 149 1e-36
AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical... 149 1e-36
U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical pr... 136 7e-33
Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical pr... 28 3.9
U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 27 9.0
Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical p... 27 9.0
Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 27 9.0
Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical pr... 27 9.0
U29378-1|AAA68724.1| 168|Caenorhabditis elegans Hypothetical pr... 27 9.0
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 27 9.0
>AC006708-18|AAF60424.2| 450|Caenorhabditis elegans Hypothetical
protein Y110A7A.6a protein.
Length = 450
Score = 149 bits (361), Expect = 1e-36
Identities = 78/187 (41%), Positives = 121/187 (64%), Gaps = 9/187 (4%)
Frame = +3
Query: 9 GLPARGKSQLAHRLARHLNWNGESTKVFDCSEYRRR--HMALYGSHDIFRADNQQGSAIR 182
GLPARGK+ ++H+L R+LNW G TK F+ EYRRR ++ G ++ F +N +G IR
Sbjct: 36 GLPARGKTYISHKLCRYLNWIGIKTKAFNVGEYRRRACNLEEEGENEFFSPNNARGQKIR 95
Query: 183 RQSAREAVQDAVLWL--KDGNSVAIFDGTNITREQRRELSEYC---LVDMGFRILFIECY 347
+ A+ A++D +L K+G VAI D TN TR++R+ L E+C + + FR+ F+E
Sbjct: 96 DECAKLAIEDMGRYLDNKEG-EVAILDATNTTRDRRKLLMEFCRNMMHEPPFRVFFVESV 154
Query: 348 CEEQSLLETNIIEILHYSADYKS-MSEEEAVDDLRKKLEHYMRQYEPI-EAGSESISYVR 521
C++ ++ +NI E+ S DYK MS+EEA +D K++E+Y QYEP+ E E +SY++
Sbjct: 155 CDDPDIINSNITEVKINSPDYKGIMSQEEAKEDFLKRIENYRMQYEPLDEDHDEELSYIK 214
Query: 522 VENMGET 542
V N G++
Sbjct: 215 VINAGKS 221
>AC006708-17|AAK68884.2| 435|Caenorhabditis elegans Hypothetical
protein Y110A7A.6b protein.
Length = 435
Score = 149 bits (361), Expect = 1e-36
Identities = 78/187 (41%), Positives = 121/187 (64%), Gaps = 9/187 (4%)
Frame = +3
Query: 9 GLPARGKSQLAHRLARHLNWNGESTKVFDCSEYRRR--HMALYGSHDIFRADNQQGSAIR 182
GLPARGK+ ++H+L R+LNW G TK F+ EYRRR ++ G ++ F +N +G IR
Sbjct: 42 GLPARGKTYISHKLCRYLNWIGIKTKAFNVGEYRRRACNLEEEGENEFFSPNNARGQKIR 101
Query: 183 RQSAREAVQDAVLWL--KDGNSVAIFDGTNITREQRRELSEYC---LVDMGFRILFIECY 347
+ A+ A++D +L K+G VAI D TN TR++R+ L E+C + + FR+ F+E
Sbjct: 102 DECAKLAIEDMGRYLDNKEG-EVAILDATNTTRDRRKLLMEFCRNMMHEPPFRVFFVESV 160
Query: 348 CEEQSLLETNIIEILHYSADYKS-MSEEEAVDDLRKKLEHYMRQYEPI-EAGSESISYVR 521
C++ ++ +NI E+ S DYK MS+EEA +D K++E+Y QYEP+ E E +SY++
Sbjct: 161 CDDPDIINSNITEVKINSPDYKGIMSQEEAKEDFLKRIENYRMQYEPLDEDHDEELSYIK 220
Query: 522 VENMGET 542
V N G++
Sbjct: 221 VINAGKS 227
>U41558-2|AAK39245.2| 457|Caenorhabditis elegans Hypothetical
protein K02B2.1 protein.
Length = 457
Score = 136 bits (330), Expect = 7e-33
Identities = 70/186 (37%), Positives = 116/186 (62%), Gaps = 8/186 (4%)
Frame = +3
Query: 9 GLPARGKSQLAHRLARHLNWNGESTKVFDCSEYRRRHM----ALYGSH-DIFRADNQQGS 173
GLPARGK+ ++ +L R+L W G +TKVF+ EYRR A++G++ F +N
Sbjct: 36 GLPARGKTYISKKLCRYLKWTGFTTKVFNVGEYRRSDANAADAIHGANASFFSPNNADAL 95
Query: 174 AIRRQSAREAVQDAVLWLKDG-NSVAIFDGTNITREQRRELSEYCLVDMGFRILFIECYC 350
+R +SAR A++D +L G VAIFD TN T+++RR + ++C R FIE C
Sbjct: 96 KVRAESARRAMEDMADYLNSGTGGVAIFDATNTTKDRRRIIIDFC-KKQRLRCFFIESVC 154
Query: 351 EEQSLLETNIIEILHYSADYKS-MSEEEAVDDLRKKLEHYMRQYEPI-EAGSESISYVRV 524
++ ++++ N+ ++ S DYK M+ E+A +D ++E+Y +QYEP+ E+ ES+S+++V
Sbjct: 155 DDPAIIDCNVTDVKVNSPDYKGLMTAEQAKEDFMNRIENYKKQYEPLDESEDESLSFIKV 214
Query: 525 ENMGET 542
N G +
Sbjct: 215 INAGRS 220
>Z78542-2|CAB01744.2| 641|Caenorhabditis elegans Hypothetical
protein F20D1.2 protein.
Length = 641
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -1
Query: 295 LSSLRCSRVIFVPSNIATLFPSLSHSTASCTASRALCLRIADP 167
L SL CS ++ + ATLF S S ST SC L + DP
Sbjct: 170 LESLHCSPSMYTKNWFATLFSS-SMSTESCHELWKLYIEQGDP 211
>U00052-1|AAK95880.2| 308|Caenorhabditis elegans Hypothetical
protein K02F3.5 protein.
Length = 308
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 342 CYCEEQ-SLLETNIIEILHYSADYKSMSEEEAVDDLRKKLEHYMRQYEPI 488
C C LE + L+ + E+ V DLRK+ E +R+YE I
Sbjct: 121 CNCNHDIEALEAKFDKKLYEVKMHAQYETEKGVGDLRKQFETDLREYERI 170
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +1
Query: 175 LYAGRVHARPYKTQYYGLRMGTVSLYSMGQ--I*LASSEGS*AS---IVSWIWALEFCSS 339
+Y+GR+ + T ++ + MG+++L GQ + ++ G+ AS ++ I ++ S+
Sbjct: 312 VYSGRLESGTVLTVFFSVMMGSMALGQAGQQFATIGTALGAAASLYEVIDRIPEIDAYST 371
Query: 340 NAIARNKVF*RLTSSKSSTTQPITRV*VK 426
+K+ R++ +K T P TR VK
Sbjct: 372 EGQTPSKISGRISVNKVEFTYP-TRADVK 399
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/89 (25%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +1
Query: 175 LYAGRVHARPYKTQYYGLRMGTVSLYSMGQ--I*LASSEGS*AS---IVSWIWALEFCSS 339
+Y+GR+ + T ++ + MG+++L GQ + ++ G+ AS ++ I ++ S+
Sbjct: 312 VYSGRLESGTVLTVFFSVMMGSMALGQAGQQFATIGTALGAAASLYEVIDRIPEIDAYST 371
Query: 340 NAIARNKVF*RLTSSKSSTTQPITRV*VK 426
+K+ R++ +K T P TR VK
Sbjct: 372 EGQTPSKISGRISVNKVEFTYP-TRADVK 399
>Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical
protein C07A9.3c protein.
Length = 893
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 492 LRSVHIASCNVPTSFSDHRLLPLHSYSCNRLSSGGF 385
+R + AS + F+DHRLL N L GGF
Sbjct: 560 VRELKRASNESASQFNDHRLLHKRYLMLNLLGKGGF 595
>Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 492 LRSVHIASCNVPTSFSDHRLLPLHSYSCNRLSSGGF 385
+R + AS + F+DHRLL N L GGF
Sbjct: 627 VRELKRASNESASQFNDHRLLHKRYLMLNLLGKGGF 662
>Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 492 LRSVHIASCNVPTSFSDHRLLPLHSYSCNRLSSGGF 385
+R + AS + F+DHRLL N L GGF
Sbjct: 627 VRELKRASNESASQFNDHRLLHKRYLMLNLLGKGGF 662
>U29378-1|AAA68724.1| 168|Caenorhabditis elegans Hypothetical
protein F08C6.5 protein.
Length = 168
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 304 VSWIWALEFCSSNAIARNKVF*RLTSSKSSTTQPIT 411
V W W + F +S++IA +F +T ++ QP T
Sbjct: 64 VKWSWQVLFLASDSIAVISLFYGITRQHAAFLQPFT 99
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 492 LRSVHIASCNVPTSFSDHRLLPLHSYSCNRLSSGGF 385
+R + AS + F+DHRLL N L GGF
Sbjct: 627 VRELKRASNESASQFNDHRLLHKRYLMLNLLGKGGF 662
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,689,896
Number of Sequences: 27780
Number of extensions: 254768
Number of successful extensions: 879
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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