Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_C06
         (553 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              27   0.13 
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   1.6  
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    22   3.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.8  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   8.3  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   8.3  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   8.3  

>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = +3

Query: 255 DGTNITREQRRELSEYCLVDMGFRILFIECYCEEQSLLETNIIEILHYSADYKSMSE 425
           DG N      RE++E  L + G   L  EC     + L     ++L     YK++ E
Sbjct: 75  DGGNFNEVVIREIAEIFLDENGVNKLITECSAISDADLAVKSAKLLKCIGKYKTLKE 131


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 14/57 (24%), Positives = 24/57 (42%)
 Frame = +3

Query: 255 DGTNITREQRRELSEYCLVDMGFRILFIECYCEEQSLLETNIIEILHYSADYKSMSE 425
           DG N      RE++E  L +     L  EC     + +     +++   A YK++ E
Sbjct: 75  DGGNFNEVVVREIAEIYLDENEVNKLITECSAISDADIHLKSSKLIKCFAKYKTLKE 131


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 233 WEQCRYIRWDKYNSRA 280
           W Q R ++W K N+RA
Sbjct: 55  WFQNRRMKWKKENARA 70


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 78  STKVFDCSEYRRRHMALYGSHDIFRADN 161
           +TK F  SEY   ++   G  DIF  ++
Sbjct: 280 NTKPFMKSEYGANNVQYQGVQDIFNTES 307


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 48  LARHLNWNGESTKVFDCSEYRR 113
           L+ + N+N  + K   C+ YR+
Sbjct: 85  LSNNYNYNNNNYKKLYCNNYRK 106


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +3

Query: 366 LETNIIEILHYSADYKSMSEEEAVDDLRKKLEHYMRQY 479
           ++ NI    ++   +K +  E+   DLR + +    QY
Sbjct: 1   MKRNISNYSYHDEKFKQLRNEDNKIDLRSRTKEERLQY 38


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -3

Query: 461 FQLLSQIIDCFLFTHTLVI 405
           + LLS I+ C+L T  LV+
Sbjct: 696 YVLLSGILLCYLVTFALVL 714


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,663
Number of Sequences: 438
Number of extensions: 3092
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)