Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0013_C05
         (417 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.45 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.2  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   4.2  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   7.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   7.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   9.7  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    20   9.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.45
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 348 QASSAAGATSVLHAERHMRAAEQPCRSPAGTPMSGSFHQLIAS 220
           +AS +A   ++L    +  A+   C S  G P S +F Q  A+
Sbjct: 871 EASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFAT 913



 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +3

Query: 54  HLPSTARRQQHRP 92
           HL STA +  HRP
Sbjct: 150 HLQSTAVQDHHRP 162


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 18/47 (38%), Positives = 20/47 (42%)
 Frame = +1

Query: 157 TSQYRGGVATVSFVTRPPFKQAGD*LVERTRHGGAGWGTTRLFCSPH 297
           T +YR G      VT P F  A    V     GGAG G  R +  PH
Sbjct: 573 TLEYRNGE-----VTTPLFTPAVG--VAAASAGGAGGGGARSYVDPH 612


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 97  CHGRCCCRRAVD 62
           CH RC  R A+D
Sbjct: 481 CHARCIARLALD 492


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 97  CHGRCCCRRAVD 62
           CH RC  R A+D
Sbjct: 481 CHARCIARLALD 492


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 5   ISRRPTLRRVLTKFD 49
           I+ RPT   V+TK D
Sbjct: 297 ITERPTTNEVITKID 311


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 177 SRHSLVCYAASFQTSWRLT 233
           S ++LV Y+ +   SWR+T
Sbjct: 195 SGYALVVYSWAKNDSWRIT 213


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -3

Query: 184 WRLLLGIDWL 155
           WR   G+DWL
Sbjct: 571 WRYWQGVDWL 580


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 9   RVAPRCAGCLPSSIKHLPSTARRQQHRP 92
           R A    G  PS+   LP +    QH P
Sbjct: 296 RSACHSPGVYPSTAGFLPPSYHPHQHHP 323


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 181 RLLLGIDWLFSSTFCF 134
           RLL+   W+ S   CF
Sbjct: 183 RLLVATVWILSFVICF 198


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 47  DKTSSIHRTSTATSAMTLDRERPTALSRS 133
           ++TS  H  +  T     DR+RP + + S
Sbjct: 865 EQTSISHENNQPTMNKCSDRKRPASQATS 893


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,196
Number of Sequences: 438
Number of extensions: 2605
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10626762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)